| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460853
Identifier: 77460853
GI number: 77460853
Start: 5231317
End: 5232063
Strand: Direct
Name: 77460853
Synonym: Pfl01_4632
Alternate gene names: NA
Gene position: 5231317-5232063 (Clockwise)
Preceding gene: 77460851
Following gene: 77460854
Centisome position: 81.25
GC content: 60.11
Gene sequence:
>747_bases ATGGAGTTTCTGCGTTTTCTGGCATTTGTCGCGGCCTGGGGTTTCATGTGGCGCTGGGTGGTGAAAAACCGCGGCAGCTG GAATCTGTTTTACGCCAACCTGGTCGGTGTCGCGGGCGGTTTCATTGTTTCGATGGTTGTGCTGGCGATCACTTTTTCAC TGTTCCCGTCGGCGCATCGCTACGAAGCCGCGCAGACTGAAAACGTCGTGGCGCAGCGGGAAGCCGAGCCGACCTCGTTG CTGCCGGAAGCCGAGGCGGTTGCGAGCCCTGCTGCGCTGAAAGATGCGCCGGTGTTTGCCGCTATCGTGCCGGACAACAA GCCCTCTCCAGCGGATTCCGCGTTGCTGCCGAACTACGCCAGTCGGGCGCCGAAGACGATGTCGGTGCAAACCGTAATCG ACCAGAGTGACGATGAGGGGCGCAAGGCCCTGACGGCGCTGAGCAAAAAACTGCGCGCCGACGCCCACGGCGACAAATCG ATGCTCGCGTATGTCATGTGCAGCCCGTTCGTGACCAGCACATTGCGCTTCCCCGCATCTGCCCGGTTTGCCGACAGCAA AAGCCTGACGCCGCAACGCTTCAAGGATCAGGTCTACACCTTCAGCAACACCGTCACCGCGCGGAACATGAATGGCGACG ATGTGACGTACCGTTTCGACTGCTCCGTACAGGAACAGCCAAGAGTCGATGCGACGCCTGCCGAATGGCGCCTGTTGGCG TTGAAGCTGGAAAAAACGGGCTCTTAA
Upstream 100 bases:
>100_bases GCGCGAAGCTACTATTTTGTTATCTTGCCGTCCATCGTCAGTAGTCAATCTGCGCGACGCACTGATTTCAGTTTTTTTGC AGGATTAAGGAAAGGATCGA
Downstream 100 bases:
>100_bases GCCTGGTTTAAGGGTTCGAGGCGCCGGCTGCGCTATCATCGCCGGCCTGTGCGCCTTGAGCTTTTCCCCCGATGCCTCCG ACACCTGATGACCTGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MEFLRFLAFVAAWGFMWRWVVKNRGSWNLFYANLVGVAGGFIVSMVVLAITFSLFPSAHRYEAAQTENVVAQREAEPTSL LPEAEAVASPAALKDAPVFAAIVPDNKPSPADSALLPNYASRAPKTMSVQTVIDQSDDEGRKALTALSKKLRADAHGDKS MLAYVMCSPFVTSTLRFPASARFADSKSLTPQRFKDQVYTFSNTVTARNMNGDDVTYRFDCSVQEQPRVDATPAEWRLLA LKLEKTGS
Sequences:
>Translated_248_residues MEFLRFLAFVAAWGFMWRWVVKNRGSWNLFYANLVGVAGGFIVSMVVLAITFSLFPSAHRYEAAQTENVVAQREAEPTSL LPEAEAVASPAALKDAPVFAAIVPDNKPSPADSALLPNYASRAPKTMSVQTVIDQSDDEGRKALTALSKKLRADAHGDKS MLAYVMCSPFVTSTLRFPASARFADSKSLTPQRFKDQVYTFSNTVTARNMNGDDVTYRFDCSVQEQPRVDATPAEWRLLA LKLEKTGS >Mature_248_residues MEFLRFLAFVAAWGFMWRWVVKNRGSWNLFYANLVGVAGGFIVSMVVLAITFSLFPSAHRYEAAQTENVVAQREAEPTSL LPEAEAVASPAALKDAPVFAAIVPDNKPSPADSALLPNYASRAPKTMSVQTVIDQSDDEGRKALTALSKKLRADAHGDKS MLAYVMCSPFVTSTLRFPASARFADSKSLTPQRFKDQVYTFSNTVTARNMNGDDVTYRFDCSVQEQPRVDATPAEWRLLA LKLEKTGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27312; Mature: 27312
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLRFLAFVAAWGFMWRWVVKNRGSWNLFYANLVGVAGGFIVSMVVLAITFSLFPSAHR CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH YEAAQTENVVAQREAEPTSLLPEAEAVASPAALKDAPVFAAIVPDNKPSPADSALLPNYA HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCHH SRAPKTMSVQTVIDQSDDEGRKALTALSKKLRADAHGDKSMLAYVMCSPFVTSTLRFPAS HCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC ARFADSKSLTPQRFKDQVYTFSNTVTARNMNGDDVTYRFDCSVQEQPRVDATPAEWRLLA CCCCCCCCCCHHHHHHHHHEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE LKLEKTGS EEECCCCC >Mature Secondary Structure MEFLRFLAFVAAWGFMWRWVVKNRGSWNLFYANLVGVAGGFIVSMVVLAITFSLFPSAHR CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH YEAAQTENVVAQREAEPTSLLPEAEAVASPAALKDAPVFAAIVPDNKPSPADSALLPNYA HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCHH SRAPKTMSVQTVIDQSDDEGRKALTALSKKLRADAHGDKSMLAYVMCSPFVTSTLRFPAS HCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC ARFADSKSLTPQRFKDQVYTFSNTVTARNMNGDDVTYRFDCSVQEQPRVDATPAEWRLLA CCCCCCCCCCHHHHHHHHHEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE LKLEKTGS EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA