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The map label for this gene is 77460824

Identifier: 77460824

GI number: 77460824

Start: 5204778

End: 5205536

Strand: Reverse

Name: 77460824

Synonym: Pfl01_4603

Alternate gene names: NA

Gene position: 5205536-5204778 (Counterclockwise)

Preceding gene: 77460825

Following gene: 77460823

Centisome position: 80.85

GC content: 58.5

Gene sequence:

>759_bases
ATGTCCCTGCGCTTTGCGCTGCTGTTGCTGTTGGCCAGCCTGTGTGCTGGTTGTGTCCTGTCGGGCGACTACAACCCGAT
GAAGACCAGCAAGGGCCGTGACGAAGCGCGAGCTGCCTACGTGCAGCTGGGATTGGGATACTTGCAGCAGGGCATGACCG
AACGGGCCAAGGTTCCACTGAAGAAAGCCTTGGAGCTGGACGGGTCGGATCCCGACGCCAACGCCGCGCTGGGGCTGGTG
TTCCAGGCCGAAATGGAACCTGGGCTTGCTGACGAACACTTCCGCAAAGCCTTGTCCTCCCGTCCCGCCGATGCGCGCAT
CCTCAACAACTACGGCAGTTTTCTCTACGAAGAACAGCGTTACAAGGAAGCCTACGAGCGTTTTGAACAGGCGGCCGCCG
ATACCCTGTATCCTGAGCGTTCGCGGGTGTTCGAGAACCTCGGCATGACGGCGGCAAAGCTCGGTCAGCGTGATCTGGCG
CAGCAGCAGCTGGAAAAGGCGCTGCGTTTGAACCGCCAGCAGCCACGGGCATTGCTGGAAATGGCTGAGTTGTCATTCGA
AGACAGGCATTATGTGCCCGCGCGTGACTATTACGACCGTTTCAGCCAGCTCTCCGAGCAAAATGCACGTAGTCTGTTGC
TCGCCGTTCGGTTGGCAAAAGTATTTGAAGATCGCGACAAGGCCGCCAGTGCGGGCCTGCAATTAAAACGACTCTATCCC
GGTACGCCGGAATATCAGCAATACCTGTCGGAGCAATGA

Upstream 100 bases:

>100_bases
TCGCACCCGTCGCAGCGAACGTTACATCGCCGTCCGCGAATTGAGCGCCGACAGCGATCTGGCACAGAACGCCGCGAACA
CTAACTAAGAGAGGATCTCT

Downstream 100 bases:

>100_bases
TGAAAGCGGCGCATCCCGAAGTTGTAGCAGCGAATCGCGTTAACCCCGGTGAGACCCTGCGCCAGGCCCGCGAAAGCAAT
GGCTGGTCGCTGGCCGAAGT

Product: Type IV pilus biogenesis protein PilF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSLRFALLLLLASLCAGCVLSGDYNPMKTSKGRDEARAAYVQLGLGYLQQGMTERAKVPLKKALELDGSDPDANAALGLV
FQAEMEPGLADEHFRKALSSRPADARILNNYGSFLYEEQRYKEAYERFEQAAADTLYPERSRVFENLGMTAAKLGQRDLA
QQQLEKALRLNRQQPRALLEMAELSFEDRHYVPARDYYDRFSQLSEQNARSLLLAVRLAKVFEDRDKAASAGLQLKRLYP
GTPEYQQYLSEQ

Sequences:

>Translated_252_residues
MSLRFALLLLLASLCAGCVLSGDYNPMKTSKGRDEARAAYVQLGLGYLQQGMTERAKVPLKKALELDGSDPDANAALGLV
FQAEMEPGLADEHFRKALSSRPADARILNNYGSFLYEEQRYKEAYERFEQAAADTLYPERSRVFENLGMTAAKLGQRDLA
QQQLEKALRLNRQQPRALLEMAELSFEDRHYVPARDYYDRFSQLSEQNARSLLLAVRLAKVFEDRDKAASAGLQLKRLYP
GTPEYQQYLSEQ
>Mature_251_residues
SLRFALLLLLASLCAGCVLSGDYNPMKTSKGRDEARAAYVQLGLGYLQQGMTERAKVPLKKALELDGSDPDANAALGLVF
QAEMEPGLADEHFRKALSSRPADARILNNYGSFLYEEQRYKEAYERFEQAAADTLYPERSRVFENLGMTAAKLGQRDLAQ
QQLEKALRLNRQQPRALLEMAELSFEDRHYVPARDYYDRFSQLSEQNARSLLLAVRLAKVFEDRDKAASAGLQLKRLYPG
TPEYQQYLSEQ

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28544; Mature: 28413

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRFALLLLLASLCAGCVLSGDYNPMKTSKGRDEARAAYVQLGLGYLQQGMTERAKVPL
CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KKALELDGSDPDANAALGLVFQAEMEPGLADEHFRKALSSRPADARILNNYGSFLYEEQR
HHHHHCCCCCCCCCHHHHHHEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YKEAYERFEQAAADTLYPERSRVFENLGMTAAKLGQRDLAQQQLEKALRLNRQQPRALLE
HHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MAELSFEDRHYVPARDYYDRFSQLSEQNARSLLLAVRLAKVFEDRDKAASAGLQLKRLYP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHCCC
GTPEYQQYLSEQ
CCHHHHHHHCCC
>Mature Secondary Structure 
SLRFALLLLLASLCAGCVLSGDYNPMKTSKGRDEARAAYVQLGLGYLQQGMTERAKVPL
CHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KKALELDGSDPDANAALGLVFQAEMEPGLADEHFRKALSSRPADARILNNYGSFLYEEQR
HHHHHCCCCCCCCCHHHHHHEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YKEAYERFEQAAADTLYPERSRVFENLGMTAAKLGQRDLAQQQLEKALRLNRQQPRALLE
HHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MAELSFEDRHYVPARDYYDRFSQLSEQNARSLLLAVRLAKVFEDRDKAASAGLQLKRLYP
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHCCC
GTPEYQQYLSEQ
CCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]