| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460792
Identifier: 77460792
GI number: 77460792
Start: 5166187
End: 5166681
Strand: Reverse
Name: 77460792
Synonym: Pfl01_4571
Alternate gene names: NA
Gene position: 5166681-5166187 (Counterclockwise)
Preceding gene: 77460795
Following gene: 77460791
Centisome position: 80.25
GC content: 57.37
Gene sequence:
>495_bases ATGTTCAAGAAAATCGCTTTCGCTGCCCCACTGGCTGTTCTGGCTCTGAGCTCTTCCGTGGTCTTCGCCGCCGGTGAAGC ACGTCACTCCATCAGCCTGGTGGCGCATGTGCCAACCAATGGTTTCTATGTGGTGCCAACGGATGCTGACCTGGTCAACA AGGATCAGGACATGAGCTTCAGCCCGATTACCGGAACCATGAAACCCGTGGAAGGTTTCTTCGATGTGCGCAACACCAAC GGTTCGGTTCATGGCTATCTGGAAGGCGTGCCGAAACTGGTCGGCGGCTCAAGCATCATTGATCTCAAAGTCGAGTTCAA TAACAAGGTTCTGACCCAGACCCCGCAAATGGTTGTTGGCGAGGCCGAGTCCGATGTGAACTACCGTGCACCGCTGCGCA TCACCGCCGCCGGCACCAACTTCACCCCGGGCGATTACACCGGCGCAGTCACCATGATGTTCGACGCTGTTCCTCCCGTC GGCGCCGCGCTCTAA
Upstream 100 bases:
>100_bases TGCCCCGGCGTTGAAACTTCAGGTCAATACGGCCCTTGTCGGCTTGAATGACTTGAAAGTTCAACGCTTCGATCCTTTAA AAGAAGACAGGTACTGACCG
Downstream 100 bases:
>100_bases CCCGTGAAGTAACAAAAGCCGGCTGGCTGACGCGAATGTCTGTCAGCCGGACTTTTTTCCGTTCGCAATCAGAGTCCGTG TTCATGTTCCCGATGACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MFKKIAFAAPLAVLALSSSVVFAAGEARHSISLVAHVPTNGFYVVPTDADLVNKDQDMSFSPITGTMKPVEGFFDVRNTN GSVHGYLEGVPKLVGGSSIIDLKVEFNNKVLTQTPQMVVGEAESDVNYRAPLRITAAGTNFTPGDYTGAVTMMFDAVPPV GAAL
Sequences:
>Translated_164_residues MFKKIAFAAPLAVLALSSSVVFAAGEARHSISLVAHVPTNGFYVVPTDADLVNKDQDMSFSPITGTMKPVEGFFDVRNTN GSVHGYLEGVPKLVGGSSIIDLKVEFNNKVLTQTPQMVVGEAESDVNYRAPLRITAAGTNFTPGDYTGAVTMMFDAVPPV GAAL >Mature_164_residues MFKKIAFAAPLAVLALSSSVVFAAGEARHSISLVAHVPTNGFYVVPTDADLVNKDQDMSFSPITGTMKPVEGFFDVRNTN GSVHGYLEGVPKLVGGSSIIDLKVEFNNKVLTQTPQMVVGEAESDVNYRAPLRITAAGTNFTPGDYTGAVTMMFDAVPPV GAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17294; Mature: 17294
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKIAFAAPLAVLALSSSVVFAAGEARHSISLVAHVPTNGFYVVPTDADLVNKDQDMSF CCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCEEEEECCHHHCCCCCCCEE SPITGTMKPVEGFFDVRNTNGSVHGYLEGVPKLVGGSSIIDLKVEFNNKVLTQTPQMVVG CCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHCCCCEEEEEEEEECCEEEECCCCEEEE EAESDVNYRAPLRITAAGTNFTPGDYTGAVTMMFDAVPPVGAAL CCCCCCCEECCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MFKKIAFAAPLAVLALSSSVVFAAGEARHSISLVAHVPTNGFYVVPTDADLVNKDQDMSF CCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCEEEEECCHHHCCCCCCCEE SPITGTMKPVEGFFDVRNTNGSVHGYLEGVPKLVGGSSIIDLKVEFNNKVLTQTPQMVVG CCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHCCCCEEEEEEEEECCEEEECCCCEEEE EAESDVNYRAPLRITAAGTNFTPGDYTGAVTMMFDAVPPVGAAL CCCCCCCEECCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA