| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460795
Identifier: 77460795
GI number: 77460795
Start: 5168561
End: 5169199
Strand: Reverse
Name: 77460795
Synonym: Pfl01_4574
Alternate gene names: NA
Gene position: 5169199-5168561 (Counterclockwise)
Preceding gene: 77460796
Following gene: 77460792
Centisome position: 80.29
GC content: 60.25
Gene sequence:
>639_bases ATGAACGCCGTCTTGCGGCGACGCCTGATCACTTCGGTTGCGGTGCTGGGCTGGGCCGGGCTGGGAATTCAGCTGTACCT GATTTTCTTCGCACGCCTGAGTGTCGGCGCCAGCCTGCTCGGCGGGCTGGTGAGTTTCTTCAGCTATTTCACCGTGCTCA CCAACACCCTGGTGGCGGTGGTGCTGACCTGCGCGGTGACCGATCGTGAATCCACCGCGCGGCGCTGGTTTCTGCAACCT TGGGTCAGCAGTGGAATTGCCGTCAGCATTGCGGTGGTTGGCCTGGCCTACAGCATTCTGCTGCGGCATCTGTGGCATCC GCAGGGCTGGCAGTTTATCGCGGACGAATTGCTCCACGATGTGATGCCGCTGCTGTTTCTGGCTTATTGGTGGTTGTGTG TGCCCAAGGGCAGCTTGCGTCTGAAGCACCTGCCGCTGTGGCTGATCTATCCGCTGGTGTACTTCGCCTATGCATTGCTG CGCGGGCATTTGCTGGGGGCTTACGCGTATCCGTTCATTGACGTGGCACTGCTGGGTTATCCACAGGTGTTCATCAATGC CGGGGGCATTCTGCTGGGGTTTGTGCTGATGGCGTTGCTGGTGATCGGGATTGATCGCTGGCAGGGGCGGCGCCTTTAG
Upstream 100 bases:
>100_bases ATCAAGTCGAGCCTGACCTTTCTGCGCAAGACGCCTTGGGCGCGGGAGAAAGTCGAGCGGCTGTACGTGAAACTGATGCG CACCAAGCGTCCGCTCTGAG
Downstream 100 bases:
>100_bases CAGCGCCGCCGCGCGTATTCACTCCTCTTCGGAGCCCTCGGCGCGCCAGTAACCGACCGCTTTGACGAACTTCTCGTCGA GTCCGTGTTCATCGAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MNAVLRRRLITSVAVLGWAGLGIQLYLIFFARLSVGASLLGGLVSFFSYFTVLTNTLVAVVLTCAVTDRESTARRWFLQP WVSSGIAVSIAVVGLAYSILLRHLWHPQGWQFIADELLHDVMPLLFLAYWWLCVPKGSLRLKHLPLWLIYPLVYFAYALL RGHLLGAYAYPFIDVALLGYPQVFINAGGILLGFVLMALLVIGIDRWQGRRL
Sequences:
>Translated_212_residues MNAVLRRRLITSVAVLGWAGLGIQLYLIFFARLSVGASLLGGLVSFFSYFTVLTNTLVAVVLTCAVTDRESTARRWFLQP WVSSGIAVSIAVVGLAYSILLRHLWHPQGWQFIADELLHDVMPLLFLAYWWLCVPKGSLRLKHLPLWLIYPLVYFAYALL RGHLLGAYAYPFIDVALLGYPQVFINAGGILLGFVLMALLVIGIDRWQGRRL >Mature_212_residues MNAVLRRRLITSVAVLGWAGLGIQLYLIFFARLSVGASLLGGLVSFFSYFTVLTNTLVAVVLTCAVTDRESTARRWFLQP WVSSGIAVSIAVVGLAYSILLRHLWHPQGWQFIADELLHDVMPLLFLAYWWLCVPKGSLRLKHLPLWLIYPLVYFAYALL RGHLLGAYAYPFIDVALLGYPQVFINAGGILLGFVLMALLVIGIDRWQGRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23806; Mature: 23806
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVLRRRLITSVAVLGWAGLGIQLYLIFFARLSVGASLLGGLVSFFSYFTVLTNTLVAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTCAVTDRESTARRWFLQPWVSSGIAVSIAVVGLAYSILLRHLWHPQGWQFIADELLHD HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VMPLLFLAYWWLCVPKGSLRLKHLPLWLIYPLVYFAYALLRGHLLGAYAYPFIDVALLGY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PQVFINAGGILLGFVLMALLVIGIDRWQGRRL HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNAVLRRRLITSVAVLGWAGLGIQLYLIFFARLSVGASLLGGLVSFFSYFTVLTNTLVAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTCAVTDRESTARRWFLQPWVSSGIAVSIAVVGLAYSILLRHLWHPQGWQFIADELLHD HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VMPLLFLAYWWLCVPKGSLRLKHLPLWLIYPLVYFAYALLRGHLLGAYAYPFIDVALLGY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PQVFINAGGILLGFVLMALLVIGIDRWQGRRL HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA