| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is idnK [H]
Identifier: 77460557
GI number: 77460557
Start: 4890344
End: 4890877
Strand: Reverse
Name: idnK [H]
Synonym: Pfl01_4336
Alternate gene names: 77460557
Gene position: 4890877-4890344 (Counterclockwise)
Preceding gene: 77460559
Following gene: 77460556
Centisome position: 75.96
GC content: 63.3
Gene sequence:
>534_bases ATGAATCATCCCATCACCGCCCTGGTCATCATGGGCGTTGCCGGTTGCGGCAAGACGTGCGTCAGCGAGGCCCTGTGCCA ATTGAGCGGCGCCACTGCCATTGAAGGCGATACTTTCCATCCGGCCGCGAACATCGAAAAGATGAGCGCGGGGATCCCCC TGAACGACGAAGACCGTGCCGGCTGGCTCGACAGCCTGTGCGATGAACTGCGTCGCGTCGATGCCCTGGGCGAACGCCCG GTGCTGACTTGCTCGGCCCTCAAGCACAGTTATCGCGAAGTGCTGCGCAGCGCCTTGCCGGGCCTGGGCTTCGTGTTCCT CGAATTGACGCCTGAAGTGGCCGCCGAACGTGTGTCCCACCGTCCGGGCCACTTCATGCCGGCCACCTTGATCGAAAGCC AGTTCGCCACCCTCGAATCGCCCAAGGGCGAGCCGTTGACCCTGGCCCTGAATGCTTCGATCCACAGCGTTGAAGAACTG GCGGCGCAAGCCCACGTCTGGTGGCAGGCCCATGGCCTGAAACAGGCGGTATGA
Upstream 100 bases:
>100_bases CTGCAACCCAAAAAAACGACAAGAAGGCGTCGGCAACTTCTGCCTGTGCACTAGAGTCATAGCTAGCAAAGGTAGCGCTG TCTGCGCGCTGAGGTGTTAC
Downstream 100 bases:
>100_bases GTGTGATTGTGAAGACAGCGCTGTCCTTTCGACTTCTGATTAACCCGCTTTAATAACAACAACAAACCAGGAGACACCCC CTCATGTTTGGCATGTCCCA
Product: gluconate kinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNHPITALVIMGVAGCGKTCVSEALCQLSGATAIEGDTFHPAANIEKMSAGIPLNDEDRAGWLDSLCDELRRVDALGERP VLTCSALKHSYREVLRSALPGLGFVFLELTPEVAAERVSHRPGHFMPATLIESQFATLESPKGEPLTLALNASIHSVEEL AAQAHVWWQAHGLKQAV
Sequences:
>Translated_177_residues MNHPITALVIMGVAGCGKTCVSEALCQLSGATAIEGDTFHPAANIEKMSAGIPLNDEDRAGWLDSLCDELRRVDALGERP VLTCSALKHSYREVLRSALPGLGFVFLELTPEVAAERVSHRPGHFMPATLIESQFATLESPKGEPLTLALNASIHSVEEL AAQAHVWWQAHGLKQAV >Mature_177_residues MNHPITALVIMGVAGCGKTCVSEALCQLSGATAIEGDTFHPAANIEKMSAGIPLNDEDRAGWLDSLCDELRRVDALGERP VLTCSALKHSYREVLRSALPGLGFVFLELTPEVAAERVSHRPGHFMPATLIESQFATLESPKGEPLTLALNASIHSVEEL AAQAHVWWQAHGLKQAV
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=153, Percent_Identity=41.8300653594771, Blast_Score=111, Evalue=4e-25, Organism=Escherichia coli, GI1790719, Length=161, Percent_Identity=40.3726708074534, Blast_Score=129, Evalue=9e-32, Organism=Escherichia coli, GI87082265, Length=140, Percent_Identity=39.2857142857143, Blast_Score=116, Evalue=6e-28, Organism=Caenorhabditis elegans, GI25146487, Length=163, Percent_Identity=42.9447852760736, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6320454, Length=144, Percent_Identity=38.1944444444444, Blast_Score=101, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 19002; Mature: 19002
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPITALVIMGVAGCGKTCVSEALCQLSGATAIEGDTFHPAANIEKMSAGIPLNDEDRA CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCH GWLDSLCDELRRVDALGERPVLTCSALKHSYREVLRSALPGLGFVFLELTPEVAAERVSH HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHC RPGHFMPATLIESQFATLESPKGEPLTLALNASIHSVEELAAQAHVWWQAHGLKQAV CCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure MNHPITALVIMGVAGCGKTCVSEALCQLSGATAIEGDTFHPAANIEKMSAGIPLNDEDRA CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCH GWLDSLCDELRRVDALGERPVLTCSALKHSYREVLRSALPGLGFVFLELTPEVAAERVSH HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHC RPGHFMPATLIESQFATLESPKGEPLTLALNASIHSVEELAAQAHVWWQAHGLKQAV CCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]