| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gnuT [H]
Identifier: 77460556
GI number: 77460556
Start: 4888908
End: 4890260
Strand: Reverse
Name: gnuT [H]
Synonym: Pfl01_4335
Alternate gene names: 77460556
Gene position: 4890260-4888908 (Counterclockwise)
Preceding gene: 77460557
Following gene: 77460554
Centisome position: 75.95
GC content: 62.31
Gene sequence:
>1353_bases ATGTTTGGCATGTCCCATGACGCCTACCTGCTGCTCGATGCAGTGGTTACGGTGATCGGACTCATCGTCCTGATCACCAA GTTCAAGATTCACCCCTTCATTGCCCTGACCATCGCCGCCGCGTTCCTTGGCCTGACGTCCGGCATGCCGATCGGCACGA TCATCAAGGCGTTCCAGGACGGCTTCGGTGGCGTGCTCGGTTTTGTCGGCATCATCCTCGCCCTGGGCACGATGCTCGGC AAGATGATGGCCGAATCCGGTGGTGCCGATCAGATCGCCCAGACCCTGATCCGCGCCTTCGGCAAGGACAAGGTGCAGTG GGCGATGATGTTCGCCGCGTTCCTGGTGGGCATTCCGCTGTTCTTCGAAATCGGCTTCGTGTTGCTGATTCCGCTGGTGT TCATCGTGGCTCGCCGCACTGGTGTGTCGATCATCAAGATCGGTATCCCGCTGCTCGCCGGTCTGTCCGCCGTGCACGGC TTGGTGCCGCCGCACCCGGGCCCGCTGCTGGCCATCGGCGTGTTCGGTGCCGACATCGGCAAGACCATTCTGTACGGTCT GATCGTCGCGCTGCCGACCGCCATCATCGCCGGCCCGATCTTCGGTACGTTCATCGCCAAGCACATTCCCGGTACGCCGA ACCAGGAACTGGTCGATCAACTGGCCCGTGAAAACGATTCGGCCAACCTGCCGAGCTTCAGCATCACCCTGGTCACCGTG CTGCTGCCGGTGTTCCTGATGCTGCTGAAAACCTTCGCTGACGTGGCCCTGCCGGACGGTCATTTCTTCCGCACCTGGAT GGACATGATCGGTCACCCGATCTCGGCACTGCTGCTGGCATTGCTGCTGTCGCTGTACACCTTCGGTCACAAGCAGGGCA TCGGTTCTCAGCAGATGCTCAAATGGCTGGACGCGAGCCTGGCGCCGACCGCGGCAATCATTCTGATCATCGGCGCCGGC GGTGGCTTCAAGCAGATGCTGGTGACCAGCGGCGTGGGCGACGTGATCGGCCACATGGCGGTCAGCGCGCAGATCTCGCC GATCCTGCTGGCGTGGCTGGTGGCGGCGGTGATCCGCATCGCGACCGGTTCGGCCACCGTGGCGACCATCACTGGCGCGG GCATCGTGGTGCCGGTGGTGGGGATGATCCCGGGCGTGAACCGTGAGCTGCTGGTGCTGGCCACCGGTGCCGGTTCGCTG ATCCTGTCCCACGTCAACGACGCCGGTTTCTGGCTGGTGAAGCAGTACTTCAACATGACCGTGGCCGAGACCTTCAAGAC CTGGACGGCGATGGAAACCATCCTGTCGGTGGTGGGGCTGGGCTTTATTCTGTTGTTGTCGCTGTTCGTTTAA
Upstream 100 bases:
>100_bases TGAAACAGGCGGTATGAGTGTGATTGTGAAGACAGCGCTGTCCTTTCGACTTCTGATTAACCCGCTTTAATAACAACAAC AAACCAGGAGACACCCCCTC
Downstream 100 bases:
>100_bases GACTCTCTTCGTTCAAGAAGATGCAGACACAAAAAAACCGCAGTGATGCGGTTTTTTTGTGGGTGCAATTCGCGAGTTAC TTGGTGCCCAGAGCATCCGC
Product: gluconate transporter
Products: gluconate [Cytoplasm]; L-idonate [Cytoplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MFGMSHDAYLLLDAVVTVIGLIVLITKFKIHPFIALTIAAAFLGLTSGMPIGTIIKAFQDGFGGVLGFVGIILALGTMLG KMMAESGGADQIAQTLIRAFGKDKVQWAMMFAAFLVGIPLFFEIGFVLLIPLVFIVARRTGVSIIKIGIPLLAGLSAVHG LVPPHPGPLLAIGVFGADIGKTILYGLIVALPTAIIAGPIFGTFIAKHIPGTPNQELVDQLARENDSANLPSFSITLVTV LLPVFLMLLKTFADVALPDGHFFRTWMDMIGHPISALLLALLLSLYTFGHKQGIGSQQMLKWLDASLAPTAAIILIIGAG GGFKQMLVTSGVGDVIGHMAVSAQISPILLAWLVAAVIRIATGSATVATITGAGIVVPVVGMIPGVNRELLVLATGAGSL ILSHVNDAGFWLVKQYFNMTVAETFKTWTAMETILSVVGLGFILLLSLFV
Sequences:
>Translated_450_residues MFGMSHDAYLLLDAVVTVIGLIVLITKFKIHPFIALTIAAAFLGLTSGMPIGTIIKAFQDGFGGVLGFVGIILALGTMLG KMMAESGGADQIAQTLIRAFGKDKVQWAMMFAAFLVGIPLFFEIGFVLLIPLVFIVARRTGVSIIKIGIPLLAGLSAVHG LVPPHPGPLLAIGVFGADIGKTILYGLIVALPTAIIAGPIFGTFIAKHIPGTPNQELVDQLARENDSANLPSFSITLVTV LLPVFLMLLKTFADVALPDGHFFRTWMDMIGHPISALLLALLLSLYTFGHKQGIGSQQMLKWLDASLAPTAAIILIIGAG GGFKQMLVTSGVGDVIGHMAVSAQISPILLAWLVAAVIRIATGSATVATITGAGIVVPVVGMIPGVNRELLVLATGAGSL ILSHVNDAGFWLVKQYFNMTVAETFKTWTAMETILSVVGLGFILLLSLFV >Mature_450_residues MFGMSHDAYLLLDAVVTVIGLIVLITKFKIHPFIALTIAAAFLGLTSGMPIGTIIKAFQDGFGGVLGFVGIILALGTMLG KMMAESGGADQIAQTLIRAFGKDKVQWAMMFAAFLVGIPLFFEIGFVLLIPLVFIVARRTGVSIIKIGIPLLAGLSAVHG LVPPHPGPLLAIGVFGADIGKTILYGLIVALPTAIIAGPIFGTFIAKHIPGTPNQELVDQLARENDSANLPSFSITLVTV LLPVFLMLLKTFADVALPDGHFFRTWMDMIGHPISALLLALLLSLYTFGHKQGIGSQQMLKWLDASLAPTAAIILIIGAG GGFKQMLVTSGVGDVIGHMAVSAQISPILLAWLVAAVIRIATGSATVATITGAGIVVPVVGMIPGVNRELLVLATGAGSL ILSHVNDAGFWLVKQYFNMTVAETFKTWTAMETILSVVGLGFILLLSLFV
Specific function: Transport Of Gluconate And L-Idonate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=436, Percent_Identity=46.1009174311927, Blast_Score=366, Evalue=1e-102, Organism=Escherichia coli, GI1790716, Length=420, Percent_Identity=42.6190476190476, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI2367370, Length=426, Percent_Identity=41.7840375586854, Blast_Score=318, Evalue=4e-88, Organism=Escherichia coli, GI1788707, Length=448, Percent_Identity=39.5089285714286, Blast_Score=305, Evalue=4e-84, Organism=Escherichia coli, GI1790776, Length=433, Percent_Identity=37.4133949191686, Blast_Score=295, Evalue=4e-81, Organism=Escherichia coli, GI48994939, Length=433, Percent_Identity=39.9538106235566, Blast_Score=292, Evalue=3e-80, Organism=Escherichia coli, GI1789097, Length=443, Percent_Identity=33.8600451467269, Blast_Score=238, Evalue=6e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 47270; Mature: 47270
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGMSHDAYLLLDAVVTVIGLIVLITKFKIHPFIALTIAAAFLGLTSGMPIGTIIKAFQD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GFGGVLGFVGIILALGTMLGKMMAESGGADQIAQTLIRAFGKDKVQWAMMFAAFLVGIPL HCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FFEIGFVLLIPLVFIVARRTGVSIIKIGIPLLAGLSAVHGLVPPHPGPLLAIGVFGADIG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH KTILYGLIVALPTAIIAGPIFGTFIAKHIPGTPNQELVDQLARENDSANLPSFSITLVTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH LLPVFLMLLKTFADVALPDGHFFRTWMDMIGHPISALLLALLLSLYTFGHKQGIGSQQML HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH KWLDASLAPTAAIILIIGAGGGFKQMLVTSGVGDVIGHMAVSAQISPILLAWLVAAVIRI HHHHHCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGSATVATITGAGIVVPVVGMIPGVNRELLVLATGAGSLILSHVNDAGFWLVKQYFNMT HCCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHH VAETFKTWTAMETILSVVGLGFILLLSLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MFGMSHDAYLLLDAVVTVIGLIVLITKFKIHPFIALTIAAAFLGLTSGMPIGTIIKAFQD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GFGGVLGFVGIILALGTMLGKMMAESGGADQIAQTLIRAFGKDKVQWAMMFAAFLVGIPL HCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FFEIGFVLLIPLVFIVARRTGVSIIKIGIPLLAGLSAVHGLVPPHPGPLLAIGVFGADIG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH KTILYGLIVALPTAIIAGPIFGTFIAKHIPGTPNQELVDQLARENDSANLPSFSITLVTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH LLPVFLMLLKTFADVALPDGHFFRTWMDMIGHPISALLLALLLSLYTFGHKQGIGSQQML HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH KWLDASLAPTAAIILIIGAGGGFKQMLVTSGVGDVIGHMAVSAQISPILLAWLVAAVIRI HHHHHCCCCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGSATVATITGAGIVVPVVGMIPGVNRELLVLATGAGSLILSHVNDAGFWLVKQYFNMT HCCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHH VAETFKTWTAMETILSVVGLGFILLLSLFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: gluconate [Periplasm]; Proton [Periplasm]; L-idonate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] Proton [Periplasm] + L-idonate [Periplasm] = L-idonate [Cytoplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]