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The map label for this gene is ycgF [H]

Identifier: 77460554

GI number: 77460554

Start: 4886821

End: 4887483

Strand: Reverse

Name: ycgF [H]

Synonym: Pfl01_4333

Alternate gene names: 77460554

Gene position: 4887483-4886821 (Counterclockwise)

Preceding gene: 77460556

Following gene: 77460553

Centisome position: 75.91

GC content: 61.84

Gene sequence:

>663_bases
ATGGAATTCACCAGCGGCTTCTTGCTGAGCCTTTCGCTGTGCCTGGACATCGGCGTGGCCAACATCGCGATGATCACCGT
GGCGATGCAGCGCGGCTATTTTCAGGGCTTCGCACTAGGCCTCGGCACCTGCGTCGGCGACCTGATCTACGCGGTGCTGG
CGCTGGCCGGAATGACCGTTCTGCTGCAATACGAAACCGTGCGCTGGGTGCTGTGGATCGGCGGTTCGGCGCTGTTGATC
TACTTCGCGGCGAAGATGATCTATTCGGCGATCCACCACGAAGCGCAATTGGCGGCGACCGCCGAAGTGGGCCAGAACTC
CCATCGCAGGGAATTCTTTCGTGGGATTTTTCTGGCCATGTCGTCGCCGAGCGCCATCCTCTGGTTCGCGGCCGTGGGCG
GCACGTTGATCGCCCGCTCCGGTGGCGGCGGTCCTTTGAGCTCGACGCTGTTTCTCGGCGGCTTCCTGTGCGCCGGGCTA
TTGTGGTCGGCAGGCCTGTGCTTCGCCGCGAGCCATGGCGGCAAGTTGCTGGGCGACAAACTGCTGCGCTATTCCTACAT
GGCATCTGCAGCGATCTTCTGCTATTTCGCGGTCTACGTGATCGTATCCGGTTATAACGAGTTCGTCGGTTCCGGCGCCG
CCGAGGCCCTGCATACGCTGTAA

Upstream 100 bases:

>100_bases
CGACGCTGGTCACTGTGGTGACCTGTGGCGGACGATAAGGGCAGCGATGGCAGACTGTCCAGCGCCTTTGTAAACAAATT
TTTCCCAAGGAAATCGGTTA

Downstream 100 bases:

>100_bases
ATGTGCGAATCGGGTTTGGCTTCTATACTCCCAGCCGAACCCACTTTTTTCGTTCAAGGAGTCGAGTCATGGATGAGCAA
AAACGCGTCGAAGTGGCTGA

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MEFTSGFLLSLSLCLDIGVANIAMITVAMQRGYFQGFALGLGTCVGDLIYAVLALAGMTVLLQYETVRWVLWIGGSALLI
YFAAKMIYSAIHHEAQLAATAEVGQNSHRREFFRGIFLAMSSPSAILWFAAVGGTLIARSGGGGPLSSTLFLGGFLCAGL
LWSAGLCFAASHGGKLLGDKLLRYSYMASAAIFCYFAVYVIVSGYNEFVGSGAAEALHTL

Sequences:

>Translated_220_residues
MEFTSGFLLSLSLCLDIGVANIAMITVAMQRGYFQGFALGLGTCVGDLIYAVLALAGMTVLLQYETVRWVLWIGGSALLI
YFAAKMIYSAIHHEAQLAATAEVGQNSHRREFFRGIFLAMSSPSAILWFAAVGGTLIARSGGGGPLSSTLFLGGFLCAGL
LWSAGLCFAASHGGKLLGDKLLRYSYMASAAIFCYFAVYVIVSGYNEFVGSGAAEALHTL
>Mature_220_residues
MEFTSGFLLSLSLCLDIGVANIAMITVAMQRGYFQGFALGLGTCVGDLIYAVLALAGMTVLLQYETVRWVLWIGGSALLI
YFAAKMIYSAIHHEAQLAATAEVGQNSHRREFFRGIFLAMSSPSAILWFAAVGGTLIARSGGGGPLSSTLFLGGFLCAGL
LWSAGLCFAASHGGKLLGDKLLRYSYMASAAIFCYFAVYVIVSGYNEFVGSGAAEALHTL

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23286; Mature: 23286

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFTSGFLLSLSLCLDIGVANIAMITVAMQRGYFQGFALGLGTCVGDLIYAVLALAGMTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQYETVRWVLWIGGSALLIYFAAKMIYSAIHHEAQLAATAEVGQNSHRREFFRGIFLAM
HEEHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SSPSAILWFAAVGGTLIARSGGGGPLSSTLFLGGFLCAGLLWSAGLCFAASHGGKLLGDK
CCCCCEEHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHH
LLRYSYMASAAIFCYFAVYVIVSGYNEFVGSGAAEALHTL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MEFTSGFLLSLSLCLDIGVANIAMITVAMQRGYFQGFALGLGTCVGDLIYAVLALAGMTV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQYETVRWVLWIGGSALLIYFAAKMIYSAIHHEAQLAATAEVGQNSHRREFFRGIFLAM
HEEHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
SSPSAILWFAAVGGTLIARSGGGGPLSSTLFLGGFLCAGLLWSAGLCFAASHGGKLLGDK
CCCCCEEHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHH
LLRYSYMASAAIFCYFAVYVIVSGYNEFVGSGAAEALHTL
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]