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The map label for this gene is oxyR [H]

Identifier: 77460545

GI number: 77460545

Start: 4880107

End: 4880943

Strand: Reverse

Name: oxyR [H]

Synonym: Pfl01_4324

Alternate gene names: 77460545

Gene position: 4880943-4880107 (Counterclockwise)

Preceding gene: 77460547

Following gene: 77460543

Centisome position: 75.81

GC content: 64.28

Gene sequence:

>837_bases
ATGGATATCCGCCATCTCAAAGCCTTCCTCGCGGTGTTCGAAGAACGCAACATCACCGCTGCCGCGCAACGGCTGTTCAT
CAGTCAGCCCACGTTGTCGGTGACCATCAAACAGTTGGAAGAGGAACTCGGCGCGACGCTGTTCGTACGTCAGCCCCGTG
GTGTGGAGGTCAGCGACGAAGCGCGTCTTCTCTACCCGCAGGCGCGCCGGATGGTGGCCGAATCCGAGGCGCTGAGCCGG
ATGTTTCGCGGCCGCGAAAACCGTGCGCCGCTGACTCTCGGCATCGAAGGCGACATCGCCGCCAGCCACATTGAAGCCTT
CGTCCGGATGGCCCATCAGGCGTTGCCCAATCTGCTGCTGACCCTGGAGGAGGGCTGCCATGGCGATGGTCGATTGGCCG
TCGAGGAAATGTGCTGCGAGGACGAACTGTTCCTGCCGCTGTGGGAAGAATCCTATGTGATGGCGCTGCCCCTCGATCAC
CCGATGGCCAACGCGCAGGCCGGCTGGGCGCCGATCGAGGACTGGATCACCTGCCCGCAGCATCCTTCGCATCAGCGGTT
GATGGCGCTGTACGGACGTTCGCCGGAAGCGGTGGCGGGGCATGCCGGTTCATTGCAACAGGCGTTGCACATGGTGGCGG
CGGGTGTCGGTGTGGCCATGTTGCCGCAGTCGCTGGTCAGCGGGCATGAGCACATTGTCGTGCGTGCGCTGCACCTGCCG
GCGCCGACCCGGCGAGTGGGATTGTGTTACGCGGCACAGGCGCTGGAGTTGCCGACGATGCGCGGGTTGCACGCGTATTT
TCAGGTCAATCGCCCGGCAGCCATCGAGGCGGCCTGA

Upstream 100 bases:

>100_bases
TGAGATAAGAAAAACAAATAACCAGATTCGGGGCGCAGTATATTTAGCCCGCTGGAGGCTGAAAAATGCCTTATTCCTCT
GTCTGCTATCGGAATCTCCT

Downstream 100 bases:

>100_bases
GCTATTCCAGCATCTTGCTCAGCAACCAGCTCCCCGCCGGCCCCGGCGGGTACAGCCGCGACCACAGCGCATCGACGAAC
ACCGGTTTCGGCCAGCCGCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDIRHLKAFLAVFEERNITAAAQRLFISQPTLSVTIKQLEEELGATLFVRQPRGVEVSDEARLLYPQARRMVAESEALSR
MFRGRENRAPLTLGIEGDIAASHIEAFVRMAHQALPNLLLTLEEGCHGDGRLAVEEMCCEDELFLPLWEESYVMALPLDH
PMANAQAGWAPIEDWITCPQHPSHQRLMALYGRSPEAVAGHAGSLQQALHMVAAGVGVAMLPQSLVSGHEHIVVRALHLP
APTRRVGLCYAAQALELPTMRGLHAYFQVNRPAAIEAA

Sequences:

>Translated_278_residues
MDIRHLKAFLAVFEERNITAAAQRLFISQPTLSVTIKQLEEELGATLFVRQPRGVEVSDEARLLYPQARRMVAESEALSR
MFRGRENRAPLTLGIEGDIAASHIEAFVRMAHQALPNLLLTLEEGCHGDGRLAVEEMCCEDELFLPLWEESYVMALPLDH
PMANAQAGWAPIEDWITCPQHPSHQRLMALYGRSPEAVAGHAGSLQQALHMVAAGVGVAMLPQSLVSGHEHIVVRALHLP
APTRRVGLCYAAQALELPTMRGLHAYFQVNRPAAIEAA
>Mature_278_residues
MDIRHLKAFLAVFEERNITAAAQRLFISQPTLSVTIKQLEEELGATLFVRQPRGVEVSDEARLLYPQARRMVAESEALSR
MFRGRENRAPLTLGIEGDIAASHIEAFVRMAHQALPNLLLTLEEGCHGDGRLAVEEMCCEDELFLPLWEESYVMALPLDH
PMANAQAGWAPIEDWITCPQHPSHQRLMALYGRSPEAVAGHAGSLQQALHMVAAGVGVAMLPQSLVSGHEHIVVRALHLP
APTRRVGLCYAAQALELPTMRGLHAYFQVNRPAAIEAA

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=281, Percent_Identity=30.6049822064057, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI2367136, Length=248, Percent_Identity=29.0322580645161, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI157672245, Length=177, Percent_Identity=29.9435028248588, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788887, Length=292, Percent_Identity=26.7123287671233, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787601, Length=127, Percent_Identity=30.7086614173228, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 30655; Mature: 30655

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRHLKAFLAVFEERNITAAAQRLFISQPTLSVTIKQLEEELGATLFVRQPRGVEVSDE
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
ARLLYPQARRMVAESEALSRMFRGRENRAPLTLGIEGDIAASHIEAFVRMAHQALPNLLL
CEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
TLEEGCHGDGRLAVEEMCCEDELFLPLWEESYVMALPLDHPMANAQAGWAPIEDWITCPQ
HHHCCCCCCCCCHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCC
HPSHQRLMALYGRSPEAVAGHAGSLQQALHMVAAGVGVAMLPQSLVSGHEHIVVRALHLP
CCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEECC
APTRRVGLCYAAQALELPTMRGLHAYFQVNRPAAIEAA
CCCHHHHHHHHHHHHCCCCHHCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MDIRHLKAFLAVFEERNITAAAQRLFISQPTLSVTIKQLEEELGATLFVRQPRGVEVSDE
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCC
ARLLYPQARRMVAESEALSRMFRGRENRAPLTLGIEGDIAASHIEAFVRMAHQALPNLLL
CEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
TLEEGCHGDGRLAVEEMCCEDELFLPLWEESYVMALPLDHPMANAQAGWAPIEDWITCPQ
HHHCCCCCCCCCHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCC
HPSHQRLMALYGRSPEAVAGHAGSLQQALHMVAAGVGVAMLPQSLVSGHEHIVVRALHLP
CCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEECC
APTRRVGLCYAAQALELPTMRGLHAYFQVNRPAAIEAA
CCCHHHHHHHHHHHHCCCCHHCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA