Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77460543

Identifier: 77460543

GI number: 77460543

Start: 4878725

End: 4879162

Strand: Reverse

Name: 77460543

Synonym: Pfl01_4322

Alternate gene names: NA

Gene position: 4879162-4878725 (Counterclockwise)

Preceding gene: 77460545

Following gene: 77460541

Centisome position: 75.78

GC content: 60.73

Gene sequence:

>438_bases
ATGACTGCCAACAAATCCATCACTGAACGTATCTTCCAGGCCATCGGTTTCGAACTGCTGGCGATCCTGATCTGTACCCC
GTTGCTGGCGTGGATCATGGGCAAACCGCTGGTCGAAATGGGCGCCGTCACTATCGCCATCGCGATGCTGGCCCTGGGCT
GGAACGTGGTGTTCAACGGCTTCTTCGACCGCATGCTCAAGCGCTGGAACATCGCCCACAATGCCTGGGTGCGAGTGGCG
CACGCGCTGCTGTTCGAAGGCGGGTTGATCGTGATGGGCGTGCCGCTGATTGCCTGGTGGCTGTCGGTCAGCCTGTGGCA
GGCGTTCCTGCTCGACATCGGCGTGCTGCTGTTCTTCCTGCCGTACACCTACGTCTACCACTGGGGTTATGACGTGGTGC
GCGAGCGACTGGTGATGCGGAGCGTCTGCCAGAGCTGA

Upstream 100 bases:

>100_bases
CTGAGATGCCATGAACTATCGCCTTGATCGATGGTTATTGGTTATGAAGTATCGGTGTGGTGCTGGATCATGGCAACCAT
CTTCACAGAGGACTTCGGCC

Downstream 100 bases:

>100_bases
AAACAAAAAATCGCCGCCTGTGAGGGCTGCGATTTTTTTTGTCCGGGATTTTTGCAGGGTTTAGAGAAACATCCCGCCCG
ACGCTTCAATCCGCTGACCG

Product: transmembrane pair

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Protein; Transmembrane Pair Family Protein; Bacterial Transmembrane Pair Family Protein

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTANKSITERIFQAIGFELLAILICTPLLAWIMGKPLVEMGAVTIAIAMLALGWNVVFNGFFDRMLKRWNIAHNAWVRVA
HALLFEGGLIVMGVPLIAWWLSVSLWQAFLLDIGVLLFFLPYTYVYHWGYDVVRERLVMRSVCQS

Sequences:

>Translated_145_residues
MTANKSITERIFQAIGFELLAILICTPLLAWIMGKPLVEMGAVTIAIAMLALGWNVVFNGFFDRMLKRWNIAHNAWVRVA
HALLFEGGLIVMGVPLIAWWLSVSLWQAFLLDIGVLLFFLPYTYVYHWGYDVVRERLVMRSVCQS
>Mature_144_residues
TANKSITERIFQAIGFELLAILICTPLLAWIMGKPLVEMGAVTIAIAMLALGWNVVFNGFFDRMLKRWNIAHNAWVRVAH
ALLFEGGLIVMGVPLIAWWLSVSLWQAFLLDIGVLLFFLPYTYVYHWGYDVVRERLVMRSVCQS

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16561; Mature: 16430

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANKSITERIFQAIGFELLAILICTPLLAWIMGKPLVEMGAVTIAIAMLALGWNVVFNG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFDRMLKRWNIAHNAWVRVAHALLFEGGLIVMGVPLIAWWLSVSLWQAFLLDIGVLLFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYTYVYHWGYDVVRERLVMRSVCQS
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TANKSITERIFQAIGFELLAILICTPLLAWIMGKPLVEMGAVTIAIAMLALGWNVVFNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFDRMLKRWNIAHNAWVRVAHALLFEGGLIVMGVPLIAWWLSVSLWQAFLLDIGVLLFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYTYVYHWGYDVVRERLVMRSVCQS
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA