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The map label for this gene is yeeY [H]

Identifier: 77460544

GI number: 77460544

Start: 4879251

End: 4880105

Strand: Direct

Name: yeeY [H]

Synonym: Pfl01_4323

Alternate gene names: 77460544

Gene position: 4879251-4880105 (Clockwise)

Preceding gene: 77460542

Following gene: 77460546

Centisome position: 75.78

GC content: 62.92

Gene sequence:

>855_bases
ATGGCATCTCAGGAAGTGTTGCTGGCATTTGTCCAGGCGGCGACTCAAGGCTCGTTTTCGGCGGCAGCGCGCAAACTCGG
GCGCAGTCAGTCGACAGTGAGTGCGGCGGTGGCGAGTCTTGAGATCGATCTGGACCTGATCTTGTTCGACCGTAGCAGCC
GCAAACCGACCCTGACCCCGGCCGGACACGTGATGCTGCAACGGGCCGAGGCGATTCTGTCCGCCACCAGCCGCCTGGAA
ATGACCGCCCGGCAATTGGCCCAGGGCGTCGAGCCGAAACTCACGGTGGCGATCTCCGACACTTATCAGTCCGACCGTTT
TGAAGCGGCACTGGTGGGTTTCGAGCAGCGCTATCCGGATCTGGAGCTGGAATGCCTGATCGCCGAATGCGATGACCTGG
TCGAACTGGTGCAGCGCGGTCGGGCGCATCTGGCATTCGCCGAGATGCAGGACAACTACCCGCCGGACCTCGCGACCGCG
ACCGTCGCCGAACGCACTGAAATCGCCCTGTTCGTGGGCCGTGGGCATCCGTTGGCGACGCAGGAATCCATCGATCAAAC
GGTCCTTGAACAGCATCGCGAGCTGCGCCTGGCCACCATCGTCAATCCCTATGACAGTCGCGGCAAAGGCCGGGTGTGGT
CGGCACCGAGTTATCTGATGCTGCTGGAAATGGCTGAAAAAGGTTTCGGCTGGGCACCGCTGCCGCGCTGGCTGGTGGAG
CGTTTCGGCAATGACTTGCTGGTGGAACTGAAGGTGCGCGGCTGGCCGAAACCGGTGTTCGTCGATGCGCTGTGGTCGCG
GCTGTACCCGCCGGGGCCGGCGGGGAGCTGGTTGCTGAGCAAGATGCTGGAATAG

Upstream 100 bases:

>100_bases
GTTGGCAGTCATGGCCGAAGTCCTCTGTGAAGATGGTTGCCATGATCCAGCACCACACCGATACTTCATAACCAATAACC
ATCGATCAAGGCGATAGTTC

Downstream 100 bases:

>100_bases
CTCAGGCCGCCTCGATGGCTGCCGGGCGATTGACCTGAAAATACGCGTGCAACCCGCGCATCGTCGGCAACTCCAGCGCC
TGTGCCGCGTAACACAATCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MASQEVLLAFVQAATQGSFSAAARKLGRSQSTVSAAVASLEIDLDLILFDRSSRKPTLTPAGHVMLQRAEAILSATSRLE
MTARQLAQGVEPKLTVAISDTYQSDRFEAALVGFEQRYPDLELECLIAECDDLVELVQRGRAHLAFAEMQDNYPPDLATA
TVAERTEIALFVGRGHPLATQESIDQTVLEQHRELRLATIVNPYDSRGKGRVWSAPSYLMLLEMAEKGFGWAPLPRWLVE
RFGNDLLVELKVRGWPKPVFVDALWSRLYPPGPAGSWLLSKMLE

Sequences:

>Translated_284_residues
MASQEVLLAFVQAATQGSFSAAARKLGRSQSTVSAAVASLEIDLDLILFDRSSRKPTLTPAGHVMLQRAEAILSATSRLE
MTARQLAQGVEPKLTVAISDTYQSDRFEAALVGFEQRYPDLELECLIAECDDLVELVQRGRAHLAFAEMQDNYPPDLATA
TVAERTEIALFVGRGHPLATQESIDQTVLEQHRELRLATIVNPYDSRGKGRVWSAPSYLMLLEMAEKGFGWAPLPRWLVE
RFGNDLLVELKVRGWPKPVFVDALWSRLYPPGPAGSWLLSKMLE
>Mature_283_residues
ASQEVLLAFVQAATQGSFSAAARKLGRSQSTVSAAVASLEIDLDLILFDRSSRKPTLTPAGHVMLQRAEAILSATSRLEM
TARQLAQGVEPKLTVAISDTYQSDRFEAALVGFEQRYPDLELECLIAECDDLVELVQRGRAHLAFAEMQDNYPPDLATAT
VAERTEIALFVGRGHPLATQESIDQTVLEQHRELRLATIVNPYDSRGKGRVWSAPSYLMLLEMAEKGFGWAPLPRWLVER
FGNDLLVELKVRGWPKPVFVDALWSRLYPPGPAGSWLLSKMLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=257, Percent_Identity=24.9027237354086, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786508, Length=183, Percent_Identity=26.775956284153, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1790262, Length=267, Percent_Identity=27.3408239700375, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789492, Length=81, Percent_Identity=41.9753086419753, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1787949, Length=147, Percent_Identity=29.9319727891156, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786713, Length=120, Percent_Identity=32.5, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1787601, Length=179, Percent_Identity=26.2569832402235, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31494; Mature: 31363

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQEVLLAFVQAATQGSFSAAARKLGRSQSTVSAAVASLEIDLDLILFDRSSRKPTLTP
CCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEEECCCCCCCCCH
AGHVMLQRAEAILSATSRLEMTARQLAQGVEPKLTVAISDTYQSDRFEAALVGFEQRYPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCC
LELECLIAECDDLVELVQRGRAHLAFAEMQDNYPPDLATATVAERTEIALFVGRGHPLAT
CCEEHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCCHHHHHHHCCCEEEEEEECCCCCCC
QESIDQTVLEQHRELRLATIVNPYDSRGKGRVWSAPSYLMLLEMAEKGFGWAPLPRWLVE
HHHHHHHHHHHHHHEEHHEEECCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHH
RFGNDLLVELKVRGWPKPVFVDALWSRLYPPGPAGSWLLSKMLE
HCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
ASQEVLLAFVQAATQGSFSAAARKLGRSQSTVSAAVASLEIDLDLILFDRSSRKPTLTP
CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHEEEEEEEEEEECCCCCCCCCH
AGHVMLQRAEAILSATSRLEMTARQLAQGVEPKLTVAISDTYQSDRFEAALVGFEQRYPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCC
LELECLIAECDDLVELVQRGRAHLAFAEMQDNYPPDLATATVAERTEIALFVGRGHPLAT
CCEEHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCCHHHHHHHCCCEEEEEEECCCCCCC
QESIDQTVLEQHRELRLATIVNPYDSRGKGRVWSAPSYLMLLEMAEKGFGWAPLPRWLVE
HHHHHHHHHHHHHHEEHHEEECCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHH
RFGNDLLVELKVRGWPKPVFVDALWSRLYPPGPAGSWLLSKMLE
HCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]