| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hisQ [H]
Identifier: 77460512
GI number: 77460512
Start: 4847268
End: 4847957
Strand: Reverse
Name: hisQ [H]
Synonym: Pfl01_4291
Alternate gene names: 77460512
Gene position: 4847957-4847268 (Counterclockwise)
Preceding gene: 77460513
Following gene: 77460511
Centisome position: 75.3
GC content: 62.17
Gene sequence:
>690_bases ATGTTGAAAGGCTACGGGGCTGTCATCCTCGATGGCGCTTGGCTGACGCTTCAGCTCGCCTTGTCGTCCATGGCCCTGGC CATCGTTCTCGGGCTGATCGGCGTCGCGTTGCGCCTGTCGCCGGTGCGCTGGCTGGCGTGGCTGGGCGATCTGTATTCCA CGGTGATTCGCGGGATTCCCGACCTGGTGCTGATCCTGCTGATCTTCTACGGCGGTCAGGACCTGCTCAACCGCGTTGCG CCTATGCTCGGCTATGACGACTACATCGACCTGAACCCGCTGGCCGCCGGTATCGGCACCCTCGGCTTCATCTTCGGTGC GTACCTGTCGGAAACCTTCCGCGGCGCGTTCATGGCGATCCCCAAAGGTCAGGCCGAAGCGGGCATGGCGTACGGCATGA GCAGCTTCCAGGTGTTCTTCCGGGTGCTGGTGCCGCAGATGATTCGTCTGGCGATTCCGGGCTTCACCAACAACTGGCTG GTGTTGACCAAGGCCACCGCGCTGATTTCCGTGGTCGGTCTGCAAGACATGATGTTCAAGGCCAAGCAGGCGGCCGACGC CACCCGCGAGCCTTTCACCTTCTTCCTCGCAGTGGCGGCGATGTACCTGGTGATCACCAGTGTCTCGTTGCTGGCGCTGC GTCACCTTGAGAAGCGCTACTCGGTAGGCGTAAGGGCGGCTGATCTATGA
Upstream 100 bases:
>100_bases GGCAAGTAAAGACGTCGCTCGACCCGTCCGAAATGGCGCAAGCAACAGGATCTCTGCGGTTTGCGCCATTTTTTCATCCC AACTTTCGAGGACCTGAATC
Downstream 100 bases:
>100_bases TCTTCGACTACAACGTCATTTGGGAGGCCCTGCCGCTGTACTTCGGCGGTCTGGTCACGACCCTCAAGTTGCTCGCGCTG TCGCTGTTCTTCGGTCTGCT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLKGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQDLLNRVA PMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGMSSFQVFFRVLVPQMIRLAIPGFTNNWL VLTKATALISVVGLQDMMFKAKQAADATREPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAADL
Sequences:
>Translated_229_residues MLKGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQDLLNRVA PMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGMSSFQVFFRVLVPQMIRLAIPGFTNNWL VLTKATALISVVGLQDMMFKAKQAADATREPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAADL >Mature_229_residues MLKGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVLILLIFYGGQDLLNRVA PMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGMAYGMSSFQVFFRVLVPQMIRLAIPGFTNNWL VLTKATALISVVGLQDMMFKAKQAADATREPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAADL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=229, Percent_Identity=52.4017467248908, Blast_Score=229, Evalue=8e-62, Organism=Escherichia coli, GI1787087, Length=217, Percent_Identity=35.4838709677419, Blast_Score=148, Evalue=3e-37, Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=31.3364055299539, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788645, Length=223, Percent_Identity=29.5964125560538, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787030, Length=220, Percent_Identity=30, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=26.9767441860465, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786873, Length=216, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=29.4392523364486, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082239, Length=123, Percent_Identity=31.7073170731707, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24889; Mature: 24889
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIP CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DLVLILLIFYGGQDLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAI HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEC PKGQAEAGMAYGMSSFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH AKQAADATREPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAADL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLKGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIP CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DLVLILLIFYGGQDLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAYLSETFRGAFMAI HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEC PKGQAEAGMAYGMSSFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHH AKQAADATREPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVRAADL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]