| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460335
Identifier: 77460335
GI number: 77460335
Start: 4655576
End: 4655932
Strand: Reverse
Name: 77460335
Synonym: Pfl01_4114
Alternate gene names: NA
Gene position: 4655932-4655576 (Counterclockwise)
Preceding gene: 77460336
Following gene: 77460334
Centisome position: 72.31
GC content: 59.66
Gene sequence:
>357_bases GTGAGTAATCGACTTCTTTTCGCGGCCATGGCCGTTCTGGCCCTGGCCGGTTGCGCCAGCGATCCGGCGCCCAACGAACA AATGCGCCTGACTGAGCAGGCCATTGAGCAAGCCAAAGCCGTGGGCGCCACCGCCGAAGATGTGCCGGAAATGAAACTGG CAGAAGATAAGTTCAACCGGGCCAAAGGCAGCATGGCGGGTGAGTCCTACAAGAATGCGCGGATGCGCTTCGAACAGGCT GAGCTCGACGCACGTCTGGCGGAAGCCAAAGTGTTGACCCAGAAGAGCGAAGAGCAAGTGAACGTGCTCAACACCCGCAT CGTCCGACTGCGCAAGCAACTGGGGGATGCCCAATGA
Upstream 100 bases:
>100_bases GACGGAAGCCGCGCTGCAACGCAACATCGAGCGCTGGAAGGCGCAGCAGCAACAGCCGCCGCAACCACCTGTCAGCGCCC CAAAACAGTAGGGATTCTTA
Downstream 100 bases:
>100_bases GCCTGAAGTCCAAAAACCTCGGCGCTCTGATCCTCGCCGGTTGCGCCAGCCTGTACGGCTGCGCCGCTCAGCACAGCGAA TCCGCATTGCAGCAGGCCAG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNRAKGSMAGESYKNARMRFEQA ELDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ
Sequences:
>Translated_118_residues MSNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNRAKGSMAGESYKNARMRFEQA ELDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ >Mature_117_residues SNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNRAKGSMAGESYKNARMRFEQAE LDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12966; Mature: 12835
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNR CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHH AKGSMAGESYKNARMRFEQAELDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNR CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHH AKGSMAGESYKNARMRFEQAELDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA