| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is speG [C]
Identifier: 77460284
GI number: 77460284
Start: 4587435
End: 4587947
Strand: Direct
Name: speG [C]
Synonym: Pfl01_4063
Alternate gene names: 77460284
Gene position: 4587435-4587947 (Clockwise)
Preceding gene: 77460283
Following gene: 77460285
Centisome position: 71.25
GC content: 55.17
Gene sequence:
>513_bases ATGAAGCGCTCACTCCCCTCGTTTGATGAAGGCGCAATGCGCCTTCGCTTGATCGAAGAGAGTGACCTGCACGAGACCTT GTCCTGGAGAAACCGGGACGAGGCACGTGTCTGGTTCAAAACTTCGACGCCTCTCACTTACGAGCAGCATGCCAACTGGT TTCATCAGCGTTATCAGCCGAGCGAGACCGACTTTCTGTTTGTCGTCGAAGCAGACGGCAAGCTGGTCGGCCAGGCGTCC GTCTATGGCATCGACTGGCAGAACCGCACCGCTGAAGTCGGTCGTTTTCTGGTTGACGCCGATCAGGCGGGTCGCGGCCA TATCGGTCGTGCCTGTGGTGTACTGCTGGATATCTGCTGGCACACGCTTGATCTGGACTATGTCTTTCTCGAAGTCATCG AGACCAACGATCGCGCCATTCACCTTTACCGCAAACACGGTTTTTGTGAAGAGCAGCGTTACGACGGCCTCATCAGAATG GGCCTTCGAAAAAAACAGGCGAGAACTGAATGA
Upstream 100 bases:
>100_bases CAGCCAAGGCCAGCCAGGAAATCCTGTCGCTGCCGATGCATCTGGGGCTGACCCGTGCCGACGTCGACACCGTGTGCGAA CTGCTGATCCGCTACGCAAA
Downstream 100 bases:
>100_bases CGAGTGTCACGAGGCTGTTTATCGATAGCACGCGCGCATTGAAAATGTGGCGCGTCTGGACTTACCTGGGCGTTCAGGAC ATCAAGGCAAAATTTCACCG
Product: GCN5-like N-acetyltransferase
Products: Coenzyme A; H+; N8-Acetylspermidine [C]
Alternate protein names: Pseudaminic Acid Biosynthesis N-Acetyl Transferase; Acetyltransferase; Acetyltransferase Gnat Family
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKRSLPSFDEGAMRLRLIEESDLHETLSWRNRDEARVWFKTSTPLTYEQHANWFHQRYQPSETDFLFVVEADGKLVGQAS VYGIDWQNRTAEVGRFLVDADQAGRGHIGRACGVLLDICWHTLDLDYVFLEVIETNDRAIHLYRKHGFCEEQRYDGLIRM GLRKKQARTE
Sequences:
>Translated_170_residues MKRSLPSFDEGAMRLRLIEESDLHETLSWRNRDEARVWFKTSTPLTYEQHANWFHQRYQPSETDFLFVVEADGKLVGQAS VYGIDWQNRTAEVGRFLVDADQAGRGHIGRACGVLLDICWHTLDLDYVFLEVIETNDRAIHLYRKHGFCEEQRYDGLIRM GLRKKQARTE >Mature_170_residues MKRSLPSFDEGAMRLRLIEESDLHETLSWRNRDEARVWFKTSTPLTYEQHANWFHQRYQPSETDFLFVVEADGKLVGQAS VYGIDWQNRTAEVGRFLVDADQAGRGHIGRACGVLLDICWHTLDLDYVFLEVIETNDRAIHLYRKHGFCEEQRYDGLIRM GLRKKQARTE
Specific function: Regulates Polyamine Concentration By Their Degradation. Acts On Spermidine, Forming N(1)- And N(8)-Acetylspermidine. [C]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.57 [C]
Molecular weight: Translated: 19963; Mature: 19963
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSLPSFDEGAMRLRLIEESDLHETLSWRNRDEARVWFKTSTPLTYEQHANWFHQRYQP CCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCC SETDFLFVVEADGKLVGQASVYGIDWQNRTAEVGRFLVDADQAGRGHIGRACGVLLDICW CCCCEEEEEECCCCEEECEEEEEECCCCCHHHHHHEEEECCCCCCCCCHHHHHHHHHHHH HTLDLDYVFLEVIETNDRAIHLYRKHGFCEEQRYDGLIRMGLRKKQARTE HHHCHHEEEEEEEECCCCEEEEEECCCCCCHHHHCCHHHHCCHHHHCCCC >Mature Secondary Structure MKRSLPSFDEGAMRLRLIEESDLHETLSWRNRDEARVWFKTSTPLTYEQHANWFHQRYQP CCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCC SETDFLFVVEADGKLVGQASVYGIDWQNRTAEVGRFLVDADQAGRGHIGRACGVLLDICW CCCCEEEEEECCCCEEECEEEEEECCCCCHHHHHHEEEECCCCCCCCCHHHHHHHHHHHH HTLDLDYVFLEVIETNDRAIHLYRKHGFCEEQRYDGLIRMGLRKKQARTE HHHCHHEEEEEEEECCCCEEEEEECCCCCCHHHHCCHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; Spermidine [C]
Specific reaction: Acetyl-CoA + Spermidine --> Coenzyme A + H+ + N8-Acetylspermidine [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA