| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460166
Identifier: 77460166
GI number: 77460166
Start: 4471185
End: 4472975
Strand: Direct
Name: 77460166
Synonym: Pfl01_3945
Alternate gene names: NA
Gene position: 4471185-4472975 (Clockwise)
Preceding gene: 77460162
Following gene: 77460167
Centisome position: 69.45
GC content: 64.1
Gene sequence:
>1791_bases ATGCCCACCACGGTTCGCATCGGATGCGCCAGCGCATTCTGGGGAGACACTTCGACCGCCGCTGCGCAGCTCGTGGCCGG GGGACAGCTGGATTATCTGGTCTTCGACTACCTGGCCGAAATAACCATGTCGATCATGGCAGGCGCGCGCATGAAGGATC CGCAGGCCGGATTTGCCGCCGACTTCATCGAAGTCCTCACGCCCCTGCTGCCGCTATTGGCCGAACAGAACATTCGCGTC ATCAGCAATGCCGGCGGGGTCAATCCCAAGGCCTGCGCGGCCGCCCTGCAAGCGGCCTGCGACAAGGCTGGCGTAGCACT GAAAATCGCCGTGCTGTCGGGCGATGACCTGCAACCCCAGTTCAAACACCTCGCCTCCCAAGGCATTACGGAAATGTTCA GCGGCGCCCCGCTGCCGCCGATGTGCGTGTCGACCAACGCCTACCTCGGCGCGCCGGGCATCGTCGAAGCCCTGCGCCTG GGTGCCGACATCGTGATCACCGGCCGGGTGGTCGACAGCGCGGTGGTCAGCGCCGCGCTGGTGCATGAATTCGGCTGGTC GTGGCATGACTACGACAAACTCGCGCAAGCCGCCCTGGCCGGGCACATCATCGAATGTGGCGCGCAATGCACCGGCGGTA ATTTCACCGACTGGCGCGACGTGCCGGATTACGAGCACATCGGCTTTCCGATCGTCGAAGTCAACGCCGACGGCCAGTTC ATCGTCAGCAAACCCGAAGGCTCCGGCGGGCTGGTCACGCCGCTGACCGTCGGCGAGCAGATGCTCTACGAAATCGGTGA TCCGCAGGCCTATCTGTTGCCCGATGTGGTCTGCGATTTCAGCCAGGTCAAACTCCAGCAACAAGGCAAAAACGCCGTCC GGGTCCACGGCGCCAAAGGCTTGCCGCCCAGCGACCAATACAAGGTCAGCGCCACGTATCCGGATGGTTTCCGCTGCACC GCCAGTTGCCTGATCGCCGGCATCGATGCCGTGGAAAAAGCCCGGCGCGTCAGTCGGGCGATCCTCGACAAGACTTCGGA AATGCTCGAACAAAAAGGCTTGGGACCGTACACCGAAACCGATGTCGAACTGCTCGGCAGCGAAGCCACCTACGGCCCTC ACGGCCAGCGCCGGGACAGCCGCGAAGTGGTGATCAAACTCGCCGTGCGCCACCCGAACAAACAGGCGCTGATCTTGTTC TCCCGCGAGATAGCCCAGGCCGCCACCGGCATGGCGCCGGGCCTGACCGGCATCGTCGGCGGGCGGCCGACGGTGTATCC GCTGATCCGGCTGTTCTCGTTCCTGATCGACAAAAGCGCCTGCACCTTGCAGATCGACATCGCCGGCGAATCTCACCCGT TCACCCTGCCCGCCCCCGCCACCCTCGACAGTCAGGATCTGCCCCTGCCCCACGAAACGCCTAAACCCCAGGGCCGCGCC GACGCGAGTGTGCCGCTGGTGAAACTGGCCGTGGCGCGTTCCGGCGACAAGGGCAATCACAGCAACATCGGCGTCCTGCC GCGTCGTCCGGAATACCTACCGTGGATCGTCGAAGCGCTGACCCCGGCGGTGGTCGTCGATTGGATGAACCATGTCCTCG ACCCGATTCACGGCCGGGTCGAACGCTGGTATCTGCCCGGCACCCACAGCCTCAACTTCCTGCTGGAAAACGCCCTTGGT GGCGGCGGCGTGGCGAGCCTGCGCATCGACCCGCAAGGCAAGGCTTTCGCCCAGCAATTACTGGAAATCCAGATCCCGGT GCCGCAAAGCATCGCCGAACAGTTCGACTAG
Upstream 100 bases:
>100_bases AAGCGCTTGGGCAGAAGAAAACTTCAGGTGTTTACAAACCAAGCGCTTGCTTGGTAGCCTCGATGCACTTCTGTCACAGG TTGCTGAGTCGGAGATCAAA
Downstream 100 bases:
>100_bases AGGATTGGCAGCATGGCGTTCGAATCGATTTTCAGGGCTGATCTGTTCAGCGGTCAGACCGTCATCGTCACCGGGGGCGG CAGTGGCATCGGGCGTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 596; Mature: 595
Protein sequence:
>596_residues MPTTVRIGCASAFWGDTSTAAAQLVAGGQLDYLVFDYLAEITMSIMAGARMKDPQAGFAADFIEVLTPLLPLLAEQNIRV ISNAGGVNPKACAAALQAACDKAGVALKIAVLSGDDLQPQFKHLASQGITEMFSGAPLPPMCVSTNAYLGAPGIVEALRL GADIVITGRVVDSAVVSAALVHEFGWSWHDYDKLAQAALAGHIIECGAQCTGGNFTDWRDVPDYEHIGFPIVEVNADGQF IVSKPEGSGGLVTPLTVGEQMLYEIGDPQAYLLPDVVCDFSQVKLQQQGKNAVRVHGAKGLPPSDQYKVSATYPDGFRCT ASCLIAGIDAVEKARRVSRAILDKTSEMLEQKGLGPYTETDVELLGSEATYGPHGQRRDSREVVIKLAVRHPNKQALILF SREIAQAATGMAPGLTGIVGGRPTVYPLIRLFSFLIDKSACTLQIDIAGESHPFTLPAPATLDSQDLPLPHETPKPQGRA DASVPLVKLAVARSGDKGNHSNIGVLPRRPEYLPWIVEALTPAVVVDWMNHVLDPIHGRVERWYLPGTHSLNFLLENALG GGGVASLRIDPQGKAFAQQLLEIQIPVPQSIAEQFD
Sequences:
>Translated_596_residues MPTTVRIGCASAFWGDTSTAAAQLVAGGQLDYLVFDYLAEITMSIMAGARMKDPQAGFAADFIEVLTPLLPLLAEQNIRV ISNAGGVNPKACAAALQAACDKAGVALKIAVLSGDDLQPQFKHLASQGITEMFSGAPLPPMCVSTNAYLGAPGIVEALRL GADIVITGRVVDSAVVSAALVHEFGWSWHDYDKLAQAALAGHIIECGAQCTGGNFTDWRDVPDYEHIGFPIVEVNADGQF IVSKPEGSGGLVTPLTVGEQMLYEIGDPQAYLLPDVVCDFSQVKLQQQGKNAVRVHGAKGLPPSDQYKVSATYPDGFRCT ASCLIAGIDAVEKARRVSRAILDKTSEMLEQKGLGPYTETDVELLGSEATYGPHGQRRDSREVVIKLAVRHPNKQALILF SREIAQAATGMAPGLTGIVGGRPTVYPLIRLFSFLIDKSACTLQIDIAGESHPFTLPAPATLDSQDLPLPHETPKPQGRA DASVPLVKLAVARSGDKGNHSNIGVLPRRPEYLPWIVEALTPAVVVDWMNHVLDPIHGRVERWYLPGTHSLNFLLENALG GGGVASLRIDPQGKAFAQQLLEIQIPVPQSIAEQFD >Mature_595_residues PTTVRIGCASAFWGDTSTAAAQLVAGGQLDYLVFDYLAEITMSIMAGARMKDPQAGFAADFIEVLTPLLPLLAEQNIRVI SNAGGVNPKACAAALQAACDKAGVALKIAVLSGDDLQPQFKHLASQGITEMFSGAPLPPMCVSTNAYLGAPGIVEALRLG ADIVITGRVVDSAVVSAALVHEFGWSWHDYDKLAQAALAGHIIECGAQCTGGNFTDWRDVPDYEHIGFPIVEVNADGQFI VSKPEGSGGLVTPLTVGEQMLYEIGDPQAYLLPDVVCDFSQVKLQQQGKNAVRVHGAKGLPPSDQYKVSATYPDGFRCTA SCLIAGIDAVEKARRVSRAILDKTSEMLEQKGLGPYTETDVELLGSEATYGPHGQRRDSREVVIKLAVRHPNKQALILFS REIAQAATGMAPGLTGIVGGRPTVYPLIRLFSFLIDKSACTLQIDIAGESHPFTLPAPATLDSQDLPLPHETPKPQGRAD ASVPLVKLAVARSGDKGNHSNIGVLPRRPEYLPWIVEALTPAVVVDWMNHVLDPIHGRVERWYLPGTHSLNFLLENALGG GGVASLRIDPQGKAFAQQLLEIQIPVPQSIAEQFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63608; Mature: 63477
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTVRIGCASAFWGDTSTAAAQLVAGGQLDYLVFDYLAEITMSIMAGARMKDPQAGFAA CCCEEEEECCHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH DFIEVLTPLLPLLAEQNIRVISNAGGVNPKACAAALQAACDKAGVALKIAVLSGDDLQPQ HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH FKHLASQGITEMFSGAPLPPMCVSTNAYLGAPGIVEALRLGADIVITGRVVDSAVVSAAL HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHCCCCEEEECHHHHHHHHHHHH VHEFGWSWHDYDKLAQAALAGHIIECGAQCTGGNFTDWRDVPDYEHIGFPIVEVNADGQF HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE IVSKPEGSGGLVTPLTVGEQMLYEIGDPQAYLLPDVVCDFSQVKLQQQGKNAVRVHGAKG EEECCCCCCCEEEHHHHHHHHHHHCCCCCEEECHHHHHCHHHHHHHHCCCCEEEEECCCC LPPSDQYKVSATYPDGFRCTASCLIAGIDAVEKARRVSRAILDKTSEMLEQKGLGPYTET CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DVELLGSEATYGPHGQRRDSREVVIKLAVRHPNKQALILFSREIAQAATGMAPGLTGIVG HHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCCCCCC GRPTVYPLIRLFSFLIDKSACTLQIDIAGESHPFTLPAPATLDSQDLPLPHETPKPQGRA CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC DASVPLVKLAVARSGDKGNHSNIGVLPRRPEYLPWIVEALTPAVVVDWMNHVLDPIHGRV CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ERWYLPGTHSLNFLLENALGGGGVASLRIDPQGKAFAQQLLEIQIPVPQSIAEQFD EEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHEEECCCCHHHHHHCC >Mature Secondary Structure PTTVRIGCASAFWGDTSTAAAQLVAGGQLDYLVFDYLAEITMSIMAGARMKDPQAGFAA CCEEEEECCHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH DFIEVLTPLLPLLAEQNIRVISNAGGVNPKACAAALQAACDKAGVALKIAVLSGDDLQPQ HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH FKHLASQGITEMFSGAPLPPMCVSTNAYLGAPGIVEALRLGADIVITGRVVDSAVVSAAL HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHCCCCEEEECHHHHHHHHHHHH VHEFGWSWHDYDKLAQAALAGHIIECGAQCTGGNFTDWRDVPDYEHIGFPIVEVNADGQF HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE IVSKPEGSGGLVTPLTVGEQMLYEIGDPQAYLLPDVVCDFSQVKLQQQGKNAVRVHGAKG EEECCCCCCCEEEHHHHHHHHHHHCCCCCEEECHHHHHCHHHHHHHHCCCCEEEEECCCC LPPSDQYKVSATYPDGFRCTASCLIAGIDAVEKARRVSRAILDKTSEMLEQKGLGPYTET CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DVELLGSEATYGPHGQRRDSREVVIKLAVRHPNKQALILFSREIAQAATGMAPGLTGIVG HHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCCCCCC GRPTVYPLIRLFSFLIDKSACTLQIDIAGESHPFTLPAPATLDSQDLPLPHETPKPQGRA CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC DASVPLVKLAVARSGDKGNHSNIGVLPRRPEYLPWIVEALTPAVVVDWMNHVLDPIHGRV CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ERWYLPGTHSLNFLLENALGGGGVASLRIDPQGKAFAQQLLEIQIPVPQSIAEQFD EEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHEEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA