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The map label for this gene is fecI [C]

Identifier: 77460162

GI number: 77460162

Start: 4467750

End: 4468304

Strand: Direct

Name: fecI [C]

Synonym: Pfl01_3941

Alternate gene names: 77460162

Gene position: 4467750-4468304 (Clockwise)

Preceding gene: 77460159

Following gene: 77460166

Centisome position: 69.39

GC content: 59.82

Gene sequence:

>555_bases
ATGACGGAACAAGTATCCACAAGCAGGTGCGATTCACCGCTACTTCAGGCATTCGTCGACAATCGACTGATTCTGGTCAA
GATTGCAGCCCGCATTACCGGCTGCCGGTCACGCGCCGAAGACGTGGTGCAGGATGCGTTCTTCCGACTGCAATCGGCCC
CGCCGATCACGTCGTCGATCAAGGCCCAGCTGAGTTATCTGTTCCAGATCGTGCGCAACCTGGCGATCGATCACTACCGC
AAACAGGCGCTGGAGCAGAAGTACGCCGGCCCCGAGGAGGAAGGGTTGAACGTGGTCATTCAGGGCGCTTCGCCGGAAAC
CTCGCACATCAATTTCTCGACCCTGGAACACATCGCCGACGCGCTGACCGAGCTGCCGGTCCGTACCCGCTATGCGTTCG
AGATGTACCGTCTGCACGGCGTGCCGCAGAAGGACATCGCCAAGGAACTCGGCGTTTCCCCGACCCTGGTCAACTTCATG
ATTCGCGACGCACTGGTGCATTGCCGCAAGGTGTCGAGCAGTCGCGCTGATGCAGTGACCGCAAACCGTCGCTGA

Upstream 100 bases:

>100_bases
AATTGACAATCATTATCATTCAACATAATTTGTCGCTCGATGTGTAGGACGACCCCGCCCCCAGGCGTCCCACTAACCTA
TTGGCAGCAAGGTGATTTCC

Downstream 100 bases:

>100_bases
TAAAAATCGGCCGCAAAAAAAGATCGCAGCCTTCGTCGAAGCGCTGCGATCTTTTTTTGTCTTCAGCGAAATATCACACC
AGCGTGCAGCGGTCGAAAAA

Product: extracytoplasmic-function sigma-70 factor

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor; Extracytoplasmic-Function Sigma-70 Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family; Extracytoplasmic-Function Sigma-70 Factor PvdS; Sigma Factor; RNA Polymerase Sigma-70 Family Protein; ECF Subfamily RNA Polymerase Sigma-70 Factor; Fec I Like Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Factor FecI; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma Factor FECI Protein; Ferric Regulator Sigma-24 Subunit; DNA-Directed RNA Polymerase Sigma-E/Sigma-24/FecI; FecI Like Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; RNA Polymerase Sigma Factor Protein; ECF Family RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase ECF-Subfamily Sigma-70 Factor; ECF Sigma Factor FecI Family; RNA Polymerase Sigma Factor FecI Family

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MTEQVSTSRCDSPLLQAFVDNRLILVKIAARITGCRSRAEDVVQDAFFRLQSAPPITSSIKAQLSYLFQIVRNLAIDHYR
KQALEQKYAGPEEEGLNVVIQGASPETSHINFSTLEHIADALTELPVRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFM
IRDALVHCRKVSSSRADAVTANRR

Sequences:

>Translated_184_residues
MTEQVSTSRCDSPLLQAFVDNRLILVKIAARITGCRSRAEDVVQDAFFRLQSAPPITSSIKAQLSYLFQIVRNLAIDHYR
KQALEQKYAGPEEEGLNVVIQGASPETSHINFSTLEHIADALTELPVRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFM
IRDALVHCRKVSSSRADAVTANRR
>Mature_183_residues
TEQVSTSRCDSPLLQAFVDNRLILVKIAARITGCRSRAEDVVQDAFFRLQSAPPITSSIKAQLSYLFQIVRNLAIDHYRK
QALEQKYAGPEEEGLNVVIQGASPETSHINFSTLEHIADALTELPVRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMI
RDALVHCRKVSSSRADAVTANRR

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790746, Length=132, Percent_Identity=32.5757575757576, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20627; Mature: 20496

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQVSTSRCDSPLLQAFVDNRLILVKIAARITGCRSRAEDVVQDAFFRLQSAPPITSSI
CCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KAQLSYLFQIVRNLAIDHYRKQALEQKYAGPEEEGLNVVIQGASPETSHINFSTLEHIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
ALTELPVRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVSSSRADAVT
HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHC
ANRR
CCCC
>Mature Secondary Structure 
TEQVSTSRCDSPLLQAFVDNRLILVKIAARITGCRSRAEDVVQDAFFRLQSAPPITSSI
CCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KAQLSYLFQIVRNLAIDHYRKQALEQKYAGPEEEGLNVVIQGASPETSHINFSTLEHIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
ALTELPVRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVSSSRADAVT
HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHC
ANRR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA