| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460050
Identifier: 77460050
GI number: 77460050
Start: 4328157
End: 4328816
Strand: Direct
Name: 77460050
Synonym: Pfl01_3828
Alternate gene names: NA
Gene position: 4328157-4328816 (Clockwise)
Preceding gene: 77460049
Following gene: 77460051
Centisome position: 67.22
GC content: 55.0
Gene sequence:
>660_bases ATGGAAACCAGCACGACCCTCCCAAGAAAATACTTTGTTGTCGTGACTAACAGCTCAGCGTCGCAGCGCGAACTCGAGAG CATTCTCTCCAGTGAGCGTTTCAATTCGTTTGGCACGTCTCAGGCACAAATGTTTATTGAAGGTGTTGCTTCGCCCTCTT CCACTCCGATGCTGATGGAGTTCACTTACCCACGCGGCACAAGGAAGCATGTCGCACGCAGCATCGAACATGATACCCAG CGCATATTGGCCACCCTCGAATCGGAATGGCTGGCAGCACAATCGGCGCATTCATTCCACAACTCCACGGCCATGTCCGA AGACCCCACTGACACTTCCCGAACGATCGAGTCCGACGCGCCCTGCACTGAAGCCTGGCATCTGGACAATGATCAGGGTG CATTGACGAAAGAGGGTGTCGAGATCAGTCTCACCGGGCTCGAAACCGCACTGGTCCGCAAGATGCTGCACCATGAAGAT CGTGTTGTCAGTCGCGACGATCTGATCCTCAGCATCGGCCGCGAGCCGGAGCAGTACCGGGGACTGGAAATGTGCCTGAG CCGTCTTCAAGACAAATTCAAGAACGCCAGCAACGGTGAACGATTGTTTCGTGCCGTACGCAACCGCGGATATTGCCTGA TCCAGGAAGTTGTTGCCTGA
Upstream 100 bases:
>100_bases TTTGGGCCCAGACCCTGCCTGATCGATTAATTCCGAGGAAAACATTGCTCGCCTGCCATTATTTTTTCGCCAAATTTGGT GTGTACTTTAGGAGAGAGAC
Downstream 100 bases:
>100_bases ACAACATCCCCCACTACAAGACAAACAGATACAAGTGCGATTACAAAAATAAAAAAGCACTCTGTTTGGTTTCACCCCTC CCTGGTTATACCCGCCTCCT
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues METSTTLPRKYFVVVTNSSASQRELESILSSERFNSFGTSQAQMFIEGVASPSSTPMLMEFTYPRGTRKHVARSIEHDTQ RILATLESEWLAAQSAHSFHNSTAMSEDPTDTSRTIESDAPCTEAWHLDNDQGALTKEGVEISLTGLETALVRKMLHHED RVVSRDDLILSIGREPEQYRGLEMCLSRLQDKFKNASNGERLFRAVRNRGYCLIQEVVA
Sequences:
>Translated_219_residues METSTTLPRKYFVVVTNSSASQRELESILSSERFNSFGTSQAQMFIEGVASPSSTPMLMEFTYPRGTRKHVARSIEHDTQ RILATLESEWLAAQSAHSFHNSTAMSEDPTDTSRTIESDAPCTEAWHLDNDQGALTKEGVEISLTGLETALVRKMLHHED RVVSRDDLILSIGREPEQYRGLEMCLSRLQDKFKNASNGERLFRAVRNRGYCLIQEVVA >Mature_219_residues METSTTLPRKYFVVVTNSSASQRELESILSSERFNSFGTSQAQMFIEGVASPSSTPMLMEFTYPRGTRKHVARSIEHDTQ RILATLESEWLAAQSAHSFHNSTAMSEDPTDTSRTIESDAPCTEAWHLDNDQGALTKEGVEISLTGLETALVRKMLHHED RVVSRDDLILSIGREPEQYRGLEMCLSRLQDKFKNASNGERLFRAVRNRGYCLIQEVVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24659; Mature: 24659
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSTTLPRKYFVVVTNSSASQRELESILSSERFNSFGTSQAQMFIEGVASPSSTPMLME CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEE FTYPRGTRKHVARSIEHDTQRILATLESEWLAAQSAHSFHNSTAMSEDPTDTSRTIESDA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC PCTEAWHLDNDQGALTKEGVEISLTGLETALVRKMLHHEDRVVSRDDLILSIGREPEQYR CCCHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH GLEMCLSRLQDKFKNASNGERLFRAVRNRGYCLIQEVVA HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHC >Mature Secondary Structure METSTTLPRKYFVVVTNSSASQRELESILSSERFNSFGTSQAQMFIEGVASPSSTPMLME CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEE FTYPRGTRKHVARSIEHDTQRILATLESEWLAAQSAHSFHNSTAMSEDPTDTSRTIESDA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC PCTEAWHLDNDQGALTKEGVEISLTGLETALVRKMLHHEDRVVSRDDLILSIGREPEQYR CCCHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHH GLEMCLSRLQDKFKNASNGERLFRAVRNRGYCLIQEVVA HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA