| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459794
Identifier: 77459794
GI number: 77459794
Start: 4041244
End: 4041594
Strand: Reverse
Name: 77459794
Synonym: Pfl01_3572
Alternate gene names: NA
Gene position: 4041594-4041244 (Counterclockwise)
Preceding gene: 77459803
Following gene: 77459792
Centisome position: 62.77
GC content: 62.11
Gene sequence:
>351_bases ATGCGAATGCTGATGGTGGCGCTGGCGGCAACCCTGCTGGCCGGTTGCGCGGGTTCGGCGATGGAAGACGCCCGCACGCA AACCCCTAACAAGACCCTGAATTCGGACAAACCCGAAAAAGTCGTGGCCCAGTGCGTGCAATTCGCCTGGCAGGACGAAG CGGTGTTCGGCGTGGACGCGGCGGCGTATCTGCAACCGGGCAAGAAGGGCGGTTCGACGGTCTACACGCGCTCGGCGGAG TCGTTTGTCGACTTGACCACGGATGCGTCCGGTACCGTATTGAACTACTACGCGCAGAAGGATGATTTTGTGGCCAAGCG CCGCTTGGCGGCGCTGGCGACCTGTCTGTAA
Upstream 100 bases:
>100_bases CCGCAGCGGCCGGCATGTGTCGCGCTCTAAATGCAGTAAAGCAGAACGTTTTTTGGCGTTGCGGTGATACAGTCCGGTTT TTTCCGAATGAGCGAATGCA
Downstream 100 bases:
>100_bases CGGGCAGCTGAATGCGTTGACGCTACGCGACCCTCGCCAGCCTGCGGGCGGGGGTCGCTGAATTCAATCAATCAAACGCT TCTGGAAAAAATGCCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MRMLMVALAATLLAGCAGSAMEDARTQTPNKTLNSDKPEKVVAQCVQFAWQDEAVFGVDAAAYLQPGKKGGSTVYTRSAE SFVDLTTDASGTVLNYYAQKDDFVAKRRLAALATCL
Sequences:
>Translated_116_residues MRMLMVALAATLLAGCAGSAMEDARTQTPNKTLNSDKPEKVVAQCVQFAWQDEAVFGVDAAAYLQPGKKGGSTVYTRSAE SFVDLTTDASGTVLNYYAQKDDFVAKRRLAALATCL >Mature_116_residues MRMLMVALAATLLAGCAGSAMEDARTQTPNKTLNSDKPEKVVAQCVQFAWQDEAVFGVDAAAYLQPGKKGGSTVYTRSAE SFVDLTTDASGTVLNYYAQKDDFVAKRRLAALATCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12388; Mature: 12388
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMLMVALAATLLAGCAGSAMEDARTQTPNKTLNSDKPEKVVAQCVQFAWQDEAVFGVDA CHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCH AAYLQPGKKGGSTVYTRSAESFVDLTTDASGTVLNYYAQKDDFVAKRRLAALATCL HHHHCCCCCCCCEEEEECCCHHHEECCCCCCCEEEEHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRMLMVALAATLLAGCAGSAMEDARTQTPNKTLNSDKPEKVVAQCVQFAWQDEAVFGVDA CHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCH AAYLQPGKKGGSTVYTRSAESFVDLTTDASGTVLNYYAQKDDFVAKRRLAALATCL HHHHCCCCCCCCEEEEECCCHHHEECCCCCCCEEEEHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA