| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459792
Identifier: 77459792
GI number: 77459792
Start: 4040180
End: 4040617
Strand: Reverse
Name: 77459792
Synonym: Pfl01_3570
Alternate gene names: NA
Gene position: 4040617-4040180 (Counterclockwise)
Preceding gene: 77459794
Following gene: 77459791
Centisome position: 62.76
GC content: 54.11
Gene sequence:
>438_bases ATGAACATTTTCGAAGCCCTGCGTGAAAGCCACGATCGTCAGCGGACCTATGCGAAATCGTTGATCAAGACCAGCGGTGA CACCCCGGAAAGGGTCGAGGCCTACAAGCAGTTGAAGGCTGAGCTGCAAGCCCATGAAACGGCTGAAGAGCGCCATTTCT ATATTCCGCTGATGGAGTACGACAACGGTATCGACCTCAGTCGGCATGCCATCGCCGAGCACCATGAAATGGACGAAATG ATGGAAGAACTCGACGAGACCGAGATGTCCAGCCCGGCCTGGTTGGCCACGGCGAAAAAGCTTTCGGAGAAGGTCCATCA CCACTTGCAGGAAGAAGAGCAGAAATTCTTCCAGATGGCCGGCAAATTGCTCGACGACAAGCAAAAGGTACAGCTCGCCG GGCAGTATCAAAAGGAGTTCGAGGCACAGCTTCCCTGA
Upstream 100 bases:
>100_bases CGCCACCGTCGGTTGAAGCAATCGCTTGGAACCGTTGCTCCTGCGCCGCGGTCTAGCCCTTCAGGGCGTCCATCCGGAAC GCGTTTGCCTGGGAGATTCC
Downstream 100 bases:
>100_bases ACCGGTAAATGCAGGTTTTTGTTATGACGCGGTGTAGTCTTTTTGCCATGCGACGGGTGAGCGTCGTCGCAATGAACTGT GTTTATATACAGTATTTTCG
Product: hemerythrin HHE cation binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MNIFEALRESHDRQRTYAKSLIKTSGDTPERVEAYKQLKAELQAHETAEERHFYIPLMEYDNGIDLSRHAIAEHHEMDEM MEELDETEMSSPAWLATAKKLSEKVHHHLQEEEQKFFQMAGKLLDDKQKVQLAGQYQKEFEAQLP
Sequences:
>Translated_145_residues MNIFEALRESHDRQRTYAKSLIKTSGDTPERVEAYKQLKAELQAHETAEERHFYIPLMEYDNGIDLSRHAIAEHHEMDEM MEELDETEMSSPAWLATAKKLSEKVHHHLQEEEQKFFQMAGKLLDDKQKVQLAGQYQKEFEAQLP >Mature_145_residues MNIFEALRESHDRQRTYAKSLIKTSGDTPERVEAYKQLKAELQAHETAEERHFYIPLMEYDNGIDLSRHAIAEHHEMDEM MEELDETEMSSPAWLATAKKLSEKVHHHLQEEEQKFFQMAGKLLDDKQKVQLAGQYQKEFEAQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17058; Mature: 17058
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFEALRESHDRQRTYAKSLIKTSGDTPERVEAYKQLKAELQAHETAEERHFYIPLMEY CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEC DNGIDLSRHAIAEHHEMDEMMEELDETEMSSPAWLATAKKLSEKVHHHLQEEEQKFFQMA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKLLDDKQKVQLAGQYQKEFEAQLP HHHHCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIFEALRESHDRQRTYAKSLIKTSGDTPERVEAYKQLKAELQAHETAEERHFYIPLMEY CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEC DNGIDLSRHAIAEHHEMDEMMEELDETEMSSPAWLATAKKLSEKVHHHLQEEEQKFFQMA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKLLDDKQKVQLAGQYQKEFEAQLP HHHHCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA