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The map label for this gene is gbpA [H]

Identifier: 77459791

GI number: 77459791

Start: 4039321

End: 4039956

Strand: Reverse

Name: gbpA [H]

Synonym: Pfl01_3569

Alternate gene names: 77459791

Gene position: 4039956-4039321 (Counterclockwise)

Preceding gene: 77459792

Following gene: 77459790

Centisome position: 62.75

GC content: 58.81

Gene sequence:

>636_bases
ATGAACCAACCACAAGCTCAAACCCAACTGCGACACGGTCGCGTCATTTCCCCTGCAAGCCGCGGCGCGGTGGCCATCGA
GCAAGGATTGCTCGGCGGCTGGCAGGTCAATGAAATGGAAGGTGGCAAGAACTTCCCGGCACTCGCGGCCGGTCCGTTCC
CGGCGCCGTTCGAAAGCGACAACCCGAGCGTCGTACCGCCTGCTGACGGCTATATTCTCAGTGGCGGCAAGAACGATGCA
CGTGACTGCGTGAACTTCACTGCAGAAGAAATGAGCAAGAAACTCGGGCGTCCGTTCTCCTGGCCGCTGCTCAATGTCAC
TCCCGGCCAGACCCTTGAGGTCAAATGGGAGTACACCGCACCGCACACCACCCGCGGTTACCGCTGGCTGATCACCAAGG
ATGGCTGGGACCCGAAACAACGCATCACCCGAGCGCAGCTGGAGGCGCAACCGTTCGCCGAGGATTTCTATCCGCAAGTC
CCGTACTACAGTCATGCGGCGGAATTGAAAGCCAAGGTCAATCACGCGGTGAAACTTCCAGGCAACAAGCAAGGGCATCA
CGTCATCGTCCTGATGTGGATCGTCGCCAACACCGGCAACGCCTTCTATCAGGCCTTCGATGTGGACTTCAAATAA

Upstream 100 bases:

>100_bases
CAGACTGCGACAAAACCGCCGATGGACAAAAAATCCCCCTCCGTTAGCTTGAAGGCCTCTCCTCGGACAGGAGAGTTCTT
AAATCAACGGAGTGAAAAAC

Downstream 100 bases:

>100_bases
GCCCGCAACGCCAAACCCACAGGTTCTGAAGGATTAGAACATGTCAAACATCGACTTCACCCTATTGAAAAACCAGGCCA
GCGACGCGGCGTCGCTGATG

Product: chitin-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNQPQAQTQLRHGRVISPASRGAVAIEQGLLGGWQVNEMEGGKNFPALAAGPFPAPFESDNPSVVPPADGYILSGGKNDA
RDCVNFTAEEMSKKLGRPFSWPLLNVTPGQTLEVKWEYTAPHTTRGYRWLITKDGWDPKQRITRAQLEAQPFAEDFYPQV
PYYSHAAELKAKVNHAVKLPGNKQGHHVIVLMWIVANTGNAFYQAFDVDFK

Sequences:

>Translated_211_residues
MNQPQAQTQLRHGRVISPASRGAVAIEQGLLGGWQVNEMEGGKNFPALAAGPFPAPFESDNPSVVPPADGYILSGGKNDA
RDCVNFTAEEMSKKLGRPFSWPLLNVTPGQTLEVKWEYTAPHTTRGYRWLITKDGWDPKQRITRAQLEAQPFAEDFYPQV
PYYSHAAELKAKVNHAVKLPGNKQGHHVIVLMWIVANTGNAFYQAFDVDFK
>Mature_211_residues
MNQPQAQTQLRHGRVISPASRGAVAIEQGLLGGWQVNEMEGGKNFPALAAGPFPAPFESDNPSVVPPADGYILSGGKNDA
RDCVNFTAEEMSKKLGRPFSWPLLNVTPGQTLEVKWEYTAPHTTRGYRWLITKDGWDPKQRITRAQLEAQPFAEDFYPQV
PYYSHAAELKAKVNHAVKLPGNKQGHHVIVLMWIVANTGNAFYQAFDVDFK

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 23431; Mature: 23431

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPQAQTQLRHGRVISPASRGAVAIEQGLLGGWQVNEMEGGKNFPALAAGPFPAPFESD
CCCCHHHHHHHCCCEECCCCCCCEEECCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCC
NPSVVPPADGYILSGGKNDARDCVNFTAEEMSKKLGRPFSWPLLNVTPGQTLEVKWEYTA
CCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEECC
PHTTRGYRWLITKDGWDPKQRITRAQLEAQPFAEDFYPQVPYYSHAAELKAKVNHAVKLP
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHCCEEEECC
GNKQGHHVIVLMWIVANTGNAFYQAFDVDFK
CCCCCCEEEEEEEEEECCCCCEEEEEECCCC
>Mature Secondary Structure
MNQPQAQTQLRHGRVISPASRGAVAIEQGLLGGWQVNEMEGGKNFPALAAGPFPAPFESD
CCCCHHHHHHHCCCEECCCCCCCEEECCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCC
NPSVVPPADGYILSGGKNDARDCVNFTAEEMSKKLGRPFSWPLLNVTPGQTLEVKWEYTA
CCCEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEECC
PHTTRGYRWLITKDGWDPKQRITRAQLEAQPFAEDFYPQVPYYSHAAELKAKVNHAVKLP
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHCCEEEECC
GNKQGHHVIVLMWIVANTGNAFYQAFDVDFK
CCCCCCEEEEEEEEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]