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The map label for this gene is ydfF [H]

Identifier: 77459693

GI number: 77459693

Start: 3956568

End: 3957329

Strand: Reverse

Name: ydfF [H]

Synonym: Pfl01_3471

Alternate gene names: 77459693

Gene position: 3957329-3956568 (Counterclockwise)

Preceding gene: 77459695

Following gene: 77459691

Centisome position: 61.46

GC content: 64.3

Gene sequence:

>762_bases
ATGCACGCAGAACATCAAGACATCGGCGTCTCGCAAGTGGCCGCCGCCATCGCGGAACCGGCGCGGACCAAAATGCTGTG
CTCGCTGATGGACGGCCACGCCCGCACCGCCACCGAGCTGGCAACCCTTGCCGAAGTCAGCGCCTCGACCGCCAGCGCAC
ACCTGGCCAAGCTCAAGGATCTGGCCTTGGTGCGCCTGCATGTGCAGGGCCGCCACCGTTATTACAGCCTCGCCGACAAG
CGCGTGGCCCAGGCGCTGGAAGCGCTGATGGTGATCGGACAGAACTCCGCACCGACCTTCAAGCCGCATACACCGGATCG
CCTGCAATTCGCCCGCACCTGCTACGACCACATGGCCGGGACGCTGGCGGTGTTGTTGCATGACCGCTTGCTGGAGACGG
GATGGCTGGTGGAAACCGATGAACAGGTTTATCGCCTCAGTGAAAGTGGCGAGGCGTTTTTTGAAGGGCTGGGTATTGAG
GTCAAGGATCTGTCGACGTTGCGCCGACGGTTCGCCTGCCCGTGTCTGGACTGGAGCATGCGCCGGCCGCATCTGGGCGG
TTCGCTCGGTGCGGCGTTGTTGCAGGCGGCGCTGAAGCGCAAATGGGTGACGCAGGATCTGGACAGTCGGGCGCTGACGT
TGACGGTGCAGGGGCGCCGAGAATTGTCATCGCGCTGGGGGCTGGTTTTGCCCGAAGCCGGGCGGGATTCGTCAGGTCGC
CAGTTGGCTGATTCCACGCCCGGATCGGTGCATGCGCGTTAG

Upstream 100 bases:

>100_bases
CGCCGCGATGATCGGGTCCATGGATCGCAACCTTGTCGGTGGGGAAAGTGTTGCTACTATCTCCAGTCCTTGAGGGCGAT
GATTCGTCCGGGAGCGAAAT

Downstream 100 bases:

>100_bases
CTCAAGGTGTATCCGCTGTCGACTACCCAGTCCTGACCGATGACGCCGCGTGCGCCATTGCCCAGCTGGAACAGAATGAC
GTCGGCCACTGCCGCAGGTT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MHAEHQDIGVSQVAAAIAEPARTKMLCSLMDGHARTATELATLAEVSASTASAHLAKLKDLALVRLHVQGRHRYYSLADK
RVAQALEALMVIGQNSAPTFKPHTPDRLQFARTCYDHMAGTLAVLLHDRLLETGWLVETDEQVYRLSESGEAFFEGLGIE
VKDLSTLRRRFACPCLDWSMRRPHLGGSLGAALLQAALKRKWVTQDLDSRALTLTVQGRRELSSRWGLVLPEAGRDSSGR
QLADSTPGSVHAR

Sequences:

>Translated_253_residues
MHAEHQDIGVSQVAAAIAEPARTKMLCSLMDGHARTATELATLAEVSASTASAHLAKLKDLALVRLHVQGRHRYYSLADK
RVAQALEALMVIGQNSAPTFKPHTPDRLQFARTCYDHMAGTLAVLLHDRLLETGWLVETDEQVYRLSESGEAFFEGLGIE
VKDLSTLRRRFACPCLDWSMRRPHLGGSLGAALLQAALKRKWVTQDLDSRALTLTVQGRRELSSRWGLVLPEAGRDSSGR
QLADSTPGSVHAR
>Mature_253_residues
MHAEHQDIGVSQVAAAIAEPARTKMLCSLMDGHARTATELATLAEVSASTASAHLAKLKDLALVRLHVQGRHRYYSLADK
RVAQALEALMVIGQNSAPTFKPHTPDRLQFARTCYDHMAGTLAVLLHDRLLETGWLVETDEQVYRLSESGEAFFEGLGIE
VKDLSTLRRRFACPCLDWSMRRPHLGGSLGAALLQAALKRKWVTQDLDSRALTLTVQGRRELSSRWGLVLPEAGRDSSGR
QLADSTPGSVHAR

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 27798; Mature: 27798

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAEHQDIGVSQVAAAIAEPARTKMLCSLMDGHARTATELATLAEVSASTASAHLAKLKD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LALVRLHVQGRHRYYSLADKRVAQALEALMVIGQNSAPTFKPHTPDRLQFARTCYDHMAG
HHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TLAVLLHDRLLETGWLVETDEQVYRLSESGEAFFEGLGIEVKDLSTLRRRFACPCLDWSM
HHHHHHHHHHHHCCCEEECHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
RRPHLGGSLGAALLQAALKRKWVTQDLDSRALTLTVQGRRELSSRWGLVLPEAGRDSSGR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCEEECCCCCCCCCC
QLADSTPGSVHAR
CCCCCCCCCCCCC
>Mature Secondary Structure
MHAEHQDIGVSQVAAAIAEPARTKMLCSLMDGHARTATELATLAEVSASTASAHLAKLKD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LALVRLHVQGRHRYYSLADKRVAQALEALMVIGQNSAPTFKPHTPDRLQFARTCYDHMAG
HHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TLAVLLHDRLLETGWLVETDEQVYRLSESGEAFFEGLGIEVKDLSTLRRRFACPCLDWSM
HHHHHHHHHHHHCCCEEECHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
RRPHLGGSLGAALLQAALKRKWVTQDLDSRALTLTVQGRRELSSRWGLVLPEAGRDSSGR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCEEECCCCCCCCCC
QLADSTPGSVHAR
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]