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The map label for this gene is 77459691

Identifier: 77459691

GI number: 77459691

Start: 3954345

End: 3955565

Strand: Reverse

Name: 77459691

Synonym: Pfl01_3469

Alternate gene names: NA

Gene position: 3955565-3954345 (Counterclockwise)

Preceding gene: 77459693

Following gene: 77459690

Centisome position: 61.44

GC content: 61.34

Gene sequence:

>1221_bases
ATGCAAATCATCGACAAGCTCAGCATCCTCGCCGACGCCGCCAAGTACGACGCCTCCTGCGCCAGCAGTGGCGCGCCCAA
GCGCAGTTCCGAAGGCAAGGACGGGCTGGGTTCGACTGATGGCATGGGCATTTGCCACAGCTACACGCCGGACGGGCGTT
GTGTGTCGCTGCTCAAGATTCTGCTGACCAATTTCTGTCTCTACGACTGCCAATACTGCGTCAACCGCCGTTCCAGCGAC
GTGCCCCGTGCGCGTTTCACGCCCGAGGAAGTGGTGACGCTGACCCTGGATTTCTACCGGCGCAATTGCGTCAGCGGGTT
GTTTCTCAGCTCGGGGATCATTCGTTCGGCGGACTACACCATGGAGCAACTGGTGCGTGTCGCGAAGTTGCTGCGCGAAG
AGCATGAGTTCCGTGGCTACATTCATCTCAAAACCATTCCCGATGCGGATCCCGCGCTGATCGAAGAGGCCGGGCGTTAC
GCCGATCGCCTGAGCGTCAACATCGAATTGCCCACGGATGCCAGCCTGCAAACCCTGGCGCCGGAGAAGCACATCGGTTC
GATCAAGCAGGCGATGAACACCATCTACACCGGTGTGCAGACCGTGCTCAACGAACCCCGCGCACCAAAGTTCGCCCCGG
CCGGGCAGAGTACGCAGATGATTGTGGGTGCCGATGACACCGACGACAGCACCATCCTGCACAGCGCGCAGGCGCTTTAC
GGCAACTTCCGTCTGCGCCGGGTCTATTACTCGGCCTTCAGCCCGATTCCCGACAGCCCGAAAAGCGTGCCTTTGGCCGC
ACCGCCGCTGATGCGCGAGCACCGCTTGTATCAGGCGGATTTTCTGTTGCGCGGTTATGGCTATACCGCCGGTGAGTTGC
TTCAGGGGCCGGGCAATCTGGCGTTGGACATCGACCCGAAACTGGCCTGGGCGCTGCAGAACCGCGAGGTGTTCCCGCTG
GACCTCAATCGCGCCGAACCGGCGTTGATTTCACGCATCCCCGGCATCGGCTTGCGCACCACCGAACGTCTGGTGGAACT
GCGTCGGCAGCGGCGCATTCGCTACGAAGACGTGGCGCGCATGCGCTGTGTGCTGGCCAAAGCCAAGCCGTTCATCATCA
CCAGCGATTACCACCCTCAGCAGGCGGAAGTCACCAGCCAGATGCTTTATCAGCAATTGCGCGACCGACCAATGCCGCAA
CAGATGGGGCTGTGGGGATGA

Upstream 100 bases:

>100_bases
TGACTCCTGCGGTGCGACATTCCGACGAAGAGCGGCATTGCACCTTGTGTGAGCCAATCGCTGTCTATACTGTATATGCG
AACAGTATCGAGTCAGTGCC

Downstream 100 bases:

>100_bases
TCAATCTCGACTGCGACGACCTGTTCGACACCTGGCGCCAGCAGGCGCGCTGGCTGCTCAGCCATGAAATTGATCCGAGT
CTGGTGAGCTGGGCGTCGGA

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MQIIDKLSILADAAKYDASCASSGAPKRSSEGKDGLGSTDGMGICHSYTPDGRCVSLLKILLTNFCLYDCQYCVNRRSSD
VPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYTMEQLVRVAKLLREEHEFRGYIHLKTIPDADPALIEEAGRY
ADRLSVNIELPTDASLQTLAPEKHIGSIKQAMNTIYTGVQTVLNEPRAPKFAPAGQSTQMIVGADDTDDSTILHSAQALY
GNFRLRRVYYSAFSPIPDSPKSVPLAAPPLMREHRLYQADFLLRGYGYTAGELLQGPGNLALDIDPKLAWALQNREVFPL
DLNRAEPALISRIPGIGLRTTERLVELRRQRRIRYEDVARMRCVLAKAKPFIITSDYHPQQAEVTSQMLYQQLRDRPMPQ
QMGLWG

Sequences:

>Translated_406_residues
MQIIDKLSILADAAKYDASCASSGAPKRSSEGKDGLGSTDGMGICHSYTPDGRCVSLLKILLTNFCLYDCQYCVNRRSSD
VPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYTMEQLVRVAKLLREEHEFRGYIHLKTIPDADPALIEEAGRY
ADRLSVNIELPTDASLQTLAPEKHIGSIKQAMNTIYTGVQTVLNEPRAPKFAPAGQSTQMIVGADDTDDSTILHSAQALY
GNFRLRRVYYSAFSPIPDSPKSVPLAAPPLMREHRLYQADFLLRGYGYTAGELLQGPGNLALDIDPKLAWALQNREVFPL
DLNRAEPALISRIPGIGLRTTERLVELRRQRRIRYEDVARMRCVLAKAKPFIITSDYHPQQAEVTSQMLYQQLRDRPMPQ
QMGLWG
>Mature_406_residues
MQIIDKLSILADAAKYDASCASSGAPKRSSEGKDGLGSTDGMGICHSYTPDGRCVSLLKILLTNFCLYDCQYCVNRRSSD
VPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYTMEQLVRVAKLLREEHEFRGYIHLKTIPDADPALIEEAGRY
ADRLSVNIELPTDASLQTLAPEKHIGSIKQAMNTIYTGVQTVLNEPRAPKFAPAGQSTQMIVGADDTDDSTILHSAQALY
GNFRLRRVYYSAFSPIPDSPKSVPLAAPPLMREHRLYQADFLLRGYGYTAGELLQGPGNLALDIDPKLAWALQNREVFPL
DLNRAEPALISRIPGIGLRTTERLVELRRQRRIRYEDVARMRCVLAKAKPFIITSDYHPQQAEVTSQMLYQQLRDRPMPQ
QMGLWG

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45460; Mature: 45460

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIDKLSILADAAKYDASCASSGAPKRSSEGKDGLGSTDGMGICHSYTPDGRCVSLLKI
CCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
LLTNFCLYDCQYCVNRRSSDVPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYT
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHCCCCCCCHHH
MEQLVRVAKLLREEHEFRGYIHLKTIPDADPALIEEAGRYADRLSVNIELPTDASLQTLA
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHCC
PEKHIGSIKQAMNTIYTGVQTVLNEPRAPKFAPAGQSTQMIVGADDTDDSTILHSAQALY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
GNFRLRRVYYSAFSPIPDSPKSVPLAAPPLMREHRLYQADFLLRGYGYTAGELLQGPGNL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHCCCCCE
ALDIDPKLAWALQNREVFPLDLNRAEPALISRIPGIGLRTTERLVELRRQRRIRYEDVAR
EEEECCCEEEEECCCEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
MRCVLAKAKPFIITSDYHPQQAEVTSQMLYQQLRDRPMPQQMGLWG
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCC
>Mature Secondary Structure
MQIIDKLSILADAAKYDASCASSGAPKRSSEGKDGLGSTDGMGICHSYTPDGRCVSLLKI
CCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
LLTNFCLYDCQYCVNRRSSDVPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYT
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHCCCCCCCHHH
MEQLVRVAKLLREEHEFRGYIHLKTIPDADPALIEEAGRYADRLSVNIELPTDASLQTLA
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEECCCCCCHHHCC
PEKHIGSIKQAMNTIYTGVQTVLNEPRAPKFAPAGQSTQMIVGADDTDDSTILHSAQALY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
GNFRLRRVYYSAFSPIPDSPKSVPLAAPPLMREHRLYQADFLLRGYGYTAGELLQGPGNL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHCCCCCE
ALDIDPKLAWALQNREVFPLDLNRAEPALISRIPGIGLRTTERLVELRRQRRIRYEDVAR
EEEECCCEEEEECCCEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
MRCVLAKAKPFIITSDYHPQQAEVTSQMLYQQLRDRPMPQQMGLWG
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA