Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459671

Identifier: 77459671

GI number: 77459671

Start: 3933119

End: 3934774

Strand: Reverse

Name: 77459671

Synonym: Pfl01_3449

Alternate gene names: NA

Gene position: 3934774-3933119 (Counterclockwise)

Preceding gene: 77459679

Following gene: 77459670

Centisome position: 61.11

GC content: 62.92

Gene sequence:

>1656_bases
ATGGATCAATACGCCCCGCGCAACTGGCAGCCGCACGAGAAGCCCAGTCTGCCCGGTTCCCCCTCGACGCCGCTGCATTC
CAACCCCAAGCGCCTGGCTTATGCGCTGGTGGGCGTGCTTGTCGCGGTGACCGGTGGTCTGGGCAATGCGCTGGTGGTCG
CCAACCTGCCTTACCTGCAAGGCGCGCTCGGGGCGACCACGGCGGAGATGGCCTGGCTGCCGGCGGCGTACGTGATGACC
AACGTGTCGATGAACCTGCTGCTGGTGAAGTTTCGTCAGCAGTTCGGCCTGCGGGCGTTCACCGAGGTGTTTCTGGTGCT
GTATGCGCTGGTGACCTTCGGCCATCTGTTTGTCAATGACCTGAATTCGGCGATCGCGGTGCGTGCAGCCCACGGCATGG
TCGGCGCGGCGCTCAGTTCGCTGGGCCTGTATTACATGGTGCAGGCGTTCCCGGCCAAATGGCGGATGAAGGCGCTGGTG
TTGGGCCTCGGCACCTCACAGCTGGCCTTGCCACTGGCGCGATTGTTTTCCGAAGACCTGCTGCAGATCGCCGAATGGCG
CGGCCTGTACCTGTTTGAATTGGGCATGGCGTTGCTGTCGCAGGGCTGCGTCTTGTTGCTCAAACTGCCGCCGGGTGACC
GCTTCAAGACCTTCGAACCCCTCGACTTCCTGACCTTTGCGATCCTTGCCAGTGGCGTGGCCCTGTTGTGCGCCGTGTTG
TCCCTGGGCCGGATCGACTGGTGGCTGGAGGCCGACTGGATCGGCATCGCCTTGGCCGCATCGATTGTCCTGATTCTCGC
GGGGCTGGCCATCGAACATAACCGCAGCAATCCGATGCTGATGACCCGCTGGCTCGGCAGCGGGGTAATGATCCGCCTGG
CGCTGGCGGTGATCCTGATTCGCATGGTGACCTCGGAGCAATCCACCGGCGCCGTGGGCTTCATGCAGAACCTGAACATG
AGCAGCCAGCAGCTTCATAGCCTGTATGTGGTGATGCTGATCGGCAGCGTCGCCGGGCTGCTGACCAGTGCGCTGACCAT
CGACCCGAAACACCTGCTGATGCCGCTGATCGTTTCGCTGGCGTTGATGGCCACCGGCTCGATCATGGACAGCTCATCGA
GCAATCTGACCCGCCCCGGCAACCTGTATTTCAGCCAGTTCCTGCTGGCGTTCGGCAGTACCTTCTTCCTCGGCCCGACC
ATGGTGCTGGGCACGCGCAACGTGCTGACCAATCCGCGCAACCTCGTGAGTTTTTCGGTGTTGTTCGGGATCTGCAACAA
CCTCGGCGGCCTGATCGGCGCGGCGTTGCTGGGGACGTTCCAGATCGTGCGCGAGAAGTTTCATTCCAGCCACATCGTCG
AGCAACTGGTGATGTCCGACCCGCGTGTCGCCGCCCGGGTGCAGAGCGGCGGGTCGGCGGTTGGCTCGCTGATTGCCGAC
CCGAGCCTGCGCAATCTGCAAGGCATTCGCAGCCTGGCCAACGCCGCCACCCGCGAAGCCAACGTGCTGGCCTATAACGA
TGTGTTCATGCTGATCGCGGTGATCGCGATCCTGACCATGATCTGGATTTCCATCCGTGCGCTGTGGCTGATCAGCACCA
CCCGAGCCGTCGCCCCGACATCTTCCGTACCTTCCAGCGGTGCCACCTCTTCATGA

Upstream 100 bases:

>100_bases
AAAATTCCTTTGTGGAAGCGAGCAAGCTCGCTCCCACACTGGATAGGTGTTTGGCCAGGATTTGCGGCACACTTGAGCGA
CTAACAGACAAGGCCTTTCA

Downstream 100 bases:

>100_bases
CCGAACCGACCACCACAACCACCAATGCCATCGCCGCCACCCCTGAAGGCGTGGCGCCGCCGTCATCACCGAATACCGAG
CCGCGGTCGTTGCGGGTGCG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transport Protein Transmembrane; EmrB/QacA Subfamily Drug Resistance Transporter; Facilitator Superfamily Transporter; EmrB/QacA Family Drug Resistance Transporter; MFS Drug Efflux Transporter RmrB; Transporter Facilitator Family; Multidrug Resistance Protein B; Transmembrane Efflux Pump Protein; Tat Pathway Signal Sequence Domain Protein; MFS Drug Efflux Transporter; MFS Permease; LOW QUALITY PROTEIN MFS Drug Efflux Transporter; Efflux Protein; Facilitator Superfamily Transporter Protein; MFS Family Transporter; HlyD Family Protein; Facilitator Family Transporter; Drug Resistance Transporter EmrB/QacA Subfamily; Facilitator Superfamily Permease

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQGALGATTAEMAWLPAAYVMT
NVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVNDLNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALV
LGLGTSQLALPLARLFSEDLLQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL
SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILIRMVTSEQSTGAVGFMQNLNM
SSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSLALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPT
MVLGTRNVLTNPRNLVSFSVLFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD
PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPTSSVPSSGATSS

Sequences:

>Translated_551_residues
MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQGALGATTAEMAWLPAAYVMT
NVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVNDLNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALV
LGLGTSQLALPLARLFSEDLLQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL
SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILIRMVTSEQSTGAVGFMQNLNM
SSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSLALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPT
MVLGTRNVLTNPRNLVSFSVLFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD
PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPTSSVPSSGATSS
>Mature_551_residues
MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQGALGATTAEMAWLPAAYVMT
NVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVNDLNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALV
LGLGTSQLALPLARLFSEDLLQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL
SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILIRMVTSEQSTGAVGFMQNLNM
SSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSLALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPT
MVLGTRNVLTNPRNLVSFSVLFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD
PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPTSSVPSSGATSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59143; Mature: 59143

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH
GALGATTAEMAWLPAAYVMTNVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVND
HHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALVLGLGTSQLALPLARLFSEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL
HHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILI
HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHH
RMVTSEQSTGAVGFMQNLNMSSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSL
HHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPTMVLGTRNVLTNPRNLVSFSV
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCEEECHHHHCCCHHHHHHHH
LFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCC
PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPT
CCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSVPSSGATSS
CCCCCCCCCCC
>Mature Secondary Structure
MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH
GALGATTAEMAWLPAAYVMTNVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVND
HHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALVLGLGTSQLALPLARLFSEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL
HHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILI
HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHH
RMVTSEQSTGAVGFMQNLNMSSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSL
HHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPTMVLGTRNVLTNPRNLVSFSV
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCEEECHHHHCCCHHHHHHHH
LFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCC
PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPT
CCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SSVPSSGATSS
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA