| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459671
Identifier: 77459671
GI number: 77459671
Start: 3933119
End: 3934774
Strand: Reverse
Name: 77459671
Synonym: Pfl01_3449
Alternate gene names: NA
Gene position: 3934774-3933119 (Counterclockwise)
Preceding gene: 77459679
Following gene: 77459670
Centisome position: 61.11
GC content: 62.92
Gene sequence:
>1656_bases ATGGATCAATACGCCCCGCGCAACTGGCAGCCGCACGAGAAGCCCAGTCTGCCCGGTTCCCCCTCGACGCCGCTGCATTC CAACCCCAAGCGCCTGGCTTATGCGCTGGTGGGCGTGCTTGTCGCGGTGACCGGTGGTCTGGGCAATGCGCTGGTGGTCG CCAACCTGCCTTACCTGCAAGGCGCGCTCGGGGCGACCACGGCGGAGATGGCCTGGCTGCCGGCGGCGTACGTGATGACC AACGTGTCGATGAACCTGCTGCTGGTGAAGTTTCGTCAGCAGTTCGGCCTGCGGGCGTTCACCGAGGTGTTTCTGGTGCT GTATGCGCTGGTGACCTTCGGCCATCTGTTTGTCAATGACCTGAATTCGGCGATCGCGGTGCGTGCAGCCCACGGCATGG TCGGCGCGGCGCTCAGTTCGCTGGGCCTGTATTACATGGTGCAGGCGTTCCCGGCCAAATGGCGGATGAAGGCGCTGGTG TTGGGCCTCGGCACCTCACAGCTGGCCTTGCCACTGGCGCGATTGTTTTCCGAAGACCTGCTGCAGATCGCCGAATGGCG CGGCCTGTACCTGTTTGAATTGGGCATGGCGTTGCTGTCGCAGGGCTGCGTCTTGTTGCTCAAACTGCCGCCGGGTGACC GCTTCAAGACCTTCGAACCCCTCGACTTCCTGACCTTTGCGATCCTTGCCAGTGGCGTGGCCCTGTTGTGCGCCGTGTTG TCCCTGGGCCGGATCGACTGGTGGCTGGAGGCCGACTGGATCGGCATCGCCTTGGCCGCATCGATTGTCCTGATTCTCGC GGGGCTGGCCATCGAACATAACCGCAGCAATCCGATGCTGATGACCCGCTGGCTCGGCAGCGGGGTAATGATCCGCCTGG CGCTGGCGGTGATCCTGATTCGCATGGTGACCTCGGAGCAATCCACCGGCGCCGTGGGCTTCATGCAGAACCTGAACATG AGCAGCCAGCAGCTTCATAGCCTGTATGTGGTGATGCTGATCGGCAGCGTCGCCGGGCTGCTGACCAGTGCGCTGACCAT CGACCCGAAACACCTGCTGATGCCGCTGATCGTTTCGCTGGCGTTGATGGCCACCGGCTCGATCATGGACAGCTCATCGA GCAATCTGACCCGCCCCGGCAACCTGTATTTCAGCCAGTTCCTGCTGGCGTTCGGCAGTACCTTCTTCCTCGGCCCGACC ATGGTGCTGGGCACGCGCAACGTGCTGACCAATCCGCGCAACCTCGTGAGTTTTTCGGTGTTGTTCGGGATCTGCAACAA CCTCGGCGGCCTGATCGGCGCGGCGTTGCTGGGGACGTTCCAGATCGTGCGCGAGAAGTTTCATTCCAGCCACATCGTCG AGCAACTGGTGATGTCCGACCCGCGTGTCGCCGCCCGGGTGCAGAGCGGCGGGTCGGCGGTTGGCTCGCTGATTGCCGAC CCGAGCCTGCGCAATCTGCAAGGCATTCGCAGCCTGGCCAACGCCGCCACCCGCGAAGCCAACGTGCTGGCCTATAACGA TGTGTTCATGCTGATCGCGGTGATCGCGATCCTGACCATGATCTGGATTTCCATCCGTGCGCTGTGGCTGATCAGCACCA CCCGAGCCGTCGCCCCGACATCTTCCGTACCTTCCAGCGGTGCCACCTCTTCATGA
Upstream 100 bases:
>100_bases AAAATTCCTTTGTGGAAGCGAGCAAGCTCGCTCCCACACTGGATAGGTGTTTGGCCAGGATTTGCGGCACACTTGAGCGA CTAACAGACAAGGCCTTTCA
Downstream 100 bases:
>100_bases CCGAACCGACCACCACAACCACCAATGCCATCGCCGCCACCCCTGAAGGCGTGGCGCCGCCGTCATCACCGAATACCGAG CCGCGGTCGTTGCGGGTGCG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transport Protein Transmembrane; EmrB/QacA Subfamily Drug Resistance Transporter; Facilitator Superfamily Transporter; EmrB/QacA Family Drug Resistance Transporter; MFS Drug Efflux Transporter RmrB; Transporter Facilitator Family; Multidrug Resistance Protein B; Transmembrane Efflux Pump Protein; Tat Pathway Signal Sequence Domain Protein; MFS Drug Efflux Transporter; MFS Permease; LOW QUALITY PROTEIN MFS Drug Efflux Transporter; Efflux Protein; Facilitator Superfamily Transporter Protein; MFS Family Transporter; HlyD Family Protein; Facilitator Family Transporter; Drug Resistance Transporter EmrB/QacA Subfamily; Facilitator Superfamily Permease
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQGALGATTAEMAWLPAAYVMT NVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVNDLNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALV LGLGTSQLALPLARLFSEDLLQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILIRMVTSEQSTGAVGFMQNLNM SSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSLALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPT MVLGTRNVLTNPRNLVSFSVLFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPTSSVPSSGATSS
Sequences:
>Translated_551_residues MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQGALGATTAEMAWLPAAYVMT NVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVNDLNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALV LGLGTSQLALPLARLFSEDLLQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILIRMVTSEQSTGAVGFMQNLNM SSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSLALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPT MVLGTRNVLTNPRNLVSFSVLFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPTSSVPSSGATSS >Mature_551_residues MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQGALGATTAEMAWLPAAYVMT NVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVNDLNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALV LGLGTSQLALPLARLFSEDLLQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILIRMVTSEQSTGAVGFMQNLNM SSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSLALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPT MVLGTRNVLTNPRNLVSFSVLFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPTSSVPSSGATSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59143; Mature: 59143
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH GALGATTAEMAWLPAAYVMTNVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVND HHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALVLGLGTSQLALPLARLFSEDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL HHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILI HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHH RMVTSEQSTGAVGFMQNLNMSSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSL HHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPTMVLGTRNVLTNPRNLVSFSV HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCEEECHHHHCCCHHHHHHHH LFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCC PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPT CCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSVPSSGATSS CCCCCCCCCCC >Mature Secondary Structure MDQYAPRNWQPHEKPSLPGSPSTPLHSNPKRLAYALVGVLVAVTGGLGNALVVANLPYLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH GALGATTAEMAWLPAAYVMTNVSMNLLLVKFRQQFGLRAFTEVFLVLYALVTFGHLFVND HHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LNSAIAVRAAHGMVGAALSSLGLYYMVQAFPAKWRMKALVLGLGTSQLALPLARLFSEDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LQIAEWRGLYLFELGMALLSQGCVLLLKLPPGDRFKTFEPLDFLTFAILASGVALLCAVL HHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLGRIDWWLEADWIGIALAASIVLILAGLAIEHNRSNPMLMTRWLGSGVMIRLALAVILI HHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHHHHH RMVTSEQSTGAVGFMQNLNMSSQQLHSLYVVMLIGSVAGLLTSALTIDPKHLLMPLIVSL HHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALMATGSIMDSSSSNLTRPGNLYFSQFLLAFGSTFFLGPTMVLGTRNVLTNPRNLVSFSV HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCEEECHHHHCCCHHHHHHHH LFGICNNLGGLIGAALLGTFQIVREKFHSSHIVEQLVMSDPRVAARVQSGGSAVGSLIAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHCC PSLRNLQGIRSLANAATREANVLAYNDVFMLIAVIAILTMIWISIRALWLISTTRAVAPT CCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SSVPSSGATSS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA