| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459639
Identifier: 77459639
GI number: 77459639
Start: 3898370
End: 3898792
Strand: Reverse
Name: 77459639
Synonym: Pfl01_3417
Alternate gene names: NA
Gene position: 3898792-3898370 (Counterclockwise)
Preceding gene: 77459642
Following gene: 77459627
Centisome position: 60.56
GC content: 64.3
Gene sequence:
>423_bases ATGCCTTGTTCACGAAGGAGCTTTGAAATGGGCTGCCCGCAAGTCTGTGCCAGCGCCACCCTGCAATGCAGTTTCGGCGC CGCACCGGCGGTGCTCAACGTGCTGCCGGTCAATCGCACGCTGACTGGCGGGATGCCGGCGGCGAACATCATGGATCATA TTCCGCTGGTCAACGTCACCACGTTCGGCATGTGCATGAGCATGGCCAACCCGATGGTCGCGGCTGCCACGGCTGCGGCG CTGGGCGTGTTGACGCCGATGCCGTGCATTCCCGCCACCGCCACGCCGTGGATCCCCGGCGGCGCGCCGACCCTGCTGCT GGGCGGGATGCCGGCAATTGATGCCAACAGCACGTTGATGTGCAACTGGGCGGGGGTGATCAAGATCGTGATGCCGGGGC AGATGCAGATGTTGATTCCCTGA
Upstream 100 bases:
>100_bases CGGTCACAAGCGCGGTTCGGTCTTATAGGTTAGCGTGTTGGACGATAATCACCTTTGGGAATGTGCGCGGCGGGCCGCAG GCGACTAAGGTTTAGCGCGT
Downstream 100 bases:
>100_bases GTCAGGCCTGCGCCGGATCCGTCCATTTGCGAAACCACCAGCGCACCCGGGAAATCGGTTTGCCATCGGCATCCAGCGGC CGCCCGTCCTCGGCAAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPCSRRSFEMGCPQVCASATLQCSFGAAPAVLNVLPVNRTLTGGMPAANIMDHIPLVNVTTFGMCMSMANPMVAAATAAA LGVLTPMPCIPATATPWIPGGAPTLLLGGMPAIDANSTLMCNWAGVIKIVMPGQMQMLIP
Sequences:
>Translated_140_residues MPCSRRSFEMGCPQVCASATLQCSFGAAPAVLNVLPVNRTLTGGMPAANIMDHIPLVNVTTFGMCMSMANPMVAAATAAA LGVLTPMPCIPATATPWIPGGAPTLLLGGMPAIDANSTLMCNWAGVIKIVMPGQMQMLIP >Mature_139_residues PCSRRSFEMGCPQVCASATLQCSFGAAPAVLNVLPVNRTLTGGMPAANIMDHIPLVNVTTFGMCMSMANPMVAAATAAAL GVLTPMPCIPATATPWIPGGAPTLLLGGMPAIDANSTLMCNWAGVIKIVMPGQMQMLIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14344; Mature: 14213
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 10.0 %Met (Translated Protein) 15.0 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 9.4 %Met (Mature Protein) 14.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCSRRSFEMGCPQVCASATLQCSFGAAPAVLNVLPVNRTLTGGMPAANIMDHIPLVNVT CCCCCCCCCCCCHHHHHHCEEEECCCCCCCEEEEEECCCEECCCCCHHHHHHCCCCCCHH TFGMCMSMANPMVAAATAAALGVLTPMPCIPATATPWIPGGAPTLLLGGMPAIDANSTLM HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEE CNWAGVIKIVMPGQMQMLIP EECCCEEEEEECCCEEEECC >Mature Secondary Structure PCSRRSFEMGCPQVCASATLQCSFGAAPAVLNVLPVNRTLTGGMPAANIMDHIPLVNVT CCCCCCCCCCCHHHHHHCEEEECCCCCCCEEEEEECCCEECCCCCHHHHHHCCCCCCHH TFGMCMSMANPMVAAATAAALGVLTPMPCIPATATPWIPGGAPTLLLGGMPAIDANSTLM HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEE CNWAGVIKIVMPGQMQMLIP EECCCEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA