| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459627
Identifier: 77459627
GI number: 77459627
Start: 3885017
End: 3885463
Strand: Reverse
Name: 77459627
Synonym: Pfl01_3405
Alternate gene names: NA
Gene position: 3885463-3885017 (Counterclockwise)
Preceding gene: 77459639
Following gene: 77459626
Centisome position: 60.35
GC content: 60.63
Gene sequence:
>447_bases TTGTCTGCACGACTTTTTCTAACGTTCGGGTTTGCGCTGCTCGCCGGCTGTTCGTTTTTCGGGCCGAAAGTGGATCTCGA CAGCCTGACCCTCGACGTCGCGCCCAAGGCCAATGACGACACCCCGATCGCCGTGGACTTCATCGCGGTCAACGATCCGG ATCTGCTCAAGCAACTGTCGGGCATCAGTGCCCGTCAGTGGTTTGCCGAGCGCGAGCAGTATCAGCGTGACTATCGTCAG CTGATGAGCGTGTGGGGACTGGAGCTGGTGCCGGGGCAATTCATCGACCGCCAGCCGTTCCCTTTGGGGGGCAAGCGGGC GGCTGGACTTTTGGTCTTCGCCAGCTATAACACTCCCGGAGCGCACCGCCTGCGGCTGGACGATCAGAGCGACGCATGGC TCAAGTTCGACAGTCGCGAGATGAGCCTGGTCAGCAAGGAAAACTGA
Upstream 100 bases:
>100_bases TTCGGCTGTAGGAACCGAACTACCCAAGACGCTAGAACAGGTCTATAAAAATGCAAGCGAAAAACTTTTTTGGACTGACT GGCGAAAAGGAAAATTCATT
Downstream 100 bases:
>100_bases AACACACCGTCCGCCGCCGGTTCGCGGTGCAGTCGAAGGGAGTCGTATGAGTCTGCTACCTGACGCGGTCTGCTGGCATG AAGGCATGCAATTGCTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSARLFLTFGFALLAGCSFFGPKVDLDSLTLDVAPKANDDTPIAVDFIAVNDPDLLKQLSGISARQWFAEREQYQRDYRQ LMSVWGLELVPGQFIDRQPFPLGGKRAAGLLVFASYNTPGAHRLRLDDQSDAWLKFDSREMSLVSKEN
Sequences:
>Translated_148_residues MSARLFLTFGFALLAGCSFFGPKVDLDSLTLDVAPKANDDTPIAVDFIAVNDPDLLKQLSGISARQWFAEREQYQRDYRQ LMSVWGLELVPGQFIDRQPFPLGGKRAAGLLVFASYNTPGAHRLRLDDQSDAWLKFDSREMSLVSKEN >Mature_147_residues SARLFLTFGFALLAGCSFFGPKVDLDSLTLDVAPKANDDTPIAVDFIAVNDPDLLKQLSGISARQWFAEREQYQRDYRQL MSVWGLELVPGQFIDRQPFPLGGKRAAGLLVFASYNTPGAHRLRLDDQSDAWLKFDSREMSLVSKEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16602; Mature: 16471
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARLFLTFGFALLAGCSFFGPKVDLDSLTLDVAPKANDDTPIAVDFIAVNDPDLLKQLS CCCEEEHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHC GISARQWFAEREQYQRDYRQLMSVWGLELVPGQFIDRQPFPLGGKRAAGLLVFASYNTPG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC AHRLRLDDQSDAWLKFDSREMSLVSKEN CEEEEECCCCCCEEEECCCCEEEEECCC >Mature Secondary Structure SARLFLTFGFALLAGCSFFGPKVDLDSLTLDVAPKANDDTPIAVDFIAVNDPDLLKQLS CCEEEHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCHHHHHHHC GISARQWFAEREQYQRDYRQLMSVWGLELVPGQFIDRQPFPLGGKRAAGLLVFASYNTPG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC AHRLRLDDQSDAWLKFDSREMSLVSKEN CEEEEECCCCCCEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA