| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459496
Identifier: 77459496
GI number: 77459496
Start: 3756408
End: 3757070
Strand: Reverse
Name: 77459496
Synonym: Pfl01_3274
Alternate gene names: NA
Gene position: 3757070-3756408 (Counterclockwise)
Preceding gene: 77459497
Following gene: 77459493
Centisome position: 58.35
GC content: 59.58
Gene sequence:
>663_bases ATGACCACAGCCCTGAGCGGGAAAGAAGCGGTAGGTGAGCGTTTTGTGCTGGAAACCATGCGCCACGCCCAGCAGTTGAC CTGGAAGGCCGTGGACGAGATCGCCAAGGTGATCAAACCCGGTATGCGCGAATCTGAAGCCCATGCGCGGGGCAAGGAAA TTCTCGTCGAACTGGGCATGGACCGGATCTGGCATCCGCTGCTGATCCGCTTCGGCGCCAACACGCTGAAGACCTTCAAG GAGCGTTCCGACGGCGATCCGGTGCTGGGCGAGAACGACATTTTCTTCATCGACATGGGCGTGGTCTGGGAAGGTCACGA AGGCGATGCCGGGGCGACGTATGTCACCGGTTCCGACCCACAAATGGTCGCTTGCGCGGCGGCCTCCAAAGAACTCTTCG ACAAGGTCGAAACCTTCTGGCGCAAGGGCGTGACCGGTGTCGGGCTGTACCGTTACGCCACCGATCAGGCCGAGGCGATG GGTTGGAAACTGAACCTGGACATCAAGGGCCACCGGGTCAGCGATTTCCCTCACGCGATCTATCGCGGCGGCAATCTTGG TGACTTCGATCAGGCGCCGAATGCCGGTGTGTGGATTCTGGAAATCCAGATCGAACACCCCGAGCTTCCGTACGGCGCTT TCTATGAGGACCTGCTTATTTGA
Upstream 100 bases:
>100_bases GAAGAGAATTGACACGTTGTGTCATGGTTGTATCTTAGGCGTCCTGTTTCGCAATATAAAAAACTATACAGCGCAAGCGA TTAGCCAGAAGGAATCAGCG
Downstream 100 bases:
>100_bases TTGAACAAGCATGCCCGATTCGGTGATCCGCCGAACCGGGCATTTTTTATTGGCCGTCGATGCTGCGGGGCAGATCGAGT GGATTGGCGTCGCGCAACAC
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: Methionyl Aminopeptidase; Peptidase M; M24 Family Peptidase; AIG2 Family Protein; Ferredoxin
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTTALSGKEAVGERFVLETMRHAQQLTWKAVDEIAKVIKPGMRESEAHARGKEILVELGMDRIWHPLLIRFGANTLKTFK ERSDGDPVLGENDIFFIDMGVVWEGHEGDAGATYVTGSDPQMVACAAASKELFDKVETFWRKGVTGVGLYRYATDQAEAM GWKLNLDIKGHRVSDFPHAIYRGGNLGDFDQAPNAGVWILEIQIEHPELPYGAFYEDLLI
Sequences:
>Translated_220_residues MTTALSGKEAVGERFVLETMRHAQQLTWKAVDEIAKVIKPGMRESEAHARGKEILVELGMDRIWHPLLIRFGANTLKTFK ERSDGDPVLGENDIFFIDMGVVWEGHEGDAGATYVTGSDPQMVACAAASKELFDKVETFWRKGVTGVGLYRYATDQAEAM GWKLNLDIKGHRVSDFPHAIYRGGNLGDFDQAPNAGVWILEIQIEHPELPYGAFYEDLLI >Mature_219_residues TTALSGKEAVGERFVLETMRHAQQLTWKAVDEIAKVIKPGMRESEAHARGKEILVELGMDRIWHPLLIRFGANTLKTFKE RSDGDPVLGENDIFFIDMGVVWEGHEGDAGATYVTGSDPQMVACAAASKELFDKVETFWRKGVTGVGLYRYATDQAEAMG WKLNLDIKGHRVSDFPHAIYRGGNLGDFDQAPNAGVWILEIQIEHPELPYGAFYEDLLI
Specific function: Unknown
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24554; Mature: 24423
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALSGKEAVGERFVLETMRHAQQLTWKAVDEIAKVIKPGMRESEAHARGKEILVELGM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCH DRIWHPLLIRFGANTLKTFKERSDGDPVLGENDIFFIDMGVVWEGHEGDAGATYVTGSDP HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCC QMVACAAASKELFDKVETFWRKGVTGVGLYRYATDQAEAMGWKLNLDIKGHRVSDFPHAI CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCEEEEEEECCCCCCCCCHHH YRGGNLGDFDQAPNAGVWILEIQIEHPELPYGAFYEDLLI HCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCC >Mature Secondary Structure TTALSGKEAVGERFVLETMRHAQQLTWKAVDEIAKVIKPGMRESEAHARGKEILVELGM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCH DRIWHPLLIRFGANTLKTFKERSDGDPVLGENDIFFIDMGVVWEGHEGDAGATYVTGSDP HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCC QMVACAAASKELFDKVETFWRKGVTGVGLYRYATDQAEAMGWKLNLDIKGHRVSDFPHAI CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCEEEEEEECCCCCCCCCHHH YRGGNLGDFDQAPNAGVWILEIQIEHPELPYGAFYEDLLI HCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA