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The map label for this gene is ytfH [C]

Identifier: 77459493

GI number: 77459493

Start: 3753564

End: 3754061

Strand: Reverse

Name: ytfH [C]

Synonym: Pfl01_3271

Alternate gene names: 77459493

Gene position: 3754061-3753564 (Counterclockwise)

Preceding gene: 77459496

Following gene: 77459486

Centisome position: 58.31

GC content: 63.25

Gene sequence:

>498_bases
ATGGCTGTAAACGATACTCTTCCTGAGACCCTGTGCCCGATTTCCCGGGCCGAGGCGATCGTCGGCGACCGCTGGACGGT
GCTGGTTTTGCGCGAATTGTTCATGGGCAGCCATCGCTATGACGAGATCCTGGCGCAGACCGGCGGCACGCCGCAGATGG
TCGCCGCCCGTCTGAAAAGCCTGGAGGCGGACGGACTGGTCGAGCGCCGCTTGTACAACGAGCGGCCGAAACGCTACGAG
TACCACCTCACCGCAAAGGGTGAGGCGTTTTATCCGGTGGTGATCGCGCTGCGCGCCTGGGGCGAGACCTGGTGTAAATC
GCCGGAGGAGGGGCTGGCGGTGAACATGACCCACAAGAACTGCAACCACAGCGCCGGCCTCGGACCGATGTGCGATCACT
GCGGTGAAGTGTTGCGCCGTGAGGATCTGATCAGCCAGCCGCAAGAGGCGTACGCCGCCGAACGACAGGCGCGGCGTGAG
GCGTTCAAAGCTAAATAG

Upstream 100 bases:

>100_bases
TGACGATGTACTCCGGCAATGAGAGTGATCGATGCTCAGGGCTTGTTCCCGCATCGTGTTGATATGATAATCATAGTAAC
TGTGTAAGAGGCAAGCCCTG

Downstream 100 bases:

>100_bases
ACGGCTCCATCCAAAACAAAAAAAGGCCCTCATTTGCGAGGGCCTTCGCGTGTCAGCGCAAAACGGATGACTTACAGATT
GTTCGCCAGTTTTCCGGAAG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MAVNDTLPETLCPISRAEAIVGDRWTVLVLRELFMGSHRYDEILAQTGGTPQMVAARLKSLEADGLVERRLYNERPKRYE
YHLTAKGEAFYPVVIALRAWGETWCKSPEEGLAVNMTHKNCNHSAGLGPMCDHCGEVLRREDLISQPQEAYAAERQARRE
AFKAK

Sequences:

>Translated_165_residues
MAVNDTLPETLCPISRAEAIVGDRWTVLVLRELFMGSHRYDEILAQTGGTPQMVAARLKSLEADGLVERRLYNERPKRYE
YHLTAKGEAFYPVVIALRAWGETWCKSPEEGLAVNMTHKNCNHSAGLGPMCDHCGEVLRREDLISQPQEAYAAERQARRE
AFKAK
>Mature_164_residues
AVNDTLPETLCPISRAEAIVGDRWTVLVLRELFMGSHRYDEILAQTGGTPQMVAARLKSLEADGLVERRLYNERPKRYEY
HLTAKGEAFYPVVIALRAWGETWCKSPEEGLAVNMTHKNCNHSAGLGPMCDHCGEVLRREDLISQPQEAYAAERQARREA
FKAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 18646; Mature: 18514

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNDTLPETLCPISRAEAIVGDRWTVLVLRELFMGSHRYDEILAQTGGTPQMVAARLKS
CCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
LEADGLVERRLYNERPKRYEYHLTAKGEAFYPVVIALRAWGETWCKSPEEGLAVNMTHKN
CCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
CNHSAGLGPMCDHCGEVLRREDLISQPQEAYAAERQARREAFKAK
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVNDTLPETLCPISRAEAIVGDRWTVLVLRELFMGSHRYDEILAQTGGTPQMVAARLKS
CCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
LEADGLVERRLYNERPKRYEYHLTAKGEAFYPVVIALRAWGETWCKSPEEGLAVNMTHKN
CCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
CNHSAGLGPMCDHCGEVLRREDLISQPQEAYAAERQARREAFKAK
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]