| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459453
Identifier: 77459453
GI number: 77459453
Start: 3714495
End: 3715085
Strand: Direct
Name: 77459453
Synonym: Pfl01_3231
Alternate gene names: NA
Gene position: 3714495-3715085 (Clockwise)
Preceding gene: 77459450
Following gene: 77459454
Centisome position: 57.69
GC content: 61.59
Gene sequence:
>591_bases ATGAGTTTCGAAATCCGCAAGATCGTCAGCTATGTCGAAGAGACCTTCATCGAAGGCGGCAAGGCGTCCGACACCCCGGT GACCATGGTCGGCCTGGCCGTCGTGATGAAGAACCCGTGGGTCGGCAATGGCTTTGTCGAAGACCTCAAGCCGCAGATCC GCGCCAATTGCTCCGACCTCGGTGCGATGATGGTCGAGCGTCTGGTGGGCATCATCGACGGCGCCGAGAAGATCGAGGCC TACGGCAAAGCCGCGGTGGTCGGCGCTGATGGCGAAATCGAGCACGCGTCGGCGGTGATCCACACCCTGCGGTTCGGCAA CCACTACCGTGAAGCGGTCAAGGCCAAGAGCTACCTGAGCTTCACCAACAAGCGCGGCGGTCCGGGCACTTCGATCCAGA TCCCGATGATGCACAAGGATGACGAAGGCCTGCGCTCGCACTACATCACTCTGGAAATGCAGATCGAAGACGCCCCGCGC GCCGACGAAATCGTCGTGGTGCTCGGTTGCGCCGACGGTGGTCGCCTGCACCCGCGCATCGGCAACCGCTACATCGATCT GGAAGAACTGGCCGCCGAAAAAGCCCAGTAA
Upstream 100 bases:
>100_bases CCGACTGATGGCAGGGATTCTTGCGAGGGGGACTTGCACGATCGGTATTATGGTATACCATCAGACGCACAGACACTCTT TATCCCCTACGGAGCAGCTC
Downstream 100 bases:
>100_bases TCACAATAAAAAAGGCATTGCAGGAGCGCTCCATGATTCGGCTCACCGCTGAACTCACCCCGGCCGGCACCAGTTATCTG GCGACAGGCGTTGGCCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSFEIRKIVSYVEETFIEGGKASDTPVTMVGLAVVMKNPWVGNGFVEDLKPQIRANCSDLGAMMVERLVGIIDGAEKIEA YGKAAVVGADGEIEHASAVIHTLRFGNHYREAVKAKSYLSFTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMQIEDAPR ADEIVVVLGCADGGRLHPRIGNRYIDLEELAAEKAQ
Sequences:
>Translated_196_residues MSFEIRKIVSYVEETFIEGGKASDTPVTMVGLAVVMKNPWVGNGFVEDLKPQIRANCSDLGAMMVERLVGIIDGAEKIEA YGKAAVVGADGEIEHASAVIHTLRFGNHYREAVKAKSYLSFTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMQIEDAPR ADEIVVVLGCADGGRLHPRIGNRYIDLEELAAEKAQ >Mature_195_residues SFEIRKIVSYVEETFIEGGKASDTPVTMVGLAVVMKNPWVGNGFVEDLKPQIRANCSDLGAMMVERLVGIIDGAEKIEAY GKAAVVGADGEIEHASAVIHTLRFGNHYREAVKAKSYLSFTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMQIEDAPRA DEIVVVLGCADGGRLHPRIGNRYIDLEELAAEKAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21430; Mature: 21299
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEIRKIVSYVEETFIEGGKASDTPVTMVGLAVVMKNPWVGNGFVEDLKPQIRANCSDL CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHCCHHHH GAMMVERLVGIIDGAEKIEAYGKAAVVGADGEIEHASAVIHTLRFGNHYREAVKAKSYLS HHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH FTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMQIEDAPRADEIVVVLGCADGGRLHPRI HHCCCCCCCCEEEEEEEECCCCCCHHEEEEEEEEECCCCCCCCEEEEEECCCCCEECCCC GNRYIDLEELAAEKAQ CCEEECHHHHHHHCCC >Mature Secondary Structure SFEIRKIVSYVEETFIEGGKASDTPVTMVGLAVVMKNPWVGNGFVEDLKPQIRANCSDL CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHCCHHHH GAMMVERLVGIIDGAEKIEAYGKAAVVGADGEIEHASAVIHTLRFGNHYREAVKAKSYLS HHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH FTNKRGGPGTSIQIPMMHKDDEGLRSHYITLEMQIEDAPRADEIVVVLGCADGGRLHPRI HHCCCCCCCCEEEEEEEECCCCCCHHEEEEEEEEECCCCCCCCEEEEEECCCCCEECCCC GNRYIDLEELAAEKAQ CCEEECHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA