| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is catD [H]
Identifier: 77459454
GI number: 77459454
Start: 3715118
End: 3715951
Strand: Direct
Name: catD [H]
Synonym: Pfl01_3232
Alternate gene names: 77459454
Gene position: 3715118-3715951 (Clockwise)
Preceding gene: 77459453
Following gene: 77459455
Centisome position: 57.7
GC content: 65.23
Gene sequence:
>834_bases ATGATTCGGCTCACCGCTGAACTCACCCCGGCCGGCACCAGTTATCTGGCGACAGGCGTTGGCCAACCCGTGGTGTTGAT CCACGGCGTGGGCTTGAACAAAGAAATGTGGGGCGGCCAGATCGTTGGCCTGGCCACGCAATACCGGGTGATCGCCTACG ACATGCTCGGCCATGGCGCCAGCCCGCGACCGGCCAGCGGCACCGCCCTGCTCGGCTATGCCGATCAGTTGCTGGAGCTG CTCGACCACCTGCAATTGCCCGAGGCGTCGGTGATCGGCTTTTCCATGGGTGGTCTGGTGGCGCGGGCGTTTGCCCTGCA TTACCCGGAACGCCTGAAAAGCCTGGTGGTGCTCAACAGCGTGTTCAACCGCAGCGCAGAGCAGCGCGCCGGGGTCATCG CCCGCACCGCGCAGGCCGCCGAGCACGGGCCGGACGCGAATGCCGAAGCGGCGCTGTCGCGTTGGTTCAGCCGTGAATAC CAGGCGGCCAACCCGGCGCAGATCGCTGCGATCCGCCAGACCCTGGCCGGCAATGATCCGCAGGGTTACCTGACCACCTA CGAACTGTTCGCCACCCAGGACATGTACCGCGCCGACGACCTGGGCAGCATCCAGGCGCCAACGCTGATCGCCACCGGCG AGCTGGACCCCGGATCGACCCCGGAAATGGCCGTGCAACTGGCCGCGCGCATTCCCGGTGCGAAGGTTGCCGTACTGCCC GAGCAACGGCATATGATGCCGGTAGAGTCGCCACGGCTGGTGAACCAGACGCTGCTGGAATTTCTCGACACCGCACACGC CCGACAAAACCATATAAAGGGGATCGTTGCATGA
Upstream 100 bases:
>100_bases GCCTGCACCCGCGCATCGGCAACCGCTACATCGATCTGGAAGAACTGGCCGCCGAAAAAGCCCAGTAATCACAATAAAAA AGGCATTGCAGGAGCGCTCC
Downstream 100 bases:
>100_bases CGCTCGCACGCTTCCAGATGTGCATCGGCGGAGAATGGGTCGACGCCCTCTCCGGCAAGACTTTCGAAAGCCTCAACCCG GCGCTGGCCGAACCCTGGGC
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MIRLTAELTPAGTSYLATGVGQPVVLIHGVGLNKEMWGGQIVGLATQYRVIAYDMLGHGASPRPASGTALLGYADQLLEL LDHLQLPEASVIGFSMGGLVARAFALHYPERLKSLVVLNSVFNRSAEQRAGVIARTAQAAEHGPDANAEAALSRWFSREY QAANPAQIAAIRQTLAGNDPQGYLTTYELFATQDMYRADDLGSIQAPTLIATGELDPGSTPEMAVQLAARIPGAKVAVLP EQRHMMPVESPRLVNQTLLEFLDTAHARQNHIKGIVA
Sequences:
>Translated_277_residues MIRLTAELTPAGTSYLATGVGQPVVLIHGVGLNKEMWGGQIVGLATQYRVIAYDMLGHGASPRPASGTALLGYADQLLEL LDHLQLPEASVIGFSMGGLVARAFALHYPERLKSLVVLNSVFNRSAEQRAGVIARTAQAAEHGPDANAEAALSRWFSREY QAANPAQIAAIRQTLAGNDPQGYLTTYELFATQDMYRADDLGSIQAPTLIATGELDPGSTPEMAVQLAARIPGAKVAVLP EQRHMMPVESPRLVNQTLLEFLDTAHARQNHIKGIVA >Mature_277_residues MIRLTAELTPAGTSYLATGVGQPVVLIHGVGLNKEMWGGQIVGLATQYRVIAYDMLGHGASPRPASGTALLGYADQLLEL LDHLQLPEASVIGFSMGGLVARAFALHYPERLKSLVVLNSVFNRSAEQRAGVIARTAQAAEHGPDANAEAALSRWFSREY QAANPAQIAAIRQTLAGNDPQGYLTTYELFATQDMYRADDLGSIQAPTLIATGELDPGSTPEMAVQLAARIPGAKVAVLP EQRHMMPVESPRLVNQTLLEFLDTAHARQNHIKGIVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27597073, Length=293, Percent_Identity=26.6211604095563, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17558492, Length=99, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI32566936, Length=99, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29656; Mature: 29656
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLTAELTPAGTSYLATGVGQPVVLIHGVGLNKEMWGGQIVGLATQYRVIAYDMLGHGA CEEEEEECCCCCCHHHHHCCCCCEEEEEECCCCCHHCCCEEEEEEHHHHHEEEHHHCCCC SPRPASGTALLGYADQLLELLDHLQLPEASVIGFSMGGLVARAFALHYPERLKSLVVLNS CCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHH VFNRSAEQRAGVIARTAQAAEHGPDANAEAALSRWFSREYQAANPAQIAAIRQTLAGNDP HHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC QGYLTTYELFATQDMYRADDLGSIQAPTLIATGELDPGSTPEMAVQLAARIPGAKVAVLP CCCEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECC EQRHMMPVESPRLVNQTLLEFLDTAHARQNHIKGIVA CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIRLTAELTPAGTSYLATGVGQPVVLIHGVGLNKEMWGGQIVGLATQYRVIAYDMLGHGA CEEEEEECCCCCCHHHHHCCCCCEEEEEECCCCCHHCCCEEEEEEHHHHHEEEHHHCCCC SPRPASGTALLGYADQLLELLDHLQLPEASVIGFSMGGLVARAFALHYPERLKSLVVLNS CCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHH VFNRSAEQRAGVIARTAQAAEHGPDANAEAALSRWFSREYQAANPAQIAAIRQTLAGNDP HHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC QGYLTTYELFATQDMYRADDLGSIQAPTLIATGELDPGSTPEMAVQLAARIPGAKVAVLP CCCEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECC EQRHMMPVESPRLVNQTLLEFLDTAHARQNHIKGIVA CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]