| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459379
Identifier: 77459379
GI number: 77459379
Start: 3626113
End: 3626463
Strand: Reverse
Name: 77459379
Synonym: Pfl01_3157
Alternate gene names: NA
Gene position: 3626463-3626113 (Counterclockwise)
Preceding gene: 77459380
Following gene: 77459375
Centisome position: 56.33
GC content: 63.82
Gene sequence:
>351_bases ATGAATCCGCTGTCGGTCGGCAATTCTCAAACTGAGCACCGGTTGCGGCTGAGCTGGCCGGATGGCCGCGAGCAGTTGCT TGACCATGCCGAACTGCGCCGCCAATGCCCGTGCTCGCAATGCCGGGCGTTTCGCCTGCGGGGCTCGCCGCCCATGGTTG ACCCGCGTGTGCGGGTCATCGAATTGAACGCTCAGGGCTACGGTCTGCAACTGGTGTTCAGCGACGGCCATCAGCGCGGG ATTTACCCGTGGGCCTATCTGGCGCAGCTGGAGGGGATCACTGTCCCGCCGTCATCGCTGGCCGACAGCCATGGAAAATA TCCAGCCCCGGCTGATACAGCGACGTCCTGA
Upstream 100 bases:
>100_bases AACTGAACGATCGCGGCGCCGTGGCCGCATTGCAGGCCGCGCAGGACGACGGCGATCCGGAAGTGCGCAAAGCCGTGCGG ATTGCCTTGAGTCAGCTGCA
Downstream 100 bases:
>100_bases CCTCGAACAACCCCAGCACCGAGTGGAACAGGTTGTCGTGGCTCAGATCCGGCTGGCTGCTTTTGCCTTGCAGGCAGCCA CGGTCGATGCCCAGTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNPLSVGNSQTEHRLRLSWPDGREQLLDHAELRRQCPCSQCRAFRLRGSPPMVDPRVRVIELNAQGYGLQLVFSDGHQRG IYPWAYLAQLEGITVPPSSLADSHGKYPAPADTATS
Sequences:
>Translated_116_residues MNPLSVGNSQTEHRLRLSWPDGREQLLDHAELRRQCPCSQCRAFRLRGSPPMVDPRVRVIELNAQGYGLQLVFSDGHQRG IYPWAYLAQLEGITVPPSSLADSHGKYPAPADTATS >Mature_116_residues MNPLSVGNSQTEHRLRLSWPDGREQLLDHAELRRQCPCSQCRAFRLRGSPPMVDPRVRVIELNAQGYGLQLVFSDGHQRG IYPWAYLAQLEGITVPPSSLADSHGKYPAPADTATS
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12910; Mature: 12910
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLSVGNSQTEHRLRLSWPDGREQLLDHAELRRQCPCSQCRAFRLRGSPPMVDPRVRVI CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCEEEE ELNAQGYGLQLVFSDGHQRGIYPWAYLAQLEGITVPPSSLADSHGKYPAPADTATS EECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNPLSVGNSQTEHRLRLSWPDGREQLLDHAELRRQCPCSQCRAFRLRGSPPMVDPRVRVI CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCEEEE ELNAQGYGLQLVFSDGHQRGIYPWAYLAQLEGITVPPSSLADSHGKYPAPADTATS EECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA