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The map label for this gene is ypgR [H]

Identifier: 77459380

GI number: 77459380

Start: 3626460

End: 3627422

Strand: Reverse

Name: ypgR [H]

Synonym: Pfl01_3158

Alternate gene names: 77459380

Gene position: 3627422-3626460 (Counterclockwise)

Preceding gene: 77459381

Following gene: 77459379

Centisome position: 56.34

GC content: 67.81

Gene sequence:

>963_bases
GTGACTTCATTTTTTGCTTTGACCGATAACGACGACATTCTCGCCCTGCAACCACGCCTGACCGCCGATGATGCCGGGGT
GCGGCGGATTGCCCTGATCGACCTGGCCGACCTCGAAGAGCCGGACGGTCTGCTCTGGCTGGTCGAACGACTGGCCGAAG
ACCCTGCCGAAGAGGTGCGTGCCGAAGCGGCGCGTTTATTGGAAGCCTGGGAAGACGAGCCGGTGGTTGAGGCGCTGTGC
CAGGCGCTGACGGATCCGTCGCCGGCGGTGCAAGCCGCTGCGGCGCAGAGCCTGAGCCTGCTCAAGACCGAAGCGGCGGG
CAGGGTGATTCTGCCGTGGACCGCCCATGCCGAAACCGGCGTGCGGATTGCCGCGTTCCGGGCCTTGCGCGAGTTGCGTT
TCCCCGGCGCTGCGCCGGCCGCGATTCAGGCGCTGAACGATGCCGATGCCAGTGTGCGCCGCGAAGCCGTCGGCGTGCTC
GGCTGGCTCAAGCAACTCGACGCGTTGCCGGCACTGGCCCGCCTGGCGAGTGATGACCCGGACACCGAAGTACGCCGCGC
CGCCACCGGCGCCCTGGGCCTGGCAAGTGACGCTGACGTGCTGCCTGCGTTGCGTCAGGCCTTGCAGGATCAGGCCTGGC
AAGTGCGCGAAGAAGCCGCGACCACCCTCGGCAAGGTCGGCCACACCGATGCGGGCCCGGCGCTGATCGAAGCCTTGGCC
GACGACTACTGGCAAGTGCGCCTGCGCGCTACCCGTAGTCTCGGGCGCCTCAAGTACGTCGCTGCCCTCGACGCCTTGAT
CGACACCCTCGGCCACCGCATCAGCAACCTGCGCAAGGAAGCCGCGCTGGCCCTCGGCGAACTGAACGATCGCGGCGCCG
TGGCCGCATTGCAGGCCGCGCAGGACGACGGCGATCCGGAAGTGCGCAAAGCCGTGCGGATTGCCTTGAGTCAGCTGCAA
TGA

Upstream 100 bases:

>100_bases
GCCACTGCCTCGACCTGCTGCGCCACGACAACGACCGACCGCTGCCGCGCCTCAATCCGCTCGGCCTGCCTCCTGAAAAC
TCTTTGCCGAGATTTGCCCT

Downstream 100 bases:

>100_bases
ATCCGCTGTCGGTCGGCAATTCTCAAACTGAGCACCGGTTGCGGCTGAGCTGGCCGGATGGCCGCGAGCAGTTGCTTGAC
CATGCCGAACTGCGCCGCCA

Product: phycobiliprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTSFFALTDNDDILALQPRLTADDAGVRRIALIDLADLEEPDGLLWLVERLAEDPAEEVRAEAARLLEAWEDEPVVEALC
QALTDPSPAVQAAAAQSLSLLKTEAAGRVILPWTAHAETGVRIAAFRALRELRFPGAAPAAIQALNDADASVRREAVGVL
GWLKQLDALPALARLASDDPDTEVRRAATGALGLASDADVLPALRQALQDQAWQVREEAATTLGKVGHTDAGPALIEALA
DDYWQVRLRATRSLGRLKYVAALDALIDTLGHRISNLRKEAALALGELNDRGAVAALQAAQDDGDPEVRKAVRIALSQLQ

Sequences:

>Translated_320_residues
MTSFFALTDNDDILALQPRLTADDAGVRRIALIDLADLEEPDGLLWLVERLAEDPAEEVRAEAARLLEAWEDEPVVEALC
QALTDPSPAVQAAAAQSLSLLKTEAAGRVILPWTAHAETGVRIAAFRALRELRFPGAAPAAIQALNDADASVRREAVGVL
GWLKQLDALPALARLASDDPDTEVRRAATGALGLASDADVLPALRQALQDQAWQVREEAATTLGKVGHTDAGPALIEALA
DDYWQVRLRATRSLGRLKYVAALDALIDTLGHRISNLRKEAALALGELNDRGAVAALQAAQDDGDPEVRKAVRIALSQLQ
>Mature_319_residues
TSFFALTDNDDILALQPRLTADDAGVRRIALIDLADLEEPDGLLWLVERLAEDPAEEVRAEAARLLEAWEDEPVVEALCQ
ALTDPSPAVQAAAAQSLSLLKTEAAGRVILPWTAHAETGVRIAAFRALRELRFPGAAPAAIQALNDADASVRREAVGVLG
WLKQLDALPALARLASDDPDTEVRRAATGALGLASDADVLPALRQALQDQAWQVREEAATTLGKVGHTDAGPALIEALAD
DYWQVRLRATRSLGRLKYVAALDALIDTLGHRISNLRKEAALALGELNDRGAVAALQAAQDDGDPEVRKAVRIALSQLQ

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR014824
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS; PF08712 Nfu_N [H]

EC number: NA

Molecular weight: Translated: 34205; Mature: 34074

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS50077 HEAT_REPEAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFFALTDNDDILALQPRLTADDAGVRRIALIDLADLEEPDGLLWLVERLAEDPAEEVR
CCCEEEEECCCCEEEECCCCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHHCHHHHHH
AEAARLLEAWEDEPVVEALCQALTDPSPAVQAAAAQSLSLLKTEAAGRVILPWTAHAETG
HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
VRIAAFRALRELRFPGAAPAAIQALNDADASVRREAVGVLGWLKQLDALPALARLASDDP
HHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTEVRRAATGALGLASDADVLPALRQALQDQAWQVREEAATTLGKVGHTDAGPALIEALA
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DDYWQVRLRATRSLGRLKYVAALDALIDTLGHRISNLRKEAALALGELNDRGAVAALQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QDDGDPEVRKAVRIALSQLQ
CCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSFFALTDNDDILALQPRLTADDAGVRRIALIDLADLEEPDGLLWLVERLAEDPAEEVR
CCEEEEECCCCEEEECCCCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHHCHHHHHH
AEAARLLEAWEDEPVVEALCQALTDPSPAVQAAAAQSLSLLKTEAAGRVILPWTAHAETG
HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
VRIAAFRALRELRFPGAAPAAIQALNDADASVRREAVGVLGWLKQLDALPALARLASDDP
HHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTEVRRAATGALGLASDADVLPALRQALQDQAWQVREEAATTLGKVGHTDAGPALIEALA
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
DDYWQVRLRATRSLGRLKYVAALDALIDTLGHRISNLRKEAALALGELNDRGAVAALQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QDDGDPEVRKAVRIALSQLQ
CCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]