| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is acsA1 [H]
Identifier: 77459302
GI number: 77459302
Start: 3524719
End: 3526674
Strand: Direct
Name: acsA1 [H]
Synonym: Pfl01_3080
Alternate gene names: 77459302
Gene position: 3524719-3526674 (Clockwise)
Preceding gene: 77459301
Following gene: 77459305
Centisome position: 54.75
GC content: 62.37
Gene sequence:
>1956_bases ATGTCCGACATTCTCTGGCAGCCCGATGCCAAACGCATTGCCCGGTCCCGCATGGACGGCTTTCGGCGCTTCATCAATCA GCGCCACCACCTGAAGCTCGACGACTACCCTGCGCTGCACCAATGGTCCATCGACCAGCGCGAAGCGTTCTGGCAAGCGA TCGTGGATTTCTTCGGCATCAGTTTTCACACCCAACCGGACGCCGTTCTGCGCGGAGGCCTGAAAATGCCGGGTGCCGAG TGGTTTCCCGGTGCCACCCTGAACTTCGCCGAGCATCTGCTTAGCCGACGCGACGATGCCATCGCCGTGATCGCTATCGG GGAAAACGGCCAGCGTGAACTGCTGACCTGGGCCGAGCTGGCCCAGCAAGTCGCCGGGTTCCAGGCCAGCCTGCAAGCGG CCGGCGTGTTGGTTGGCGACCGGATTGCGGCCTGCATGCCCAACACCTGGCAAACCCTGGTGGCGATGCTCGCGACCACC AGTCTCGGGGCAATCTGGTCATGCTCCTCGCCGGACTTCGGCACCCACGGCGTGATCGACCGCTTCGGCCAGATCGAACC GAAGGTGCTGATCACCTGCGCCGGCTACCGTTACGCTGGCAAGGAGATCGACCAGACCGTCAAGGTCAATGAAATCCTCG AACAGCTGCCGTCACTGCAACAGCTGATCATCGTGCCCTACGCGCGACCTCAAGCCCATGCCACGGATTACCGGACACCC GCCAACGTCACGCTGTGGGACGACTTCTACGAACCGGGCGATGAGCCGCAATTCGTCCCGGTGCCGTTCGATCATCCGCT GTACGTGCTTTATTCCAGCGGCACCACCGGCGTGCCGAAGTGCATCGTGCACAGCACCGGCGGCGTGCTGCTGCAACACG TCAAGGAGCACGGGCTGCATGTTGACCTCGGACCCGGCGACCGTTTGTTCTACTACACCACCTGCGGCTGGATGATGTGG AACTGGCTGGTCTCGGCACTGGCGGTCGGCAGCGCGGTGGTGCTGTATGACGGTTCACCGTTTTATCCGGACAACGAGCG CTTGCTGGAGCTGCTGGACGACGAACAGGTCAGCGTGTTCGGCACCAGCCCGAAATTCCTCGCGACCCTGGAAAGCAGCG GCATCAAACCGCGCGAAAGCTACGACCTGAGCCACCTGAGAACCCTGCTTTGCACCGGCTCCGCACTGTCACCGCAGAGT TATGACTTCGTCTATCGCGACTTCAAACCGGATGTGTGCTTGTCCTCGATGTCCGGCGGTACGGACATCGTGTCCTGCTT CGTCAACGGCAACCCGATGTCAGCAGTCCGCCGGGGCGAAATCATGGGCAAGAGCCTGGCCATGGCGGTGGAAGTGTGGA ACGACGCCGGGCAACCGGTCGTTGGCGAAAAAGGCGAACTGGTGTGTACCCGGTCATTTCCGGCGGTGCCTATCGGACTC TGGAACGATCCCGATGGCGAGAAACTGCGCAAATCCTATTTCAGCCAGTTCCCCGGCGTCTGGGCCCAGGGTGACTACGC CGAACAACTGCCCCACGGCGGGATGCTGATTCACGGCCGCTCCGACGCCGTGCTCAACCCCGGCGGCGTGCGCATCGGCA CGGCGGAAATCTACCGTCAGGTGGAGAAAGTCCCGCAAGTGCTGGACAGCGTCGCCATCGGCCAACAGTGGCAGGACGAT GTGCGCGTGGTGCTGTTCGTGCACCTCAAGGACGGCGTAACGCTGGATGACACGCTGCAACAGCAGATCCGCCAGGTGAT CCGTGCCAACACCACACCGCGCCATGTGCCGGCGAAGATCGTCGCGGTCACCGACATTCCGCGCACCATCAGCGGCAAAG TGGTGGAGCTGGCCGTGCGCAATGTGGTGCACGGTGAACCGGTGAAAAACACCGATGCGCTGGCCAATCCGCAAGCGCTC GAGCAGTTTCGCGATCGACCGGAATTGAACAGCTGA
Upstream 100 bases:
>100_bases CGCGTGGAATATCGATGGCGGGTGGCTCGCGCAGTAAGCGTGCAAATGATCGCTCCCACGCTGTCGTGGGAGCCTTCTGA CCAACAATAAGAGGCAAACC
Downstream 100 bases:
>100_bases CAACAGCGCTCCTGTGCCAGGAGCGCCGTTCTGTAATGCAGACGGATTATTCAGGTCGGTTCAGGGTCAGCACCACCGGG TCGGCAATCGCACCGGTGCG
Product: acetoacetyl-CoA synthetase
Products: NA
Alternate protein names: Acetoacetate--CoA ligase 1; Acyl-activating enzyme 1 [H]
Number of amino acids: Translated: 651; Mature: 650
Protein sequence:
>651_residues MSDILWQPDAKRIARSRMDGFRRFINQRHHLKLDDYPALHQWSIDQREAFWQAIVDFFGISFHTQPDAVLRGGLKMPGAE WFPGATLNFAEHLLSRRDDAIAVIAIGENGQRELLTWAELAQQVAGFQASLQAAGVLVGDRIAACMPNTWQTLVAMLATT SLGAIWSCSSPDFGTHGVIDRFGQIEPKVLITCAGYRYAGKEIDQTVKVNEILEQLPSLQQLIIVPYARPQAHATDYRTP ANVTLWDDFYEPGDEPQFVPVPFDHPLYVLYSSGTTGVPKCIVHSTGGVLLQHVKEHGLHVDLGPGDRLFYYTTCGWMMW NWLVSALAVGSAVVLYDGSPFYPDNERLLELLDDEQVSVFGTSPKFLATLESSGIKPRESYDLSHLRTLLCTGSALSPQS YDFVYRDFKPDVCLSSMSGGTDIVSCFVNGNPMSAVRRGEIMGKSLAMAVEVWNDAGQPVVGEKGELVCTRSFPAVPIGL WNDPDGEKLRKSYFSQFPGVWAQGDYAEQLPHGGMLIHGRSDAVLNPGGVRIGTAEIYRQVEKVPQVLDSVAIGQQWQDD VRVVLFVHLKDGVTLDDTLQQQIRQVIRANTTPRHVPAKIVAVTDIPRTISGKVVELAVRNVVHGEPVKNTDALANPQAL EQFRDRPELNS
Sequences:
>Translated_651_residues MSDILWQPDAKRIARSRMDGFRRFINQRHHLKLDDYPALHQWSIDQREAFWQAIVDFFGISFHTQPDAVLRGGLKMPGAE WFPGATLNFAEHLLSRRDDAIAVIAIGENGQRELLTWAELAQQVAGFQASLQAAGVLVGDRIAACMPNTWQTLVAMLATT SLGAIWSCSSPDFGTHGVIDRFGQIEPKVLITCAGYRYAGKEIDQTVKVNEILEQLPSLQQLIIVPYARPQAHATDYRTP ANVTLWDDFYEPGDEPQFVPVPFDHPLYVLYSSGTTGVPKCIVHSTGGVLLQHVKEHGLHVDLGPGDRLFYYTTCGWMMW NWLVSALAVGSAVVLYDGSPFYPDNERLLELLDDEQVSVFGTSPKFLATLESSGIKPRESYDLSHLRTLLCTGSALSPQS YDFVYRDFKPDVCLSSMSGGTDIVSCFVNGNPMSAVRRGEIMGKSLAMAVEVWNDAGQPVVGEKGELVCTRSFPAVPIGL WNDPDGEKLRKSYFSQFPGVWAQGDYAEQLPHGGMLIHGRSDAVLNPGGVRIGTAEIYRQVEKVPQVLDSVAIGQQWQDD VRVVLFVHLKDGVTLDDTLQQQIRQVIRANTTPRHVPAKIVAVTDIPRTISGKVVELAVRNVVHGEPVKNTDALANPQAL EQFRDRPELNS >Mature_650_residues SDILWQPDAKRIARSRMDGFRRFINQRHHLKLDDYPALHQWSIDQREAFWQAIVDFFGISFHTQPDAVLRGGLKMPGAEW FPGATLNFAEHLLSRRDDAIAVIAIGENGQRELLTWAELAQQVAGFQASLQAAGVLVGDRIAACMPNTWQTLVAMLATTS LGAIWSCSSPDFGTHGVIDRFGQIEPKVLITCAGYRYAGKEIDQTVKVNEILEQLPSLQQLIIVPYARPQAHATDYRTPA NVTLWDDFYEPGDEPQFVPVPFDHPLYVLYSSGTTGVPKCIVHSTGGVLLQHVKEHGLHVDLGPGDRLFYYTTCGWMMWN WLVSALAVGSAVVLYDGSPFYPDNERLLELLDDEQVSVFGTSPKFLATLESSGIKPRESYDLSHLRTLLCTGSALSPQSY DFVYRDFKPDVCLSSMSGGTDIVSCFVNGNPMSAVRRGEIMGKSLAMAVEVWNDAGQPVVGEKGELVCTRSFPAVPIGLW NDPDGEKLRKSYFSQFPGVWAQGDYAEQLPHGGMLIHGRSDAVLNPGGVRIGTAEIYRQVEKVPQVLDSVAIGQQWQDDV RVVLFVHLKDGVTLDDTLQQQIRQVIRANTTPRHVPAKIVAVTDIPRTISGKVVELAVRNVVHGEPVKNTDALANPQALE QFRDRPELNS
Specific function: Involved in poly-3-hydroxybutyrate degradation. Activates acetoacetate to acetoacetyl-CoA [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI31982927, Length=659, Percent_Identity=43.3990895295903, Blast_Score=569, Evalue=1e-162, Organism=Homo sapiens, GI28416953, Length=639, Percent_Identity=25.8215962441315, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI8923896, Length=659, Percent_Identity=24.7344461305008, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI253970489, Length=672, Percent_Identity=24.2559523809524, Blast_Score=170, Evalue=5e-42, Organism=Homo sapiens, GI13375727, Length=582, Percent_Identity=26.1168384879725, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI38505220, Length=533, Percent_Identity=23.827392120075, Blast_Score=101, Evalue=3e-21, Organism=Homo sapiens, GI157311624, Length=535, Percent_Identity=22.6168224299065, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI157311622, Length=535, Percent_Identity=22.6168224299065, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI58082049, Length=535, Percent_Identity=22.6168224299065, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI42544132, Length=535, Percent_Identity=21.3084112149533, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1790505, Length=640, Percent_Identity=25.625, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1786529, Length=657, Percent_Identity=24.3531202435312, Blast_Score=132, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17569507, Length=636, Percent_Identity=37.5786163522013, Blast_Score=450, Evalue=1e-126, Organism=Caenorhabditis elegans, GI71982997, Length=654, Percent_Identity=24.6177370030581, Blast_Score=140, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71983001, Length=654, Percent_Identity=24.6177370030581, Blast_Score=139, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323182, Length=649, Percent_Identity=25.57781201849, Blast_Score=190, Evalue=7e-49, Organism=Saccharomyces cerevisiae, GI6319264, Length=654, Percent_Identity=25.5351681957187, Blast_Score=182, Evalue=1e-46, Organism=Drosophila melanogaster, GI24667955, Length=660, Percent_Identity=25.4545454545455, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI62472339, Length=558, Percent_Identity=26.1648745519713, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24667959, Length=527, Percent_Identity=25.8064516129032, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI21355225, Length=579, Percent_Identity=25.2158894645941, Blast_Score=155, Evalue=7e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005914 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.16 [H]
Molecular weight: Translated: 72102; Mature: 71971
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDILWQPDAKRIARSRMDGFRRFINQRHHLKLDDYPALHQWSIDQREAFWQAIVDFFGI CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC SFHTQPDAVLRGGLKMPGAEWFPGATLNFAEHLLSRRDDAIAVIAIGENGQRELLTWAEL CCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH AQQVAGFQASLQAAGVLVGDRIAACMPNTWQTLVAMLATTSLGAIWSCSSPDFGTHGVID HHHHHHHHHHHHHCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHH RFGQIEPKVLITCAGYRYAGKEIDQTVKVNEILEQLPSLQQLIIVPYARPQAHATDYRTP HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC ANVTLWDDFYEPGDEPQFVPVPFDHPLYVLYSSGTTGVPKCIVHSTGGVLLQHVKEHGLH CCEEEEHHHCCCCCCCCEEECCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCCE VDLGPGDRLFYYTTCGWMMWNWLVSALAVGSAVVLYDGSPFYPDNERLLELLDDEQVSVF EEECCCCEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCEEEE GTSPKFLATLESSGIKPRESYDLSHLRTLLCTGSALSPQSYDFVYRDFKPDVCLSSMSGG ECCCHHEEEHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHCCCCC TDIVSCFVNGNPMSAVRRGEIMGKSLAMAVEVWNDAGQPVVGEKGELVCTRSFPAVPIGL CEEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCCEEEEC WNDPDGEKLRKSYFSQFPGVWAQGDYAEQLPHGGMLIHGRSDAVLNPGGVRIGTAEIYRQ CCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEECCCCCEECCCCCEECHHHHHHH VEKVPQVLDSVAIGQQWQDDVRVVLFVHLKDGVTLDDTLQQQIRQVIRANTTPRHVPAKI HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE VAVTDIPRTISGKVVELAVRNVVHGEPVKNTDALANPQALEQFRDRPELNS EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure SDILWQPDAKRIARSRMDGFRRFINQRHHLKLDDYPALHQWSIDQREAFWQAIVDFFGI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC SFHTQPDAVLRGGLKMPGAEWFPGATLNFAEHLLSRRDDAIAVIAIGENGQRELLTWAEL CCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH AQQVAGFQASLQAAGVLVGDRIAACMPNTWQTLVAMLATTSLGAIWSCSSPDFGTHGVID HHHHHHHHHHHHHCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHH RFGQIEPKVLITCAGYRYAGKEIDQTVKVNEILEQLPSLQQLIIVPYARPQAHATDYRTP HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC ANVTLWDDFYEPGDEPQFVPVPFDHPLYVLYSSGTTGVPKCIVHSTGGVLLQHVKEHGLH CCEEEEHHHCCCCCCCCEEECCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCCE VDLGPGDRLFYYTTCGWMMWNWLVSALAVGSAVVLYDGSPFYPDNERLLELLDDEQVSVF EEECCCCEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCEEEE GTSPKFLATLESSGIKPRESYDLSHLRTLLCTGSALSPQSYDFVYRDFKPDVCLSSMSGG ECCCHHEEEHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHCCCCC TDIVSCFVNGNPMSAVRRGEIMGKSLAMAVEVWNDAGQPVVGEKGELVCTRSFPAVPIGL CEEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEECCCCCEEEEC WNDPDGEKLRKSYFSQFPGVWAQGDYAEQLPHGGMLIHGRSDAVLNPGGVRIGTAEIYRQ CCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEECCCCCEECCCCCEECHHHHHHH VEKVPQVLDSVAIGQQWQDDVRVVLFVHLKDGVTLDDTLQQQIRQVIRANTTPRHVPAKI HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE VAVTDIPRTISGKVVELAVRNVVHGEPVKNTDALANPQALEQFRDRPELNS EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10735852; 11481430 [H]