| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is zraS [C]
Identifier: 77459305
GI number: 77459305
Start: 3531893
End: 3534430
Strand: Direct
Name: zraS [C]
Synonym: Pfl01_3083
Alternate gene names: 77459305
Gene position: 3531893-3534430 (Clockwise)
Preceding gene: 77459302
Following gene: 77459306
Centisome position: 54.86
GC content: 62.17
Gene sequence:
>2538_bases ATGAACGCTGTACCGAACACCAACGACGCCCAGACATTGATCGCCCGAACCGACTGGAGCCGCAGCCCGCTGGGCGCCGC CGGCACCTGGCCTCAGAGCCTGCGCACCGCGGTGGACATCGTGCTTCACTCGCCGATGCCGATGCTGCTGTTGTGGGGCC CGCAATTGACCCAGATCTACAACGACGGCTTCGCGCTGCTGGCCGGCAACAAGCATCCGCACGCTTTCGGACAACCAGCG CACCAGATATGGCCGGAACTTCGAGACTTTACCGACCCTATTTACAGCGCCGTCCTACAGGGCCAGGTGCGAACCTACAG CGAACGACGCTTCACCCTGCAACGGGACGGCCAGGAGTCCGACTTCTGGCTTGACCTGACCTACAGCCCGATCCGTGACG AAAGCGCGCAGGTGGCCGGAATTTTGGTCACCGCCATCGAAACCAACGAACGTCGGCGCATTGCCCTGGAACTGCAACAG CGCTCCGAAAACAGCCTCAAGGCCCAGCGCGAAAGCGAAGAGCGCCTGCAACTGGCGCTGGCAGCCACCGATGCGGTCGG CACCTGGGATTGGGACATCGGCGAAGACCGCTTCATTGCCGACGCGCATTTCGCCCAGTTGCACGGTGTCGATCCGGCGC TGGCCGGTCAGTTGCCGATCAGCGAGTATCTGCACGGCGTGCACCCCGAAGACCGCGCAATGATCGCCCGCAGTATCAAG CATTGCATTACCCACGGCACCGAATACGCCGAGGAATACCGCCTGCTGCAGGCCAACGGCGAACTGCGCTGGGTGTTCGC CCGCGGGCGTTGCTACAAGGATCATCATGGTCGGCCGACGCGCTTTCTCGGCGCTGCGCTGGATCTGACCGAACGCAAGC ACACCGAACAGGCATTGCGGCAAAGTCAGACCGAGCTGCAACTGATCATCAACGCCATGCCGATCCTGATCAGTTATGTC GACCACGAGGAACGCTTTCGCCTGAACAACGCCGCGTACCTCGACTGGTACGGGCTCACGCCGCAGGAGCTGTACGGTCG CACGATCCGCGAGGTGATCGGCGAAGAGGCCTATTTCCTGCGGGCACCTTACATCGCCGAAGCACTCGCCGGTCGCCCCT GCTCGTTCAGCCTGTACACGCCGCACCGCGACGGCAGCCAGCGGCATGCCTTGATGAATTACCTGCCGCGCCACGGTGCG GACGGTGCAGTGAACGGTTTCTACATCTTCGTGATCGACGAAACCGAACGCAAAAAGACCGAAGAAGCCCTGCGCAACCT CAATGAAACCCTTGAGGAGCGTGTGAGTGCGCGCACCGAACAACTGGCCCAGGCCAACCAGCGTTTGCAGAACGAAATGT TCGAACGCGAGCGCGCCGAAGACGCTCTGCGTCACGCACAGAAAATGGAAGCGGTCGGCCAGCTCACCGGCGGCATCGCC CACGACTTCAACAACATGCTGACCGGCATCATCGGCAGCCTCGACCTGATGCAACGCTACATCGCCAGTGGCCGCGCCGA TGAGATCGGCCGTTTCACCGACGCGGCGGTGTCTTCGGCCAACCGCGCGGCGGCATTGACCCACCGTCTGCTGGCGTTCT CCCGGCGTCAGTCGCTGGATCGCAAGACTATCGACGTCAATGAACTGATCCACTCGCTGGAAGACCTGATCCGCCGCACT AAAGGTGATCCGATCGAGCTCAAGTTGCGCCTGGCCGACAATGTATGGCCGGTCAGCACCGATGTCAGCCAACTGGAAAA CGCCCTGCTCAACCTGGTGATCAACGCCCGCGATGCCATGCCGGACGGCGGTGAACTACTGATCGAAACGGCCAACGTCT ACCTCGACGGCAACGACATCACTACCCTCGAACCGGTCAAGGCCGGTGATTACCTGATGCTGGCGGTGAGCGACAACGGC ACCGGCATGACGCCTTCAGTACGTTCCAAAGCGTTCGATCCGTTCTTTACGACCAAACCCATCGGGCAAGGCACCGGGCT CGGCTTGTCGATGATTTATGGCTTTGCCCAGCAATCGGGAGGGCACGTCAGCCTCGACAGCCTGCCGGGCCAGGGCACCT GCGTGCGCCTGTACTTGCCGCGTTTGTATGCACTGGAAGCGGAGCAGCCGGCAATCGAAGCGGTTGCCGAGGCTCCGGCT GTCGCCACTGGCGAAACCGTGGTGGTGGTCGAGGACGATCCGGCAGTGCGCATGCTGGTCATGGACCTGCTCAAGGAGCT GGGTTATCGCGCCCATGAGGCCGAAGACGCCAAGGGTGCCTTGCCGCTACTGGAATCCGACCTGCGGGTGGACTTGCTGG TGACCGACGTCGGCCTGCCGGGCATGAACGGCCGGCAAATGGCGGAGATCGCCCGCCAACATCGTCCGGGGCTCAAAGTG TTGTTCATGACCGGGTACGCGCAGAAAGCCGCCGAACGTCAGGGCTTCCTCGAGGACGGGATGGACATGGTCGCCAAGCC GTTTTCCATCGAACAACTGGCCGGCAAGATCCGCACGATGATCAGCCAAAACCCGTGA
Upstream 100 bases:
>100_bases TGGACTTAAGACCGTGCGTCGTGACGCGACGGGCCTTACAGCGTCTACCGCTCTAGCATAATAGACGCCGCCTCACCGAC CGACGCCCAGGATTGATGTG
Downstream 100 bases:
>100_bases CTTGAGGCATAATCCGCGCCCGCCGTCACCCCGCTACAGGTATTGCACGATGAAAGCCCAAGCCCGCCACATTCTGGTGA AAACCGCCGAAGAGGCTGAA
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 845; Mature: 845
Protein sequence:
>845_residues MNAVPNTNDAQTLIARTDWSRSPLGAAGTWPQSLRTAVDIVLHSPMPMLLLWGPQLTQIYNDGFALLAGNKHPHAFGQPA HQIWPELRDFTDPIYSAVLQGQVRTYSERRFTLQRDGQESDFWLDLTYSPIRDESAQVAGILVTAIETNERRRIALELQQ RSENSLKAQRESEERLQLALAATDAVGTWDWDIGEDRFIADAHFAQLHGVDPALAGQLPISEYLHGVHPEDRAMIARSIK HCITHGTEYAEEYRLLQANGELRWVFARGRCYKDHHGRPTRFLGAALDLTERKHTEQALRQSQTELQLIINAMPILISYV DHEERFRLNNAAYLDWYGLTPQELYGRTIREVIGEEAYFLRAPYIAEALAGRPCSFSLYTPHRDGSQRHALMNYLPRHGA DGAVNGFYIFVIDETERKKTEEALRNLNETLEERVSARTEQLAQANQRLQNEMFERERAEDALRHAQKMEAVGQLTGGIA HDFNNMLTGIIGSLDLMQRYIASGRADEIGRFTDAAVSSANRAAALTHRLLAFSRRQSLDRKTIDVNELIHSLEDLIRRT KGDPIELKLRLADNVWPVSTDVSQLENALLNLVINARDAMPDGGELLIETANVYLDGNDITTLEPVKAGDYLMLAVSDNG TGMTPSVRSKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGHVSLDSLPGQGTCVRLYLPRLYALEAEQPAIEAVAEAPA VATGETVVVVEDDPAVRMLVMDLLKELGYRAHEAEDAKGALPLLESDLRVDLLVTDVGLPGMNGRQMAEIARQHRPGLKV LFMTGYAQKAAERQGFLEDGMDMVAKPFSIEQLAGKIRTMISQNP
Sequences:
>Translated_845_residues MNAVPNTNDAQTLIARTDWSRSPLGAAGTWPQSLRTAVDIVLHSPMPMLLLWGPQLTQIYNDGFALLAGNKHPHAFGQPA HQIWPELRDFTDPIYSAVLQGQVRTYSERRFTLQRDGQESDFWLDLTYSPIRDESAQVAGILVTAIETNERRRIALELQQ RSENSLKAQRESEERLQLALAATDAVGTWDWDIGEDRFIADAHFAQLHGVDPALAGQLPISEYLHGVHPEDRAMIARSIK HCITHGTEYAEEYRLLQANGELRWVFARGRCYKDHHGRPTRFLGAALDLTERKHTEQALRQSQTELQLIINAMPILISYV DHEERFRLNNAAYLDWYGLTPQELYGRTIREVIGEEAYFLRAPYIAEALAGRPCSFSLYTPHRDGSQRHALMNYLPRHGA DGAVNGFYIFVIDETERKKTEEALRNLNETLEERVSARTEQLAQANQRLQNEMFERERAEDALRHAQKMEAVGQLTGGIA HDFNNMLTGIIGSLDLMQRYIASGRADEIGRFTDAAVSSANRAAALTHRLLAFSRRQSLDRKTIDVNELIHSLEDLIRRT KGDPIELKLRLADNVWPVSTDVSQLENALLNLVINARDAMPDGGELLIETANVYLDGNDITTLEPVKAGDYLMLAVSDNG TGMTPSVRSKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGHVSLDSLPGQGTCVRLYLPRLYALEAEQPAIEAVAEAPA VATGETVVVVEDDPAVRMLVMDLLKELGYRAHEAEDAKGALPLLESDLRVDLLVTDVGLPGMNGRQMAEIARQHRPGLKV LFMTGYAQKAAERQGFLEDGMDMVAKPFSIEQLAGKIRTMISQNP >Mature_845_residues MNAVPNTNDAQTLIARTDWSRSPLGAAGTWPQSLRTAVDIVLHSPMPMLLLWGPQLTQIYNDGFALLAGNKHPHAFGQPA HQIWPELRDFTDPIYSAVLQGQVRTYSERRFTLQRDGQESDFWLDLTYSPIRDESAQVAGILVTAIETNERRRIALELQQ RSENSLKAQRESEERLQLALAATDAVGTWDWDIGEDRFIADAHFAQLHGVDPALAGQLPISEYLHGVHPEDRAMIARSIK HCITHGTEYAEEYRLLQANGELRWVFARGRCYKDHHGRPTRFLGAALDLTERKHTEQALRQSQTELQLIINAMPILISYV DHEERFRLNNAAYLDWYGLTPQELYGRTIREVIGEEAYFLRAPYIAEALAGRPCSFSLYTPHRDGSQRHALMNYLPRHGA DGAVNGFYIFVIDETERKKTEEALRNLNETLEERVSARTEQLAQANQRLQNEMFERERAEDALRHAQKMEAVGQLTGGIA HDFNNMLTGIIGSLDLMQRYIASGRADEIGRFTDAAVSSANRAAALTHRLLAFSRRQSLDRKTIDVNELIHSLEDLIRRT KGDPIELKLRLADNVWPVSTDVSQLENALLNLVINARDAMPDGGELLIETANVYLDGNDITTLEPVKAGDYLMLAVSDNG TGMTPSVRSKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGHVSLDSLPGQGTCVRLYLPRLYALEAEQPAIEAVAEAPA VATGETVVVVEDDPAVRMLVMDLLKELGYRAHEAEDAKGALPLLESDLRVDLLVTDVGLPGMNGRQMAEIARQHRPGLKV LFMTGYAQKAAERQGFLEDGMDMVAKPFSIEQLAGKIRTMISQNP
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=27.5303643724696, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=28.1746031746032, Blast_Score=97, Evalue=5e-21, Organism=Escherichia coli, GI87081816, Length=420, Percent_Identity=24.5238095238095, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788713, Length=270, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790300, Length=281, Percent_Identity=28.1138790035587, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI48994928, Length=405, Percent_Identity=24.4444444444444, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788381, Length=340, Percent_Identity=20.8823529411765, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI145693157, Length=138, Percent_Identity=34.0579710144928, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 94289; Mature: 94289
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVPNTNDAQTLIARTDWSRSPLGAAGTWPQSLRTAVDIVLHSPMPMLLLWGPQLTQIY CCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHH NDGFALLAGNKHPHAFGQPAHQIWPELRDFTDPIYSAVLQGQVRTYSERRFTLQRDGQES CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC DFWLDLTYSPIRDESAQVAGILVTAIETNERRRIALELQQRSENSLKAQRESEERLQLAL CEEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHE AATDAVGTWDWDIGEDRFIADAHFAQLHGVDPALAGQLPISEYLHGVHPEDRAMIARSIK EECCCCCCCCCCCCCCCEEECHHHHHHCCCCHHHCCCCCHHHHHCCCCCCHHHHHHHHHH HCITHGTEYAEEYRLLQANGELRWVFARGRCYKDHHGRPTRFLGAALDLTERKHTEQALR HHHHCCHHHHHHHEEEECCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH QSQTELQLIINAMPILISYVDHEERFRLNNAAYLDWYGLTPQELYGRTIREVIGEEAYFL HHHHHHHHHHHHHHHHHHHCCCHHHEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCEEE RAPYIAEALAGRPCSFSLYTPHRDGSQRHALMNYLPRHGADGAVNGFYIFVIDETERKKT ECCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHH EEALRNLNETLEERVSARTEQLAQANQRLQNEMFERERAEDALRHAQKMEAVGQLTGGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH HDFNNMLTGIIGSLDLMQRYIASGRADEIGRFTDAAVSSANRAAALTHRLLAFSRRQSLD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC RKTIDVNELIHSLEDLIRRTKGDPIELKLRLADNVWPVSTDVSQLENALLNLVINARDAM CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC PDGGELLIETANVYLDGNDITTLEPVKAGDYLMLAVSDNGTGMTPSVRSKAFDPFFTTKP CCCCEEEEEEEEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCC IGQGTGLGLSMIYGFAQQSGGHVSLDSLPGQGTCVRLYLPRLYALEAEQPAIEAVAEAPA CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECHHHEECCCCHHHHHHHHCCC VATGETVVVVEDDPAVRMLVMDLLKELGYRAHEAEDAKGALPLLESDLRVDLLVTDVGLP EECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCEEEEEEEECCCC GMNGRQMAEIARQHRPGLKVLFMTGYAQKAAERQGFLEDGMDMVAKPFSIEQLAGKIRTM CCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCHHHCCHHHHCCCCCHHHHHHHHHHH ISQNP HCCCC >Mature Secondary Structure MNAVPNTNDAQTLIARTDWSRSPLGAAGTWPQSLRTAVDIVLHSPMPMLLLWGPQLTQIY CCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHH NDGFALLAGNKHPHAFGQPAHQIWPELRDFTDPIYSAVLQGQVRTYSERRFTLQRDGQES CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC DFWLDLTYSPIRDESAQVAGILVTAIETNERRRIALELQQRSENSLKAQRESEERLQLAL CEEEEEECCCCCCCCCCEEEEEEEEEECCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHE AATDAVGTWDWDIGEDRFIADAHFAQLHGVDPALAGQLPISEYLHGVHPEDRAMIARSIK EECCCCCCCCCCCCCCCEEECHHHHHHCCCCHHHCCCCCHHHHHCCCCCCHHHHHHHHHH HCITHGTEYAEEYRLLQANGELRWVFARGRCYKDHHGRPTRFLGAALDLTERKHTEQALR HHHHCCHHHHHHHEEEECCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHH QSQTELQLIINAMPILISYVDHEERFRLNNAAYLDWYGLTPQELYGRTIREVIGEEAYFL HHHHHHHHHHHHHHHHHHHCCCHHHEEECCCEEEEEECCCHHHHHHHHHHHHHCCCCEEE RAPYIAEALAGRPCSFSLYTPHRDGSQRHALMNYLPRHGADGAVNGFYIFVIDETERKKT ECCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHH EEALRNLNETLEERVSARTEQLAQANQRLQNEMFERERAEDALRHAQKMEAVGQLTGGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH HDFNNMLTGIIGSLDLMQRYIASGRADEIGRFTDAAVSSANRAAALTHRLLAFSRRQSLD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC RKTIDVNELIHSLEDLIRRTKGDPIELKLRLADNVWPVSTDVSQLENALLNLVINARDAM CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC PDGGELLIETANVYLDGNDITTLEPVKAGDYLMLAVSDNGTGMTPSVRSKAFDPFFTTKP CCCCEEEEEEEEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCCC IGQGTGLGLSMIYGFAQQSGGHVSLDSLPGQGTCVRLYLPRLYALEAEQPAIEAVAEAPA CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECHHHEECCCCHHHHHHHHCCC VATGETVVVVEDDPAVRMLVMDLLKELGYRAHEAEDAKGALPLLESDLRVDLLVTDVGLP EECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCEEEEEEEECCCC GMNGRQMAEIARQHRPGLKVLFMTGYAQKAAERQGFLEDGMDMVAKPFSIEQLAGKIRTM CCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCHHHCCHHHHCCCCCHHHHHHHHHHH ISQNP HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA