| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459200
Identifier: 77459200
GI number: 77459200
Start: 3413300
End: 3414850
Strand: Reverse
Name: 77459200
Synonym: Pfl01_2975
Alternate gene names: NA
Gene position: 3414850-3413300 (Counterclockwise)
Preceding gene: 77459201
Following gene: 77459199
Centisome position: 53.04
GC content: 57.06
Gene sequence:
>1551_bases ATGAAACCACTCCGTCGCCTTGCGTTCATCTCATGTAGTACGGTGTTGGCGCTCGCTATCGCCCCGTTTGCGGCAGCACA ACAAAAAGGGGAGCAGGTTTTAAATACCATGTGCGCCGGTTGTCACATTGCTGCCGATGGTAGTTTCGAGCGTATAGACG CCGTGCGTAAAACCCCGGAGGCCTGGGATATGACGGTCGTTCGGATGATGCGCAACCATCATGTTCCGCTGAGCCAGGAT GACCGCACTGCGGTCGTGAGATACCTGGCCCAGACACGCGGGCTGAGCGTGAAGGAAACCGAGGGGCGTCGCTACGTCTT GGAAAAGGAGCCCGTCGCAACAGACGTGGCTCCTAACCAAATGATGACCGAGACCTGCTCCAGATGTCACTCCTATGCGC GGATCGCCTTGCAACGTCGAACCCCTGCTGACTGGGAGAAGTTGCTCAACTTCCATTTGGGGCAATTCCCGACGCTGGAG CTTCAAGCCATGGCGCGTGATCGGGATTGGTGGACATATGTGAACAGCGAAGTCCTGCCATTCCTGGCAAAAAACTACCC ACTGGGTCAGGCACCCAAAGCAGCCAATGCCAAATTGAGCGAGCGTTGGGTCGTGACCGGTCATCAGCCTGGAAGCGGCG ACTATTCGGGTACGTTGTCATTGAAGTCCGGGGAGGAGGGCTACGATGTTTCAATGACCCTCGAAAACAAAGCAGGCTCT GCGACGTATCAAGGCCGGGGAGTGTTGCTGGGCGAGGGTGAGTGGCGCGCGACGTTAAGCGACGGCAAGCAGGAAATCCG GCAAGTGTTTGCTCTGAATGCAGACGGATCACTGACAGGTCGCTGGTTCGAAAAATCCAATGAGGTCATTGGCGGACGCT TCATAGCTTCACCTGTCGATGCCTCGCCTCGGATTCTCGCTGTCAGTCCGACATACCTCAGAACCGGGACAGAAAGTGAG ATCACGCTCGTGGGGGTGGGTCTGTCGGGTAAGCCGGTTCTACCGAAAGGCGTTACCGGGACCGTTGTTTCTCAGAGCGA TACCAAAGTCGTGATGAAGCTTTCCTCGGAAAAGCCTTGGGGGGCTGTGAAAGTCAGTGTGGGCCAGGCGAGTGCGCCTC TGGTGGTTTTTTCCAAGCTTGACGGTGTACGCGTTGAGCCTGAACAAACTATCGCTCGGGTGGGCGGCAATGGTGGACCC ATCGCAAAGGTTCCCGCGCAGTTTGAGGCAATAGGCTTGCTCAAAGGAGCCGACCGAAAACTGGGAACCGCTGACGACGT CCGTGTGGGGACATTTGATGCTTCGTGGGCGGTGGACAACTGGGACGAAGGGGCTGCGAAGATGCAGGACACCAAGTACG CCGGTTCCATCGAACAGAACGGCCGCTTCACTCCAGCGGACGCGGGCCTGAATCCTGAGCGGCCGATGTCTACCAACAAC CTTGGCAATCTCAAGGTGATCGCCACCGTTGATGACAACGGCAAATCTCTCCCGGGCGAGGCGCATCTCTATGTCACCGT CCAGCGTTTCGTCGATACTCCTATTCGTTGA
Upstream 100 bases:
>100_bases GGGTTTTGGAGTGCGATAAAACAAAAATTAAAGACAATATTATAAAAAAATCGCCAGCATGGGCTTTGTCCCTTGTGAAG AGCCAAAGGAATTCTGATCG
Downstream 100 bases:
>100_bases GGCTCCCATGACAGCGCTTACCCTTATTCGGCATAACGCGCATCAAATAGATGTAGATGGTCATGCCATGATGATGCACG TCCCCAGCAGCAGTCTTTTT
Product: quinohemoprotein amine dehydrogenase, 60 kDa subunit
Products: NA
Alternate protein names: Quinohemoprotein Amine Dehydrogenase Alpha Subunit; Quinohemoprotein Amine Dehydrogenase Subunit Alpha
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MKPLRRLAFISCSTVLALAIAPFAAAQQKGEQVLNTMCAGCHIAADGSFERIDAVRKTPEAWDMTVVRMMRNHHVPLSQD DRTAVVRYLAQTRGLSVKETEGRRYVLEKEPVATDVAPNQMMTETCSRCHSYARIALQRRTPADWEKLLNFHLGQFPTLE LQAMARDRDWWTYVNSEVLPFLAKNYPLGQAPKAANAKLSERWVVTGHQPGSGDYSGTLSLKSGEEGYDVSMTLENKAGS ATYQGRGVLLGEGEWRATLSDGKQEIRQVFALNADGSLTGRWFEKSNEVIGGRFIASPVDASPRILAVSPTYLRTGTESE ITLVGVGLSGKPVLPKGVTGTVVSQSDTKVVMKLSSEKPWGAVKVSVGQASAPLVVFSKLDGVRVEPEQTIARVGGNGGP IAKVPAQFEAIGLLKGADRKLGTADDVRVGTFDASWAVDNWDEGAAKMQDTKYAGSIEQNGRFTPADAGLNPERPMSTNN LGNLKVIATVDDNGKSLPGEAHLYVTVQRFVDTPIR
Sequences:
>Translated_516_residues MKPLRRLAFISCSTVLALAIAPFAAAQQKGEQVLNTMCAGCHIAADGSFERIDAVRKTPEAWDMTVVRMMRNHHVPLSQD DRTAVVRYLAQTRGLSVKETEGRRYVLEKEPVATDVAPNQMMTETCSRCHSYARIALQRRTPADWEKLLNFHLGQFPTLE LQAMARDRDWWTYVNSEVLPFLAKNYPLGQAPKAANAKLSERWVVTGHQPGSGDYSGTLSLKSGEEGYDVSMTLENKAGS ATYQGRGVLLGEGEWRATLSDGKQEIRQVFALNADGSLTGRWFEKSNEVIGGRFIASPVDASPRILAVSPTYLRTGTESE ITLVGVGLSGKPVLPKGVTGTVVSQSDTKVVMKLSSEKPWGAVKVSVGQASAPLVVFSKLDGVRVEPEQTIARVGGNGGP IAKVPAQFEAIGLLKGADRKLGTADDVRVGTFDASWAVDNWDEGAAKMQDTKYAGSIEQNGRFTPADAGLNPERPMSTNN LGNLKVIATVDDNGKSLPGEAHLYVTVQRFVDTPIR >Mature_516_residues MKPLRRLAFISCSTVLALAIAPFAAAQQKGEQVLNTMCAGCHIAADGSFERIDAVRKTPEAWDMTVVRMMRNHHVPLSQD DRTAVVRYLAQTRGLSVKETEGRRYVLEKEPVATDVAPNQMMTETCSRCHSYARIALQRRTPADWEKLLNFHLGQFPTLE LQAMARDRDWWTYVNSEVLPFLAKNYPLGQAPKAANAKLSERWVVTGHQPGSGDYSGTLSLKSGEEGYDVSMTLENKAGS ATYQGRGVLLGEGEWRATLSDGKQEIRQVFALNADGSLTGRWFEKSNEVIGGRFIASPVDASPRILAVSPTYLRTGTESE ITLVGVGLSGKPVLPKGVTGTVVSQSDTKVVMKLSSEKPWGAVKVSVGQASAPLVVFSKLDGVRVEPEQTIARVGGNGGP IAKVPAQFEAIGLLKGADRKLGTADDVRVGTFDASWAVDNWDEGAAKMQDTKYAGSIEQNGRFTPADAGLNPERPMSTNN LGNLKVIATVDDNGKSLPGEAHLYVTVQRFVDTPIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55961; Mature: 55961
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLRRLAFISCSTVLALAIAPFAAAQQKGEQVLNTMCAGCHIAADGSFERIDAVRKTPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCC AWDMTVVRMMRNHHVPLSQDDRTAVVRYLAQTRGLSVKETEGRRYVLEKEPVATDVAPNQ HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCHH MMTETCSRCHSYARIALQRRTPADWEKLLNFHLGQFPTLELQAMARDRDWWTYVNSEVLP HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCEEHHHHHCCCCCEEECCCCHHH FLAKNYPLGQAPKAANAKLSERWVVTGHQPGSGDYSGTLSLKSGEEGYDVSMTLENKAGS HHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCC ATYQGRGVLLGEGEWRATLSDGKQEIRQVFALNADGSLTGRWFEKSNEVIGGRFIASPVD CEECCCEEEEECCCEEEEHHHHHHHHHHHHEECCCCCCEEHEECCCCCEECCEEEECCCC ASPRILAVSPTYLRTGTESEITLVGVGLSGKPVLPKGVTGTVVSQSDTKVVMKLSSEKPW CCCEEEEECCHHEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCC GAVKVSVGQASAPLVVFSKLDGVRVEPEQTIARVGGNGGPIAKVPAQFEAIGLLKGADRK CEEEEEECCCCCCEEEEECCCCCEECHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCC LGTADDVRVGTFDASWAVDNWDEGAAKMQDTKYAGSIEQNGRFTPADAGLNPERPMSTNN CCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LGNLKVIATVDDNGKSLPGEAHLYVTVQRFVDTPIR CCCEEEEEEECCCCCCCCCCEEEEEEEEHHHCCCCC >Mature Secondary Structure MKPLRRLAFISCSTVLALAIAPFAAAQQKGEQVLNTMCAGCHIAADGSFERIDAVRKTPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCC AWDMTVVRMMRNHHVPLSQDDRTAVVRYLAQTRGLSVKETEGRRYVLEKEPVATDVAPNQ HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCHH MMTETCSRCHSYARIALQRRTPADWEKLLNFHLGQFPTLELQAMARDRDWWTYVNSEVLP HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCEEHHHHHCCCCCEEECCCCHHH FLAKNYPLGQAPKAANAKLSERWVVTGHQPGSGDYSGTLSLKSGEEGYDVSMTLENKAGS HHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCC ATYQGRGVLLGEGEWRATLSDGKQEIRQVFALNADGSLTGRWFEKSNEVIGGRFIASPVD CEECCCEEEEECCCEEEEHHHHHHHHHHHHEECCCCCCEEHEECCCCCEECCEEEECCCC ASPRILAVSPTYLRTGTESEITLVGVGLSGKPVLPKGVTGTVVSQSDTKVVMKLSSEKPW CCCEEEEECCHHEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCC GAVKVSVGQASAPLVVFSKLDGVRVEPEQTIARVGGNGGPIAKVPAQFEAIGLLKGADRK CEEEEEECCCCCCEEEEECCCCCEECHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCC LGTADDVRVGTFDASWAVDNWDEGAAKMQDTKYAGSIEQNGRFTPADAGLNPERPMSTNN CCCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LGNLKVIATVDDNGKSLPGEAHLYVTVQRFVDTPIR CCCEEEEEEECCCCCCCCCCEEEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA