| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ada [H]
Identifier: 77459163
GI number: 77459163
Start: 3379813
End: 3380886
Strand: Direct
Name: ada [H]
Synonym: Pfl01_2938
Alternate gene names: 77459163
Gene position: 3379813-3380886 (Clockwise)
Preceding gene: 77459162
Following gene: 77459165
Centisome position: 52.49
GC content: 65.08
Gene sequence:
>1074_bases ATGAAAACGCTTTCAACCTCGCTGAGCACTGAAGACGATCCACGCTGGGCGGCTGTCGTGGCACGCGACCCTCGGGCGGA CGGCCAGTTTGTCTATGCCGTGAAAACCACCGGCATCTATTGCCGCCCCAGCAGTCTGGCGCGCTTGCCGAAACCGCAGA ACGTCGAGTTCTTCGATACCGCCGAGGACGCCGAAGCCGCGGGCTATCGCCCCAGCAAACGGGCGAGCAAGGATCAGACC GAAGTCGCAGCGCAGCACGCCGCTACCGTTGCGGCAGCCTGTCGCCAGATCGAAGCGTCGGACAGCCTGCCGGCGCTCAA CGATCTCGCCGAGACCGCCGGCCTGAGCGCCTTCCATTTTCACCGGGTCTTCAAAGCCGCAACGGGCCTGACGCCCAAAG GCTATGCCGCCGCGCATCGCTCGCGTCGGGTTCGCCAGCGTCTGGCGGACGGTAGCTCAGTGACGGAGGCGCTGTATGAC GCCGGTTTCAATTCCAACAGCCGGTTCTACGAGGCGGCCGATCAGGTGCTGGGCATGAAACCCGGCGACTTCCGATCCGC CGGGCAGAACAACGACATCCGCTTCGCCGTCGGCCAGTGCTCGCTCGGCGCCATTCTGGTGGCGCAGAGCGAGCGCGGGA TCTGCGCGATTCTGCTGGGGGACGATCCGCACCAATTGGTGTGCGACCTGCAGGACCAGTTTCGCCGGGCCAACCTGATC GGCGCCGACACCGAGTTCGAACAACTGATCGCGCGCGTCGTCGGCTTCATCGAAGCGCCTGCCATCGGCCTGGATTTGCC GCTGGATGTGCGCGGCACGGCGTTTCAGGAACGGGTGTGGCAGGCACTGCGCGAAATACCGGTCGGCAGCACCGCCAGCT ATGCGGACATCGCCTTGCGTATCGGCTCACCAAAAGCCGTACGCGCAGTGGCCCAGGCTTGCGGCGCCAACAGCCTGGCG GTAGCGATCCCCTGTCATCGCGTTGTGCGCAGTGACGGCAATCTGTCGGGCTACCGCTGGGGCGTGGAGCGCAAGCGCGA ATTGCTCGAGCGTGAAGGCAAACCACGGCAGTAA
Upstream 100 bases:
>100_bases ACCGCTGGATAATCCTGCAAAGTTTGACCGCAAGGGTCGGAGTGTTCCGGCCGGTGGCACTGGTTAACCTGACATTCAAC AGGTCAACGGACTCTCCATC
Downstream 100 bases:
>100_bases TCAGCGATTCACATCAACTACAACTCGCCCCCGGAGTTGCCCCGCCAGCAACTTCGGGGCCGCTTCGAGGGCTTCGCCGA GGCCGATTTCATGGCTGATC
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKTLSTSLSTEDDPRWAAVVARDPRADGQFVYAVKTTGIYCRPSSLARLPKPQNVEFFDTAEDAEAAGYRPSKRASKDQT EVAAQHAATVAAACRQIEASDSLPALNDLAETAGLSAFHFHRVFKAATGLTPKGYAAAHRSRRVRQRLADGSSVTEALYD AGFNSNSRFYEAADQVLGMKPGDFRSAGQNNDIRFAVGQCSLGAILVAQSERGICAILLGDDPHQLVCDLQDQFRRANLI GADTEFEQLIARVVGFIEAPAIGLDLPLDVRGTAFQERVWQALREIPVGSTASYADIALRIGSPKAVRAVAQACGANSLA VAIPCHRVVRSDGNLSGYRWGVERKRELLEREGKPRQ
Sequences:
>Translated_357_residues MKTLSTSLSTEDDPRWAAVVARDPRADGQFVYAVKTTGIYCRPSSLARLPKPQNVEFFDTAEDAEAAGYRPSKRASKDQT EVAAQHAATVAAACRQIEASDSLPALNDLAETAGLSAFHFHRVFKAATGLTPKGYAAAHRSRRVRQRLADGSSVTEALYD AGFNSNSRFYEAADQVLGMKPGDFRSAGQNNDIRFAVGQCSLGAILVAQSERGICAILLGDDPHQLVCDLQDQFRRANLI GADTEFEQLIARVVGFIEAPAIGLDLPLDVRGTAFQERVWQALREIPVGSTASYADIALRIGSPKAVRAVAQACGANSLA VAIPCHRVVRSDGNLSGYRWGVERKRELLEREGKPRQ >Mature_357_residues MKTLSTSLSTEDDPRWAAVVARDPRADGQFVYAVKTTGIYCRPSSLARLPKPQNVEFFDTAEDAEAAGYRPSKRASKDQT EVAAQHAATVAAACRQIEASDSLPALNDLAETAGLSAFHFHRVFKAATGLTPKGYAAAHRSRRVRQRLADGSSVTEALYD AGFNSNSRFYEAADQVLGMKPGDFRSAGQNNDIRFAVGQCSLGAILVAQSERGICAILLGDDPHQLVCDLQDQFRRANLI GADTEFEQLIARVVGFIEAPAIGLDLPLDVRGTAFQERVWQALREIPVGSTASYADIALRIGSPKAVRAVAQACGANSLA VAIPCHRVVRSDGNLSGYRWGVERKRELLEREGKPRQ
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788542, Length=343, Percent_Identity=51.8950437317784, Blast_Score=361, Evalue=1e-101, Organism=Escherichia coli, GI1787596, Length=88, Percent_Identity=45.4545454545455, Blast_Score=89, Evalue=5e-19, Organism=Caenorhabditis elegans, GI115533070, Length=81, Percent_Identity=60.4938271604938, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI115533068, Length=81, Percent_Identity=60.4938271604938, Blast_Score=107, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6320001, Length=81, Percent_Identity=48.1481481481481, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI17137554, Length=87, Percent_Identity=48.2758620689655, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 38645; Mature: 38645
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSTSLSTEDDPRWAAVVARDPRADGQFVYAVKTTGIYCRPSSLARLPKPQNVEFFDT CCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEECCHHHHCCCCCCCCEEEEC AEDAEAAGYRPSKRASKDQTEVAAQHAATVAAACRQIEASDSLPALNDLAETAGLSAFHF CCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH HRVFKAATGLTPKGYAAAHRSRRVRQRLADGSSVTEALYDAGFNSNSRFYEAADQVLGMK HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC PGDFRSAGQNNDIRFAVGQCSLGAILVAQSERGICAILLGDDPHQLVCDLQDQFRRANLI CCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHC GADTEFEQLIARVVGFIEAPAIGLDLPLDVRGTAFQERVWQALREIPVGSTASYADIALR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE IGSPKAVRAVAQACGANSLAVAIPCHRVVRSDGNLSGYRWGVERKRELLEREGKPRQ CCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTLSTSLSTEDDPRWAAVVARDPRADGQFVYAVKTTGIYCRPSSLARLPKPQNVEFFDT CCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCEEECCHHHHCCCCCCCCEEEEC AEDAEAAGYRPSKRASKDQTEVAAQHAATVAAACRQIEASDSLPALNDLAETAGLSAFHF CCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH HRVFKAATGLTPKGYAAAHRSRRVRQRLADGSSVTEALYDAGFNSNSRFYEAADQVLGMK HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC PGDFRSAGQNNDIRFAVGQCSLGAILVAQSERGICAILLGDDPHQLVCDLQDQFRRANLI CCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHC GADTEFEQLIARVVGFIEAPAIGLDLPLDVRGTAFQERVWQALREIPVGSTASYADIALR CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEE IGSPKAVRAVAQACGANSLAVAIPCHRVVRSDGNLSGYRWGVERKRELLEREGKPRQ CCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]