| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459165
Identifier: 77459165
GI number: 77459165
Start: 3382085
End: 3383146
Strand: Direct
Name: 77459165
Synonym: Pfl01_2940
Alternate gene names: NA
Gene position: 3382085-3383146 (Clockwise)
Preceding gene: 77459163
Following gene: 77459166
Centisome position: 52.53
GC content: 62.81
Gene sequence:
>1062_bases ATGAGCCAATGGCCTGATACCCGCATTCTTGACCTGTTCGGCATCGAACTGCCGATCATCCAGGGCCCCATGGCAGGTGC CACCAACTCATCCATGGTCATTGCAGCGTGCAACGCCGGTGGCCTCGGTTCGATGCCGGCCGCGATGCTGACCATCGAGC AACTGCGCGAAGAACTGAAGACCATTCGCCAGGGCACGAACAAGCCGTTCAACGTCAACTTCTTCTGCCATCAGCCGCCG GCCGCCGATGAGCAAAAGGCGCGTGACTGGAAAAACCTGCTGGAACCCTACTATCGCGAACTGGGCGTGGATTTCGATGC ACCGACGCCGGTGTCCAACCGCGCGCCGTTCGATACGGCTGCCTGCGAAGTGCTGGAAGAATTTCGCCCTGAAGTGGTGA GCTTCCACTTCGGCCTGCCGGAAAAAACCTTGCTGGATCGGGTCAAGGCCACCGGTGCGAAGATCATCTCGTCGGCAACC ACCGTCGACGAAGCGATCTGGCTGGAGCAGAACGGCTGCGACGCGATCATCGCCATGGGTTACGAGGCCGGCGGCCATCG CGGGATGTTTCTCAGCGACGACCTGAGCAGCCAGGTCGGTACGTTTGCCTTGGTGCCGCAAGTGGTCGACGCCGTGAGTG TGCCGGTGATTGCCGCCGGTGCGATTGCCGATGCGCGCGGCGTGGCGGCAGCGTTCCTGCTCGGTGCTTCGGCGGTTCAG GTCGGCACGGCGTATCTGTTTACTCCGGAAGCGAAAGTCAGTGCGTCGCACCACAAGGCCTTGCGCACCGCCAAGGAAAG CGAAACGGCGGTGACCAATCTGTTTACCGGGCGCCCGGCGCGGGGGATTCTCAATCGAGTGATGCGCGAGCTGGGCCCGA TGTCGGACAAGGCTCCTGCCTTTCCGCTGGCGGGTGGGGCCTTGATGCCGCTGCGCGCGAAGGGCGAAGCCGAATTCAGC AACCTCTGGGCCGGCCAGGCTTTCACGCTCGGCAAAGACCTCGGCACCGCCGAATTGACCCGGCAACTGGCTGAAGGCGC TCTGGCAAAACTGACCCGGTGA
Upstream 100 bases:
>100_bases TGTTCAAGCTACAAATCTGTGCTGGTCATGGGGTTGGCTTTGCGTTAAAAAACCGGCTGCTACCGTCCCTGCCCTGTTTT GTCGTCGGAGAAGCTATTCC
Downstream 100 bases:
>100_bases TGAACCTGAACGGGTGAGGAGCGTGGCGCCCTCGCCCGGTTTTAATCCAGTGCTTCCCGTTTGACGGCATTTCGCTATAT ATTTCGATATATAGCGTTTC
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSQWPDTRILDLFGIELPIIQGPMAGATNSSMVIAACNAGGLGSMPAAMLTIEQLREELKTIRQGTNKPFNVNFFCHQPP AADEQKARDWKNLLEPYYRELGVDFDAPTPVSNRAPFDTAACEVLEEFRPEVVSFHFGLPEKTLLDRVKATGAKIISSAT TVDEAIWLEQNGCDAIIAMGYEAGGHRGMFLSDDLSSQVGTFALVPQVVDAVSVPVIAAGAIADARGVAAAFLLGASAVQ VGTAYLFTPEAKVSASHHKALRTAKESETAVTNLFTGRPARGILNRVMRELGPMSDKAPAFPLAGGALMPLRAKGEAEFS NLWAGQAFTLGKDLGTAELTRQLAEGALAKLTR
Sequences:
>Translated_353_residues MSQWPDTRILDLFGIELPIIQGPMAGATNSSMVIAACNAGGLGSMPAAMLTIEQLREELKTIRQGTNKPFNVNFFCHQPP AADEQKARDWKNLLEPYYRELGVDFDAPTPVSNRAPFDTAACEVLEEFRPEVVSFHFGLPEKTLLDRVKATGAKIISSAT TVDEAIWLEQNGCDAIIAMGYEAGGHRGMFLSDDLSSQVGTFALVPQVVDAVSVPVIAAGAIADARGVAAAFLLGASAVQ VGTAYLFTPEAKVSASHHKALRTAKESETAVTNLFTGRPARGILNRVMRELGPMSDKAPAFPLAGGALMPLRAKGEAEFS NLWAGQAFTLGKDLGTAELTRQLAEGALAKLTR >Mature_352_residues SQWPDTRILDLFGIELPIIQGPMAGATNSSMVIAACNAGGLGSMPAAMLTIEQLREELKTIRQGTNKPFNVNFFCHQPPA ADEQKARDWKNLLEPYYRELGVDFDAPTPVSNRAPFDTAACEVLEEFRPEVVSFHFGLPEKTLLDRVKATGAKIISSATT VDEAIWLEQNGCDAIIAMGYEAGGHRGMFLSDDLSSQVGTFALVPQVVDAVSVPVIAAGAIADARGVAAAFLLGASAVQV GTAYLFTPEAKVSASHHKALRTAKESETAVTNLFTGRPARGILNRVMRELGPMSDKAPAFPLAGGALMPLRAKGEAEFSN LWAGQAFTLGKDLGTAELTRQLAEGALAKLTR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=361, Percent_Identity=30.7479224376731, Blast_Score=143, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37615; Mature: 37484
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQWPDTRILDLFGIELPIIQGPMAGATNSSMVIAACNAGGLGSMPAAMLTIEQLREELK CCCCCCCCCHHHHCCEECEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH TIRQGTNKPFNVNFFCHQPPAADEQKARDWKNLLEPYYRELGVDFDAPTPVSNRAPFDTA HHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH ACEVLEEFRPEVVSFHFGLPEKTLLDRVKATGAKIISSATTVDEAIWLEQNGCDAIIAMG HHHHHHHHCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEC YEAGGHRGMFLSDDLSSQVGTFALVPQVVDAVSVPVIAAGAIADARGVAAAFLLGASAVQ CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHH VGTAYLFTPEAKVSASHHKALRTAKESETAVTNLFTGRPARGILNRVMRELGPMSDKAPA HCEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC FPLAGGALMPLRAKGEAEFSNLWAGQAFTLGKDLGTAELTRQLAEGALAKLTR CCCCCCCCCEECCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQWPDTRILDLFGIELPIIQGPMAGATNSSMVIAACNAGGLGSMPAAMLTIEQLREELK CCCCCCCCHHHHCCEECEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH TIRQGTNKPFNVNFFCHQPPAADEQKARDWKNLLEPYYRELGVDFDAPTPVSNRAPFDTA HHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH ACEVLEEFRPEVVSFHFGLPEKTLLDRVKATGAKIISSATTVDEAIWLEQNGCDAIIAMG HHHHHHHHCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEC YEAGGHRGMFLSDDLSSQVGTFALVPQVVDAVSVPVIAAGAIADARGVAAAFLLGASAVQ CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHH VGTAYLFTPEAKVSASHHKALRTAKESETAVTNLFTGRPARGILNRVMRELGPMSDKAPA HCEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC FPLAGGALMPLRAKGEAEFSNLWAGQAFTLGKDLGTAELTRQLAEGALAKLTR CCCCCCCCCEECCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA