Click here to switch to the map view.

The map label for this gene is ohrR [H]

Identifier: 77458993

GI number: 77458993

Start: 3193884

End: 3194315

Strand: Reverse

Name: ohrR [H]

Synonym: Pfl01_2768

Alternate gene names: 77458993

Gene position: 3194315-3193884 (Counterclockwise)

Preceding gene: 77458994

Following gene: 77458992

Centisome position: 49.61

GC content: 56.48

Gene sequence:

>432_bases
ATGAGTTCGACGCAACGAAGCGTAGCCACAGAACTTTCCTTCGCGCTTAACGCTGCCGCGAACCGGATGGTTCGATTGCA
CAAGCCGTTCCTCGAACCACTGGGCCTAACTTTTTCGCAGTACCTGGTCACGCTTGAGCTCTTGAACGGGTCGCCTCGAT
CTGTGAGCGACTTGTGTGAACGTCTCGACATGGAGACCGGCACGCTTACACCGTTACTCAAAAGGCTGGAAGCTGCCGGG
GTGATTACACGCACACGTGATGCCGTCGATGAACGCCGAGTGCTTATAGACCTCACGGCGTCTGCCCGCGGCATGGAGGA
TGAACTTCGTAGCATCACTGACAAGATCAGAACGGCGTGCCAGCTCACGCCCGAAGACCTTCAGGAGCTTCATCGCACGC
TTGAGGGTTTAGCGCGACCGGCTATCAGTTAA

Upstream 100 bases:

>100_bases
CATTTCATCTGAAAAAAGATTGGAAGCTTCAGAAGCTGTTGACACCTGTAGGAGTCGAGAATAATTTATGTAGCACACTA
CATAATAGCAGGCGATATAT

Downstream 100 bases:

>100_bases
TACCTGCCTCAGAAGCAGCTGACAGAGGCATAGCTTTTAAGGTGATGCCACAAACAAATGAAACACCGGCTCTCCGAGCC
GCGATGCATTTGTAGAACAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSSTQRSVATELSFALNAAANRMVRLHKPFLEPLGLTFSQYLVTLELLNGSPRSVSDLCERLDMETGTLTPLLKRLEAAG
VITRTRDAVDERRVLIDLTASARGMEDELRSITDKIRTACQLTPEDLQELHRTLEGLARPAIS

Sequences:

>Translated_143_residues
MSSTQRSVATELSFALNAAANRMVRLHKPFLEPLGLTFSQYLVTLELLNGSPRSVSDLCERLDMETGTLTPLLKRLEAAG
VITRTRDAVDERRVLIDLTASARGMEDELRSITDKIRTACQLTPEDLQELHRTLEGLARPAIS
>Mature_142_residues
SSTQRSVATELSFALNAAANRMVRLHKPFLEPLGLTFSQYLVTLELLNGSPRSVSDLCERLDMETGTLTPLLKRLEAAGV
ITRTRDAVDERRVLIDLTASARGMEDELRSITDKIRTACQLTPEDLQELHRTLEGLARPAIS

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15878; Mature: 15747

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTQRSVATELSFALNAAANRMVRLHKPFLEPLGLTFSQYLVTLELLNGSPRSVSDLCE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RLDMETGTLTPLLKRLEAAGVITRTRDAVDERRVLIDLTASARGMEDELRSITDKIRTAC
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
QLTPEDLQELHRTLEGLARPAIS
CCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSTQRSVATELSFALNAAANRMVRLHKPFLEPLGLTFSQYLVTLELLNGSPRSVSDLCE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RLDMETGTLTPLLKRLEAAGVITRTRDAVDERRVLIDLTASARGMEDELRSITDKIRTAC
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
QLTPEDLQELHRTLEGLARPAIS
CCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]