Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458858

Identifier: 77458858

GI number: 77458858

Start: 3013958

End: 3014578

Strand: Reverse

Name: 77458858

Synonym: Pfl01_2633

Alternate gene names: NA

Gene position: 3014578-3013958 (Counterclockwise)

Preceding gene: 77458859

Following gene: 77458856

Centisome position: 46.82

GC content: 59.74

Gene sequence:

>621_bases
TTGAATTCGCGGCGCACGGTTGGACTGTTGGTATTGGCGGCACTGTTGAGCGGTTGCGGAACATCGCCACCGCGCTCGCC
GGAAAACCTCTGCGAGATTTTCCGCGAAAAGAGTGATTGGTACGACGCGGCGCAAGTTACGCAAAAGCGCTGGGGCGTAC
CGATCCAGGTGCCGTTCGCGATCATGTATCAGGAGTCCGGTTACCGCTACGACGCCAAGACGCCGCGCAAATACCTGTTG
TGGGTGATCCCGTGGGGCCGGGTTTCGACGGCCTCGGGCTATGCCCAAGCCAAGGATGAAGTCTGGGCCGATTACCAGAA
AAGCACCGGTCGCTACGGCGCCGATCGTGAAGACTTCGACGACGCCATCGACTTCGTTGGCTGGTACATGGACAAGACCA
CCTCGATCAACGGCGTGTACAAGTACGACGCCTACAACCAGTACCTCAACTACCACGAAGGCTGGGGCGGCTTTCGCCAG
AAGACCTACGCCAGCAAGGCGTGGCTGATGCCGGTGGCGCGCAAGGTGCAGAACCGCTCGGACATGTACGGCCAGCAATA
CGCGGCGTGCAAGGATGATTTGAATCGCGGGTTCTGGAGCCGGTTCTGGCATTGGCTCTGA

Upstream 100 bases:

>100_bases
CCCTTACATGCAGTAAAACAGGTCCGGATTTGCCTTATCGCCACCAGTTGACCTGACCGCGTAGACTGGCGCCCTTTTTT
GCACGACGGGATGACGGCTT

Downstream 100 bases:

>100_bases
TCCCAAGCCAAAAAAAACCATCACGAGTTAACTCGCGATGGTTTTTTTTGGCGCGGATTTACAACACCGAAAAGTTGTAA
CTCACAATCAACCGGGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein; Lytic Transglycosylase; Transcriptional Regulator Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFAIMYQESGYRYDAKTPRKYLL
WVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFDDAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQ
KTYASKAWLMPVARKVQNRSDMYGQQYAACKDDLNRGFWSRFWHWL

Sequences:

>Translated_206_residues
MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFAIMYQESGYRYDAKTPRKYLL
WVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFDDAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQ
KTYASKAWLMPVARKVQNRSDMYGQQYAACKDDLNRGFWSRFWHWL
>Mature_206_residues
MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFAIMYQESGYRYDAKTPRKYLL
WVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFDDAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQ
KTYASKAWLMPVARKVQNRSDMYGQQYAACKDDLNRGFWSRFWHWL

Specific function: Unknown

COG id: COG4764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24067; Mature: 24067

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFA
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECEE
IMYQESGYRYDAKTPRKYLLWVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFD
EEEECCCCEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
DAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQKTYASKAWLMPVARKVQNRS
HHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DMYGQQYAACKDDLNRGFWSRFWHWL
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFA
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECEE
IMYQESGYRYDAKTPRKYLLWVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFD
EEEECCCCEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
DAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQKTYASKAWLMPVARKVQNRS
HHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DMYGQQYAACKDDLNRGFWSRFWHWL
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA