| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458858
Identifier: 77458858
GI number: 77458858
Start: 3013958
End: 3014578
Strand: Reverse
Name: 77458858
Synonym: Pfl01_2633
Alternate gene names: NA
Gene position: 3014578-3013958 (Counterclockwise)
Preceding gene: 77458859
Following gene: 77458856
Centisome position: 46.82
GC content: 59.74
Gene sequence:
>621_bases TTGAATTCGCGGCGCACGGTTGGACTGTTGGTATTGGCGGCACTGTTGAGCGGTTGCGGAACATCGCCACCGCGCTCGCC GGAAAACCTCTGCGAGATTTTCCGCGAAAAGAGTGATTGGTACGACGCGGCGCAAGTTACGCAAAAGCGCTGGGGCGTAC CGATCCAGGTGCCGTTCGCGATCATGTATCAGGAGTCCGGTTACCGCTACGACGCCAAGACGCCGCGCAAATACCTGTTG TGGGTGATCCCGTGGGGCCGGGTTTCGACGGCCTCGGGCTATGCCCAAGCCAAGGATGAAGTCTGGGCCGATTACCAGAA AAGCACCGGTCGCTACGGCGCCGATCGTGAAGACTTCGACGACGCCATCGACTTCGTTGGCTGGTACATGGACAAGACCA CCTCGATCAACGGCGTGTACAAGTACGACGCCTACAACCAGTACCTCAACTACCACGAAGGCTGGGGCGGCTTTCGCCAG AAGACCTACGCCAGCAAGGCGTGGCTGATGCCGGTGGCGCGCAAGGTGCAGAACCGCTCGGACATGTACGGCCAGCAATA CGCGGCGTGCAAGGATGATTTGAATCGCGGGTTCTGGAGCCGGTTCTGGCATTGGCTCTGA
Upstream 100 bases:
>100_bases CCCTTACATGCAGTAAAACAGGTCCGGATTTGCCTTATCGCCACCAGTTGACCTGACCGCGTAGACTGGCGCCCTTTTTT GCACGACGGGATGACGGCTT
Downstream 100 bases:
>100_bases TCCCAAGCCAAAAAAAACCATCACGAGTTAACTCGCGATGGTTTTTTTTGGCGCGGATTTACAACACCGAAAAGTTGTAA CTCACAATCAACCGGGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulatory Protein; Lytic Transglycosylase Catalytic; Soluble Lytic Murein Transglycosylase; Glycoside Hydroylase Family; Lytic Murein Transglycosylase; Glycoside Hydrolase Family Protein; Transmembrane Protein; Transglycosylase SLT Domain; Conserved Secreted Protein; Lytic Transglycosylase; Transcriptional Regulator Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFAIMYQESGYRYDAKTPRKYLL WVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFDDAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQ KTYASKAWLMPVARKVQNRSDMYGQQYAACKDDLNRGFWSRFWHWL
Sequences:
>Translated_206_residues MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFAIMYQESGYRYDAKTPRKYLL WVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFDDAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQ KTYASKAWLMPVARKVQNRSDMYGQQYAACKDDLNRGFWSRFWHWL >Mature_206_residues MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFAIMYQESGYRYDAKTPRKYLL WVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFDDAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQ KTYASKAWLMPVARKVQNRSDMYGQQYAACKDDLNRGFWSRFWHWL
Specific function: Unknown
COG id: COG4764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24067; Mature: 24067
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFA CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECEE IMYQESGYRYDAKTPRKYLLWVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFD EEEECCCCEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH DAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQKTYASKAWLMPVARKVQNRS HHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DMYGQQYAACKDDLNRGFWSRFWHWL HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSRRTVGLLVLAALLSGCGTSPPRSPENLCEIFREKSDWYDAAQVTQKRWGVPIQVPFA CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECEE IMYQESGYRYDAKTPRKYLLWVIPWGRVSTASGYAQAKDEVWADYQKSTGRYGADREDFD EEEECCCCEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH DAIDFVGWYMDKTTSINGVYKYDAYNQYLNYHEGWGGFRQKTYASKAWLMPVARKVQNRS HHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DMYGQQYAACKDDLNRGFWSRFWHWL HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA