Click here to switch to the map view.

The map label for this gene is 77458856

Identifier: 77458856

GI number: 77458856

Start: 3010181

End: 3012235

Strand: Reverse

Name: 77458856

Synonym: Pfl01_2631

Alternate gene names: NA

Gene position: 3012235-3010181 (Counterclockwise)

Preceding gene: 77458858

Following gene: 77458855

Centisome position: 46.79

GC content: 61.17

Gene sequence:

>2055_bases
ATGCTGGACGCCAATGCTACCCACATTACCCTCACGCTCGAAGGCGCTTCCGCCGACCTGCAAGTCCTCAGTTTCACCGG
TCGCGAAGCCCTCAACGAACCGTTCCGTTTCGACCTCGAACTGGTCAGCGCCCGTCCCGACCTCAATCTTGAAGAACTCC
TGCACAAGCCTGGCTGCCTGACCTTCGGCGCCACTGGCGAGGGCACGATTCATGGCCTGGTGTATCGCATCGAACAAGGC
GATTCCGGCAAGACCCTGACCCGTTACAGCCTGAGCCTGGTGCCGCAACTGGCCTACCTGCGGCACAACCATGACCAGCA
GATTTTCCAGAACCTCACCGTGCCGAAGATCATCGCCCAGGTGCTGGAAGAACGCGGGATTCTGGGCAATGCCTACAGCT
TCCAGCTCGGCGCCGAATACCCGGAACGCGACTACTGCGTGCAGTACGACGAATCCGACCTGCATTTCATCCAGCGTCTG
TGCGAAGAGGAAGGCATTCACTTCCACTTCCAGCACAGCAGCAGCGGCCACAAACTGGTGTTCGGCGACGACCAGACCGT
GTTCCGCAAACTGAAACCGGTCAACTACCAGCAAGACTCCGGCATGACCGCCGACAAACCGGTGATCAAGCGCTTCAACC
TGCGCCTGGAAACCCGTACCAGCCGCGTCAGCCGCCGCGACTACGATTTCGAAAAACCGAAGATCCTGCCCGAAGGCGCC
GCTAAATCCGAGTTCATGCCGGACCTGGAAGACTACGACTACCCCGGCCGCTTCACCACGCGCGAGCGCGGCAAATTCCT
CTCGACCCGCGCGCTGGAACGCCATCGCAGCGACTACAAACTCGCCGAAGGCAAAGGTGACGAGCCGACCCTGACCAGCG
GCCACTTCATGACCCTGGCCGAACACCCGCGCGCCGAATGGAACGATCTGTGGCTGTTGCTGGAAGTCTTCCACGAAGGC
AAACAGCCGCAAGTGCTGGGCGAAAACGTCACCAGCGACGTCACCGACAACAAAAGCGATTTCCACCAGGGCTACCGCAA
CAGCTTCGTGGCCACCCCGTGGGACGCCCACTACCGCCCTGCCCTCGAACACCCGAAACCGAAAGTCCTCGGCAGCCAGA
CCGCCATCGTCACCGGCCCCGCTGGCGAAGAAATCCACTGCGACCAGTACGGCCGCGTGAAAGTGCAATTCCACTGGGAC
CGCGACGGCCAGGCCGACGACAAGACCACCTGCTGGCTGCGCGTCGCCAGCGGCTGGGCCGGCGCAGCCTACGGCGGCAT
CGCCATTCCACGGATCGGCATGGAAGTGCTGGTGACCTTCCTCGAAGGCGACCCCGACCAACCGTTGGTGACCGGTTGCC
TGTACCACAAGGAAAACGTCGTCCCCTACGCCCTGCCGGCGAACAAGACCCGCAGCACCTTCAAGACCCTAAGTTCACCG
GGCGGCAAGGGCTACAACGAATTCCGCATCGAAGACAAGAAAGGCGCGGAACAGATCTACATCCACGCCCAGCGCGACTG
GGACGAGAACATCGAGCACGACCAGAAAATCCGCGTCGGCAACGAACGGCATGACACGGTTGAAGCCAACACGTACAGCG
AGTTCAAGGTCGAAGAACACCGCATCACTCACTTGAATCGCATCAGTGAAATGCGTGCCAACGATCACCTGACCGTCGCC
GTGACCCAGCACCTCAAGGTCGGCACGGCGCAACTGGTCGAAGCGGGAACCGAGATCCACTACTACGCCGGCCAGAAAGT
CGTGATCGAAGGCGCAATGGAACTGACCGCCAAGGCCGGCGGCAGCTTCGTCAAAGCCGATGCCGGCGGCGTGACCATCA
GTGGTGCCGAAGTGAAGATCAACACCGGCGGCGCGCCGGGCGTGGGAACACCGGCAGCGCCGTTGTTGCCGGGGCCGATG
AAGGTGGTGGATGCGGATAAGGCTGGGAAAGTCCCGATTCCGCTGCCTAAACGACTGAATGAATCCGGTATCACGCCGCT
GTGCGGAAAACAGAGTAACGGCGCTTGCAGCCGTAAGGATTGCACATGCATGTAA

Upstream 100 bases:

>100_bases
ATGGGTTCGGACCGCAGCATCTACGGCATTTGCGCCTTGAACGAGGCCGTTTAATCCTGCACCATCCGCCCACGCTAATC
CAAAGGACGGAAAACAAGGC

Downstream 100 bases:

>100_bases
AAGCGCTGAGTGCTTTGTTGGCGGCTCCGCGCCACACATTCGAACAGCTACCCCGAGAGAGCGCCGGCTCGACACTGTGT
TTCATCATTGACCGTACCCG

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; VgrG-Like Protein; RHS Accessory Genetic Element; Vgr Protein; Two Component LuxR Family Transcriptional Regulator; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MLDANATHITLTLEGASADLQVLSFTGREALNEPFRFDLELVSARPDLNLEELLHKPGCLTFGATGEGTIHGLVYRIEQG
DSGKTLTRYSLSLVPQLAYLRHNHDQQIFQNLTVPKIIAQVLEERGILGNAYSFQLGAEYPERDYCVQYDESDLHFIQRL
CEEEGIHFHFQHSSSGHKLVFGDDQTVFRKLKPVNYQQDSGMTADKPVIKRFNLRLETRTSRVSRRDYDFEKPKILPEGA
AKSEFMPDLEDYDYPGRFTTRERGKFLSTRALERHRSDYKLAEGKGDEPTLTSGHFMTLAEHPRAEWNDLWLLLEVFHEG
KQPQVLGENVTSDVTDNKSDFHQGYRNSFVATPWDAHYRPALEHPKPKVLGSQTAIVTGPAGEEIHCDQYGRVKVQFHWD
RDGQADDKTTCWLRVASGWAGAAYGGIAIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENVVPYALPANKTRSTFKTLSSP
GGKGYNEFRIEDKKGAEQIYIHAQRDWDENIEHDQKIRVGNERHDTVEANTYSEFKVEEHRITHLNRISEMRANDHLTVA
VTQHLKVGTAQLVEAGTEIHYYAGQKVVIEGAMELTAKAGGSFVKADAGGVTISGAEVKINTGGAPGVGTPAAPLLPGPM
KVVDADKAGKVPIPLPKRLNESGITPLCGKQSNGACSRKDCTCM

Sequences:

>Translated_684_residues
MLDANATHITLTLEGASADLQVLSFTGREALNEPFRFDLELVSARPDLNLEELLHKPGCLTFGATGEGTIHGLVYRIEQG
DSGKTLTRYSLSLVPQLAYLRHNHDQQIFQNLTVPKIIAQVLEERGILGNAYSFQLGAEYPERDYCVQYDESDLHFIQRL
CEEEGIHFHFQHSSSGHKLVFGDDQTVFRKLKPVNYQQDSGMTADKPVIKRFNLRLETRTSRVSRRDYDFEKPKILPEGA
AKSEFMPDLEDYDYPGRFTTRERGKFLSTRALERHRSDYKLAEGKGDEPTLTSGHFMTLAEHPRAEWNDLWLLLEVFHEG
KQPQVLGENVTSDVTDNKSDFHQGYRNSFVATPWDAHYRPALEHPKPKVLGSQTAIVTGPAGEEIHCDQYGRVKVQFHWD
RDGQADDKTTCWLRVASGWAGAAYGGIAIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENVVPYALPANKTRSTFKTLSSP
GGKGYNEFRIEDKKGAEQIYIHAQRDWDENIEHDQKIRVGNERHDTVEANTYSEFKVEEHRITHLNRISEMRANDHLTVA
VTQHLKVGTAQLVEAGTEIHYYAGQKVVIEGAMELTAKAGGSFVKADAGGVTISGAEVKINTGGAPGVGTPAAPLLPGPM
KVVDADKAGKVPIPLPKRLNESGITPLCGKQSNGACSRKDCTCM
>Mature_684_residues
MLDANATHITLTLEGASADLQVLSFTGREALNEPFRFDLELVSARPDLNLEELLHKPGCLTFGATGEGTIHGLVYRIEQG
DSGKTLTRYSLSLVPQLAYLRHNHDQQIFQNLTVPKIIAQVLEERGILGNAYSFQLGAEYPERDYCVQYDESDLHFIQRL
CEEEGIHFHFQHSSSGHKLVFGDDQTVFRKLKPVNYQQDSGMTADKPVIKRFNLRLETRTSRVSRRDYDFEKPKILPEGA
AKSEFMPDLEDYDYPGRFTTRERGKFLSTRALERHRSDYKLAEGKGDEPTLTSGHFMTLAEHPRAEWNDLWLLLEVFHEG
KQPQVLGENVTSDVTDNKSDFHQGYRNSFVATPWDAHYRPALEHPKPKVLGSQTAIVTGPAGEEIHCDQYGRVKVQFHWD
RDGQADDKTTCWLRVASGWAGAAYGGIAIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENVVPYALPANKTRSTFKTLSSP
GGKGYNEFRIEDKKGAEQIYIHAQRDWDENIEHDQKIRVGNERHDTVEANTYSEFKVEEHRITHLNRISEMRANDHLTVA
VTQHLKVGTAQLVEAGTEIHYYAGQKVVIEGAMELTAKAGGSFVKADAGGVTISGAEVKINTGGAPGVGTPAAPLLPGPM
KVVDADKAGKVPIPLPKRLNESGITPLCGKQSNGACSRKDCTCM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76266; Mature: 76266

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDANATHITLTLEGASADLQVLSFTGREALNEPFRFDLELVSARPDLNLEELLHKPGCL
CCCCCCEEEEEEEECCCCCEEEEEECCHHHCCCCCEEEEEEEECCCCCCHHHHHCCCCCE
TFGATGEGTIHGLVYRIEQGDSGKTLTRYSLSLVPQLAYLRHNHDQQIFQNLTVPKIIAQ
EECCCCCCEEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH
VLEERGILGNAYSFQLGAEYPERDYCVQYDESDLHFIQRLCEEEGIHFHFQHSSSGHKLV
HHHHCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCEEE
FGDDQTVFRKLKPVNYQQDSGMTADKPVIKRFNLRLETRTSRVSRRDYDFEKPKILPEGA
ECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCEEEEEHHHHHHHCCCCCCCCCCCCCCC
AKSEFMPDLEDYDYPGRFTTRERGKFLSTRALERHRSDYKLAEGKGDEPTLTSGHFMTLA
CCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEC
EHPRAEWNDLWLLLEVFHEGKQPQVLGENVTSDVTDNKSDFHQGYRNSFVATPWDAHYRP
CCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCC
ALEHPKPKVLGSQTAIVTGPAGEEIHCDQYGRVKVQFHWDRDGQADDKTTCWLRVASGWA
CCCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCC
GAAYGGIAIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENVVPYALPANKTRSTFKTLSSP
CCCCCCEECCHHCHHHHHHHHCCCCCCCHHEEEEECCCCCCEEECCCCCHHHHHHHHCCC
GGKGYNEFRIEDKKGAEQIYIHAQRDWDENIEHDQKIRVGNERHDTVEANTYSEFKVEEH
CCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEHHH
RITHLNRISEMRANDHLTVAVTQHLKVGTAQLVEAGTEIHYYAGQKVVIEGAMELTAKAG
HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECHHHHHHHCC
GSFVKADAGGVTISGAEVKINTGGAPGVGTPAAPLLPGPMKVVDADKAGKVPIPLPKRLN
CCEEEECCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCC
ESGITPLCGKQSNGACSRKDCTCM
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDANATHITLTLEGASADLQVLSFTGREALNEPFRFDLELVSARPDLNLEELLHKPGCL
CCCCCCEEEEEEEECCCCCEEEEEECCHHHCCCCCEEEEEEEECCCCCCHHHHHCCCCCE
TFGATGEGTIHGLVYRIEQGDSGKTLTRYSLSLVPQLAYLRHNHDQQIFQNLTVPKIIAQ
EECCCCCCEEEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH
VLEERGILGNAYSFQLGAEYPERDYCVQYDESDLHFIQRLCEEEGIHFHFQHSSSGHKLV
HHHHCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCEEE
FGDDQTVFRKLKPVNYQQDSGMTADKPVIKRFNLRLETRTSRVSRRDYDFEKPKILPEGA
ECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCEEEEEHHHHHHHCCCCCCCCCCCCCCC
AKSEFMPDLEDYDYPGRFTTRERGKFLSTRALERHRSDYKLAEGKGDEPTLTSGHFMTLA
CCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEC
EHPRAEWNDLWLLLEVFHEGKQPQVLGENVTSDVTDNKSDFHQGYRNSFVATPWDAHYRP
CCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCC
ALEHPKPKVLGSQTAIVTGPAGEEIHCDQYGRVKVQFHWDRDGQADDKTTCWLRVASGWA
CCCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCC
GAAYGGIAIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENVVPYALPANKTRSTFKTLSSP
CCCCCCEECCHHCHHHHHHHHCCCCCCCHHEEEEECCCCCCEEECCCCCHHHHHHHHCCC
GGKGYNEFRIEDKKGAEQIYIHAQRDWDENIEHDQKIRVGNERHDTVEANTYSEFKVEEH
CCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCCCEEEHHH
RITHLNRISEMRANDHLTVAVTQHLKVGTAQLVEAGTEIHYYAGQKVVIEGAMELTAKAG
HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCEEEEECCCEEEEECHHHHHHHCC
GSFVKADAGGVTISGAEVKINTGGAPGVGTPAAPLLPGPMKVVDADKAGKVPIPLPKRLN
CCEEEECCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCC
ESGITPLCGKQSNGACSRKDCTCM
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA