| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458852
Identifier: 77458852
GI number: 77458852
Start: 3003866
End: 3004867
Strand: Reverse
Name: 77458852
Synonym: Pfl01_2627
Alternate gene names: NA
Gene position: 3004867-3003866 (Counterclockwise)
Preceding gene: 77458853
Following gene: 77458851
Centisome position: 46.67
GC content: 45.71
Gene sequence:
>1002_bases ATGCAACACGCAGAAGGACGAAGCAAGATGTTCCGCACACCAATAAAAGCCATGGCATTGATTGCATTAATATTTTCAAC CTACGCTTTCGCTCAGCTCACTCCTGAACAAGAAGCCGCGAAAAAGCGCGGAATTACACTATTCAATCAATATAAAACAG CCGAACCCGAATTACGTATTGCAGCAGAAGCTGGAGATACGGAGGCTCAATTTTATTTAGGTGAAGAGCTACGCCAGCAG AGTCAGTATATAACCGCTGAAGCTCAGAACTGGTATGAAGCAGCGGCTCTTCAAGGCGACCTCTATGCAATGCTGCGATT AGCAACATCAGAAAACGACCTGTGCAACGTAATGAACAACTGCACTCAAAGCTCAAAAAAACGTACTGACTGGATTGACC TTTTAAACAAAGAAACGGAAAAAAGAGCGAACAACAACGATGGCGAAGCCATGTATGTTAAGTATTTGTACACTGGGCAA TTAGAGTGGCTTGAAAAATCCGCTGAATTCAAATTCGCGAGAAGCCAATGGCTACTGGCAAGCCGGTACAAGGAAGGTGA GAAATTTTTTCTACCTTGGAAACGTTCGGAGGAAGTTGGGCGATTATTGAAGGCGTCGGCAGAAAATGGTTTCCCCGCAG GTATGCTTGAATATGCGGCGTATCTGTATGAACACGGAGGAGATCTCAGCGATGCTCGCTACTGGATCGAAGAAGCGGCC AAGACCGGCTATCAATCCGGGGTAAGCAGTTATGGAGCATACCTAGCACATGCCTCTTCCCTTTATGACTTCCCACTGGA CTTAGTTAAAGGTTACGCGCTCACATCGCTTTTAACAGAACTTGATGGCGGTGGAAACATAAAGCCTTATGTCGATGAAG TACTGCCAGAAATAGCAAGCAAAATGAGTCCGGCGCAGATTACAGAAGCAAAAGCATTTGCAAAGCAATGGAAAGACACT CACCCGCCACTTTCTTTCTACCCAGGGAAATATGGCCTGTGA
Upstream 100 bases:
>100_bases TATTTACTGGCGTGGGGAACTACACAAAATTGAACTACCCACGTCATCGCGCTAAATTTCAAGAAAGACTTTTGTCACAT GTGGAAAAACAGTTAAGAGG
Downstream 100 bases:
>100_bases TGCGGACCGTGCCACTCAAAGCGTCACTAAAGTTAAATACGAAGTGATTAGAGGTAATATGACTATCGAGCAGATTGAAT GCTCGAAATCTGTGACAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MQHAEGRSKMFRTPIKAMALIALIFSTYAFAQLTPEQEAAKKRGITLFNQYKTAEPELRIAAEAGDTEAQFYLGEELRQQ SQYITAEAQNWYEAAALQGDLYAMLRLATSENDLCNVMNNCTQSSKKRTDWIDLLNKETEKRANNNDGEAMYVKYLYTGQ LEWLEKSAEFKFARSQWLLASRYKEGEKFFLPWKRSEEVGRLLKASAENGFPAGMLEYAAYLYEHGGDLSDARYWIEEAA KTGYQSGVSSYGAYLAHASSLYDFPLDLVKGYALTSLLTELDGGGNIKPYVDEVLPEIASKMSPAQITEAKAFAKQWKDT HPPLSFYPGKYGL
Sequences:
>Translated_333_residues MQHAEGRSKMFRTPIKAMALIALIFSTYAFAQLTPEQEAAKKRGITLFNQYKTAEPELRIAAEAGDTEAQFYLGEELRQQ SQYITAEAQNWYEAAALQGDLYAMLRLATSENDLCNVMNNCTQSSKKRTDWIDLLNKETEKRANNNDGEAMYVKYLYTGQ LEWLEKSAEFKFARSQWLLASRYKEGEKFFLPWKRSEEVGRLLKASAENGFPAGMLEYAAYLYEHGGDLSDARYWIEEAA KTGYQSGVSSYGAYLAHASSLYDFPLDLVKGYALTSLLTELDGGGNIKPYVDEVLPEIASKMSPAQITEAKAFAKQWKDT HPPLSFYPGKYGL >Mature_333_residues MQHAEGRSKMFRTPIKAMALIALIFSTYAFAQLTPEQEAAKKRGITLFNQYKTAEPELRIAAEAGDTEAQFYLGEELRQQ SQYITAEAQNWYEAAALQGDLYAMLRLATSENDLCNVMNNCTQSSKKRTDWIDLLNKETEKRANNNDGEAMYVKYLYTGQ LEWLEKSAEFKFARSQWLLASRYKEGEKFFLPWKRSEEVGRLLKASAENGFPAGMLEYAAYLYEHGGDLSDARYWIEEAA KTGYQSGVSSYGAYLAHASSLYDFPLDLVKGYALTSLLTELDGGGNIKPYVDEVLPEIASKMSPAQITEAKAFAKQWKDT HPPLSFYPGKYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37620; Mature: 37620
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHAEGRSKMFRTPIKAMALIALIFSTYAFAQLTPEQEAAKKRGITLFNQYKTAEPELRI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCCCCEEE AAEAGDTEAQFYLGEELRQQSQYITAEAQNWYEAAALQGDLYAMLRLATSENDLCNVMNN EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH CTQSSKKRTDWIDLLNKETEKRANNNDGEAMYVKYLYTGQLEWLEKSAEFKFARSQWLLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH SRYKEGEKFFLPWKRSEEVGRLLKASAENGFPAGMLEYAAYLYEHGGDLSDARYWIEEAA HHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH KTGYQSGVSSYGAYLAHASSLYDFPLDLVKGYALTSLLTELDGGGNIKPYVDEVLPEIAS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KMSPAQITEAKAFAKQWKDTHPPLSFYPGKYGL HCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MQHAEGRSKMFRTPIKAMALIALIFSTYAFAQLTPEQEAAKKRGITLFNQYKTAEPELRI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCCCCEEE AAEAGDTEAQFYLGEELRQQSQYITAEAQNWYEAAALQGDLYAMLRLATSENDLCNVMNN EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH CTQSSKKRTDWIDLLNKETEKRANNNDGEAMYVKYLYTGQLEWLEKSAEFKFARSQWLLA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH SRYKEGEKFFLPWKRSEEVGRLLKASAENGFPAGMLEYAAYLYEHGGDLSDARYWIEEAA HHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH KTGYQSGVSSYGAYLAHASSLYDFPLDLVKGYALTSLLTELDGGGNIKPYVDEVLPEIAS HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KMSPAQITEAKAFAKQWKDTHPPLSFYPGKYGL HCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA