| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458853
Identifier: 77458853
GI number: 77458853
Start: 3005018
End: 3006004
Strand: Reverse
Name: 77458853
Synonym: Pfl01_2628
Alternate gene names: NA
Gene position: 3006004-3005018 (Counterclockwise)
Preceding gene: 77458854
Following gene: 77458852
Centisome position: 46.69
GC content: 45.9
Gene sequence:
>987_bases ATGATTAAAAATAAGCACTACAAATCAATAGCCCAAGTTTTTTTTGTGTTCCTAGCCTTTGCATCTCATTCCGCGATGGC GCTTACAAGCGATCAGGCGATTGCTAAAGAAAAAGGAATTACGCTTTTTAATCAATATAAATCTGCTGAAGCGGAACTTC GGATTGCTGCAGAAGCAGGTGACGCTGAAGCACAGTTCTACCTAGCTGAAGAAATCCGACAAAGAAGCCAATACATTACG CCTGAGGCAAAAAAATGGTTGGAAGCGGCAAGTGCACAGGGTGATCTGTACGCCATGCTTAGGCTCGCCCGCTCGGATAA TGATCTCTGTACGACGATGAAAAACTGCCCTCCCGGGCAAAAAACTTCGGCAGAGTGGATGAATATAGTTAAAGAGTTGG CTACATCTAAAGCTGAAAAGGGTGACGCCGAATCCGCTTATGTCATGTATTTGGCGACTGGCCAGTTGGAGTGGTTAAAA AAATCCGCAGAGTCTGGTTTTGCTCAAGGTCAATGGCTGCTTGCTATTCGATATAAGGAAGGTAATGGATCCTTTTTGTT GCCTTGGAAACGGTCGGAAGCTGTCGAGAACTGGGCAAAGGCGTCTGCTCTTGGAGGCAATCCCAAGGGAATGATGGAGT ACGCTGCCATTCTTTTCGAGAAGGGTGACATGGAAAGTTTTCGATATTGGAACGAACAGGCTGCCTCAATTGGCTTCGCC ACTACGGTGTACGGGTATGGATCAGACCTGGCCCATGAGCCTGATACGTATGGCTTCCCTTATGACATAATCAAAGGGTA CGCCTTGATTTATTTATTGAAAGAACTTGATGGCGGAGGCGGCATGGATGCCAACGTCAATGATAAGCTTCCTAAAATCG CTGCAAAAATGACACAAACGCAAATAGCGGAAGCAAAAGTATTCGCACAAAAGTGGAAAGCCACACACCCGCCGCTCTCT TTTTTCCCTGATAAGTTAGGTGACTAA
Upstream 100 bases:
>100_bases GCGAGCGGCTAGACGGCTATTGCTCTCGGATTACACACTACGGAAGAACATATTTGCCAGGTGGAAAAGCAACCTATACC GGACCGGACGATAGCGTAAA
Downstream 100 bases:
>100_bases TACGGTCGCACCCCCTTAATTACTTTGAAAGACAGCGCTTGGAACTACTATATTTACTGGCGTGGGGAACTACACAAAAT TGAACTACCCACGTCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MIKNKHYKSIAQVFFVFLAFASHSAMALTSDQAIAKEKGITLFNQYKSAEAELRIAAEAGDAEAQFYLAEEIRQRSQYIT PEAKKWLEAASAQGDLYAMLRLARSDNDLCTTMKNCPPGQKTSAEWMNIVKELATSKAEKGDAESAYVMYLATGQLEWLK KSAESGFAQGQWLLAIRYKEGNGSFLLPWKRSEAVENWAKASALGGNPKGMMEYAAILFEKGDMESFRYWNEQAASIGFA TTVYGYGSDLAHEPDTYGFPYDIIKGYALIYLLKELDGGGGMDANVNDKLPKIAAKMTQTQIAEAKVFAQKWKATHPPLS FFPDKLGD
Sequences:
>Translated_328_residues MIKNKHYKSIAQVFFVFLAFASHSAMALTSDQAIAKEKGITLFNQYKSAEAELRIAAEAGDAEAQFYLAEEIRQRSQYIT PEAKKWLEAASAQGDLYAMLRLARSDNDLCTTMKNCPPGQKTSAEWMNIVKELATSKAEKGDAESAYVMYLATGQLEWLK KSAESGFAQGQWLLAIRYKEGNGSFLLPWKRSEAVENWAKASALGGNPKGMMEYAAILFEKGDMESFRYWNEQAASIGFA TTVYGYGSDLAHEPDTYGFPYDIIKGYALIYLLKELDGGGGMDANVNDKLPKIAAKMTQTQIAEAKVFAQKWKATHPPLS FFPDKLGD >Mature_328_residues MIKNKHYKSIAQVFFVFLAFASHSAMALTSDQAIAKEKGITLFNQYKSAEAELRIAAEAGDAEAQFYLAEEIRQRSQYIT PEAKKWLEAASAQGDLYAMLRLARSDNDLCTTMKNCPPGQKTSAEWMNIVKELATSKAEKGDAESAYVMYLATGQLEWLK KSAESGFAQGQWLLAIRYKEGNGSFLLPWKRSEAVENWAKASALGGNPKGMMEYAAILFEKGDMESFRYWNEQAASIGFA TTVYGYGSDLAHEPDTYGFPYDIIKGYALIYLLKELDGGGGMDANVNDKLPKIAAKMTQTQIAEAKVFAQKWKATHPPLS FFPDKLGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36401; Mature: 36401
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNKHYKSIAQVFFVFLAFASHSAMALTSDQAIAKEKGITLFNQYKSAEAELRIAAEAG CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCHHHHHHCCCCCEEEEEECCC DAEAQFYLAEEIRQRSQYITPEAKKWLEAASAQGDLYAMLRLARSDNDLCTTMKNCPPGQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCC KTSAEWMNIVKELATSKAEKGDAESAYVMYLATGQLEWLKKSAESGFAQGQWLLAIRYKE CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEC GNGSFLLPWKRSEAVENWAKASALGGNPKGMMEYAAILFEKGDMESFRYWNEQAASIGFA CCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH TTVYGYGSDLAHEPDTYGFPYDIIKGYALIYLLKELDGGGGMDANVNDKLPKIAAKMTQT HEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH QIAEAKVFAQKWKATHPPLSFFPDKLGD HHHHHHHHHHHHCCCCCCHHHCCHHCCC >Mature Secondary Structure MIKNKHYKSIAQVFFVFLAFASHSAMALTSDQAIAKEKGITLFNQYKSAEAELRIAAEAG CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCHHHHHHCCCCCEEEEEECCC DAEAQFYLAEEIRQRSQYITPEAKKWLEAASAQGDLYAMLRLARSDNDLCTTMKNCPPGQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCC KTSAEWMNIVKELATSKAEKGDAESAYVMYLATGQLEWLKKSAESGFAQGQWLLAIRYKE CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEC GNGSFLLPWKRSEAVENWAKASALGGNPKGMMEYAAILFEKGDMESFRYWNEQAASIGFA CCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHH TTVYGYGSDLAHEPDTYGFPYDIIKGYALIYLLKELDGGGGMDANVNDKLPKIAAKMTQT HEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH QIAEAKVFAQKWKATHPPLSFFPDKLGD HHHHHHHHHHHHCCCCCCHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA