| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458851
Identifier: 77458851
GI number: 77458851
Start: 3002689
End: 3003441
Strand: Reverse
Name: 77458851
Synonym: Pfl01_2626
Alternate gene names: NA
Gene position: 3003441-3002689 (Counterclockwise)
Preceding gene: 77458852
Following gene: 77458850
Centisome position: 46.65
GC content: 44.49
Gene sequence:
>753_bases ATGACTAAGGACGCGCAAAAAGCTTACGAAGAGTCTGCCCAAAGAGGCAATATCTATTCGATGATACGGCTTGGTGAAGC GGGCGAAGATTTGTGCGTAACGATGAAAAATTGTTCTTTTGCGGAGCATTCGCCCGAAGAGTGGACAAATAAAGCTAAAG AGCTTGCAACTGAACTGGCATCAAAAGGAAACACTGAGTCAATGTATCTGTTATGGAAAATAACAGGAAATGATGACTGG TTAGAAAAATCTGCGGAAGGTGGCTTCGCGTTGGCTCAGTTTCGTTTGGCCACTAAGTACCAAGAAGGGGGCGGTACATT CCTATTGCCATCAAGAAGATCTGATGCGATTGAAAAATGGATGAAGGCGTCTGCGGAAAATGGCTATCCACCGGGCATGA TGGGCTTCGCAGCATCCAGAATGGAAAAAAAAGATTTATCGTCCTTCAGACTTTGGAATGAACGAGCTGCTGCGTCGAGC TATGTATCAGGTGTTTTTGGTTATGCGTTATATATTGGGGGAATAGAGCCAACATACGGATTTACACCTGACCCAATAAC GTCATTTGCTCTACTAACAAACCTGCTAGAGCTTGATGGCGGCGGAAACATGATAAACAATGTTAAAGACACATTGCCCG AGGTTGAAAAAAACATGACCAAAGAGCAGCTGGCAGAAGCAAAAAGGCTCGCAAAAACCTGGAAGTCCACCCATCCACCT CTCTCGTTTTATCCGGAAAAATTAGGACATTGA
Upstream 100 bases:
>100_bases AGCTATTTCTGCAATTGATTTCCTAAGAATCGCAGCCGACGGCGGTGATGACGAAGCACTTTACTACTTAGGCGAAGCGA TAAGGAAAAATAACCACTAT
Downstream 100 bases:
>100_bases AACCAGTGAGGTTATTAATAAACCGCTTAATCTTGACGGTTTTTATATGCTTCACACCTAACTCTTTCTCGGAGCCGGTG CGTGAAGCTTCTTCAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTKDAQKAYEESAQRGNIYSMIRLGEAGEDLCVTMKNCSFAEHSPEEWTNKAKELATELASKGNTESMYLLWKITGNDDW LEKSAEGGFALAQFRLATKYQEGGGTFLLPSRRSDAIEKWMKASAENGYPPGMMGFAASRMEKKDLSSFRLWNERAAASS YVSGVFGYALYIGGIEPTYGFTPDPITSFALLTNLLELDGGGNMINNVKDTLPEVEKNMTKEQLAEAKRLAKTWKSTHPP LSFYPEKLGH
Sequences:
>Translated_250_residues MTKDAQKAYEESAQRGNIYSMIRLGEAGEDLCVTMKNCSFAEHSPEEWTNKAKELATELASKGNTESMYLLWKITGNDDW LEKSAEGGFALAQFRLATKYQEGGGTFLLPSRRSDAIEKWMKASAENGYPPGMMGFAASRMEKKDLSSFRLWNERAAASS YVSGVFGYALYIGGIEPTYGFTPDPITSFALLTNLLELDGGGNMINNVKDTLPEVEKNMTKEQLAEAKRLAKTWKSTHPP LSFYPEKLGH >Mature_249_residues TKDAQKAYEESAQRGNIYSMIRLGEAGEDLCVTMKNCSFAEHSPEEWTNKAKELATELASKGNTESMYLLWKITGNDDWL EKSAEGGFALAQFRLATKYQEGGGTFLLPSRRSDAIEKWMKASAENGYPPGMMGFAASRMEKKDLSSFRLWNERAAASSY VSGVFGYALYIGGIEPTYGFTPDPITSFALLTNLLELDGGGNMINNVKDTLPEVEKNMTKEQLAEAKRLAKTWKSTHPPL SFYPEKLGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27772; Mature: 27640
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDAQKAYEESAQRGNIYSMIRLGEAGEDLCVTMKNCSFAEHSPEEWTNKAKELATELA CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH SKGNTESMYLLWKITGNDDWLEKSAEGGFALAQFRLATKYQEGGGTFLLPSRRSDAIEKW HCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH MKASAENGYPPGMMGFAASRMEKKDLSSFRLWNERAAASSYVSGVFGYALYIGGIEPTYG HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FTPDPITSFALLTNLLELDGGGNMINNVKDTLPEVEKNMTKEQLAEAKRLAKTWKSTHPP CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC LSFYPEKLGH CCCCHHHHCC >Mature Secondary Structure TKDAQKAYEESAQRGNIYSMIRLGEAGEDLCVTMKNCSFAEHSPEEWTNKAKELATELA CCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH SKGNTESMYLLWKITGNDDWLEKSAEGGFALAQFRLATKYQEGGGTFLLPSRRSDAIEKW HCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH MKASAENGYPPGMMGFAASRMEKKDLSSFRLWNERAAASSYVSGVFGYALYIGGIEPTYG HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC FTPDPITSFALLTNLLELDGGGNMINNVKDTLPEVEKNMTKEQLAEAKRLAKTWKSTHPP CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC LSFYPEKLGH CCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA