| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458787
Identifier: 77458787
GI number: 77458787
Start: 2935310
End: 2935687
Strand: Reverse
Name: 77458787
Synonym: Pfl01_2562
Alternate gene names: NA
Gene position: 2935687-2935310 (Counterclockwise)
Preceding gene: 77458789
Following gene: 77458785
Centisome position: 45.6
GC content: 58.99
Gene sequence:
>378_bases ATGTACAACCCACCCCTACCATCGGAAGGTAGCCAGACCCTACAAGGAGCGCCCATGGGTTCGCACGTCGACGTATTCGG GCAACGGATCGAGCGTCACGGCAATGAACGCATCCGCTTGCTGCTAAAAAGCTTTGGCCTGCGCACCAGTCTGATTCGCC TCAAAGTCATCGACACCCTGCTGGTCGCCGCCGAAGACGATCGTCGTCTGGGTGTGCGTGGCGTTCACAGCCAGTTGCTG GATCTGGACATTCCCTTGTCCTTCCTCAGCGTTCGCGAAGTGCTCAAGCGCCTGTGCGCCGAAGGCGTGATCACGTTCAA CGACGACAAGAGCTACAGTCTCCATCCCCAGGCTGCGGCCGTGCTCAACCACGATTGA
Upstream 100 bases:
>100_bases TTTTCTACATTTTTCGCTTCATGATTTGTCGGGCTGAAACGTCTTGTTTAGAGAGAGCACAAAAAACCTTTCCTGATCAG GCTCTGAAAGGAGTATTCGC
Downstream 100 bases:
>100_bases GGCGCGCGGCCGACGCCGTCAGGGCTTGACCTTGCGGCGCATCACGCCGTTGATCACCACGACCACCACTGCCACGCCGA TGGCGATGTACTGGAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MYNPPLPSEGSQTLQGAPMGSHVDVFGQRIERHGNERIRLLLKSFGLRTSLIRLKVIDTLLVAAEDDRRLGVRGVHSQLL DLDIPLSFLSVREVLKRLCAEGVITFNDDKSYSLHPQAAAVLNHD
Sequences:
>Translated_125_residues MYNPPLPSEGSQTLQGAPMGSHVDVFGQRIERHGNERIRLLLKSFGLRTSLIRLKVIDTLLVAAEDDRRLGVRGVHSQLL DLDIPLSFLSVREVLKRLCAEGVITFNDDKSYSLHPQAAAVLNHD >Mature_125_residues MYNPPLPSEGSQTLQGAPMGSHVDVFGQRIERHGNERIRLLLKSFGLRTSLIRLKVIDTLLVAAEDDRRLGVRGVHSQLL DLDIPLSFLSVREVLKRLCAEGVITFNDDKSYSLHPQAAAVLNHD
Specific function: Unknown
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13925; Mature: 13925
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNPPLPSEGSQTLQGAPMGSHVDVFGQRIERHGNERIRLLLKSFGLRTSLIRLKVIDTL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH LVAAEDDRRLGVRGVHSQLLDLDIPLSFLSVREVLKRLCAEGVITFNDDKSYSLHPQAAA HHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHH VLNHD HCCCC >Mature Secondary Structure MYNPPLPSEGSQTLQGAPMGSHVDVFGQRIERHGNERIRLLLKSFGLRTSLIRLKVIDTL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH LVAAEDDRRLGVRGVHSQLLDLDIPLSFLSVREVLKRLCAEGVITFNDDKSYSLHPQAAA HHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCEEECCHHHH VLNHD HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA