| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecR [C]
Identifier: 77458789
GI number: 77458789
Start: 2938381
End: 2939382
Strand: Reverse
Name: fecR [C]
Synonym: Pfl01_2564
Alternate gene names: 77458789
Gene position: 2939382-2938381 (Counterclockwise)
Preceding gene: 77458791
Following gene: 77458787
Centisome position: 45.65
GC content: 61.78
Gene sequence:
>1002_bases ATGACCCAGAACACCCTCTCGGAAGCCGAATACGATGCGATCACCGATGCCGCCGCGCATTGGTGCATGCGTCTGCATGC CGTCGACTGCACTGCTGAAGAGCGCCAGGCGTTCGAACAATGGCGTGATGCGCACCCGCTTCACGCGTTCGAGTATGAGG CCATGCTGGAAATCTGGGAGGTGGCTGAGCACTTGCCGCGCCCGGAACCCGCGCCGGTCGTGCCGATTCGCCAACCCGCC AGCTCATGGCGCCGGTACGCAGTGGCGGCTTCGGTCTGTGCCCTGGCATTGCCGCTGGCCGCCTGGGCCGGATGGAACCT CGGCTGGCTCCCCAACAGCTATCAGCATTTTGCAGCGACCGACAATGTCCGCCATGTCACGCTGGGCGATGGCAGTCAGG TCGAGCTGAACCTCAACACCGAGCTGACCTACAGCAATTACAAGGACGAGCGTCGCGTCACGCTGAAAAAGGGTGAGGCG TTCTTCGAAGTCAGCCATGACCTTGGCCACCCCTTCATCGTCAGGGCGGCCGAAGGCAGGATTCGCGTCACCGGCACGCG CTTCAACGTCTGGATGTATGAGGACCAGGTCAAGGTGAACCTGATTGAGGGCTCCGTGCTGGTCACCAGCAACGCCCGCC TGAGCGGCGACGGCTTGCGCCTGGGCCCCTCGATGCAGGCTCGCTACAAGCACGGCGACGACATGCCGCAAATCAGTCAG ACCTACGCCAACGACCATTCGCTGGCCTGGCGCAGCGGCAGACTGGTGCTCGACAACCTGTCGCTGAACGAAGCGTTGCC GCAGATCAACCGCTATCTGGACAAACCCCTGATGCTCGCCGACAACTCGACCGGCTCGATCCGGATTGGCGGGATCTACA ACATCAAGGAACTGAACAGCTTCGCCAGTACCCTGCCCAAAGTCTTGCCGGTCTTCCTGACCCGCAACAAGGACGGCAAC CCGATCATCAATCCGATGCCGCAACAGCCGCCAAAAAACTGA
Upstream 100 bases:
>100_bases CTGCGCGCAAAAAAGTTCCACGTTTTGATGGGTAAATGCCATGACGATGTTCTCGGCACCTTCCCCCAAAGGTTAGAATG CGGGAAATCAGGATGAGTCA
Downstream 100 bases:
>100_bases AGGCCGTTCCCGTGAGGGAGCGGCCTTCTGCTTTAGCGGTTGTAGACGGGTTGAACAGCTGATTACTGCGCCGCCACTTT CCCCGTTTTTTCCAGATCAT
Product: putative FecR
Products: NA
Alternate protein names: Transmembrane Sensor; Sigma Factor Regulatory Protein FecR/PupR Family; FecR Protein; FecR Family Protein; Fe2+-Dicitrate Sensor Membrane Component; Anti-Sigma Factor; Anti-Feci Sigma Factor Fecr; FecR Iron Siderophore Sensor Protein; Transcriptional Regulator; Regulatory Protein; Transmembrane Sensor Protein; Anti-Sigma Factor Protein FecR Family; FecR-Like Transmembrane Sensor; Ferric Citrate Sensor FecR; Inner Membrane Sensor For Iron Transport; Iron Transport-Sensory Transduction Protein; Two-Component System Sensor Protein; FecR-Like Transmembrane Sensor Fe2+-Dicitrate Sensor; Anti-Sigma Factor FecR Family; Anti-FecI Sigma Factor; Cytochrome C Oxidase Cbb3-Type Subunit I; CytoChrome C Oxidase Cbb3-Type Subunit I; FecR Protein Superfamily Protein; Anti-Sigma Factor FecR-Like Protein; Iron Siderophore Sensor Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Protein FecR; Inner Membrane Sensor Protein; FecR Family Transmembrane Sensor Protein; Two Component Sensor Kinase; Fe2+-Dicitrate Sensor Membrane Protein; FecR Family; IRON Transport Regulator Transmembrane Protein; Iron Acquisition-Like Protein; Iron Transporter-Like Protein; IRON Transport-Sensory Transduction Transmembrane Protein; Iron-Dicitrate Sensor Membrane Component; Iron Transport Regulator Protein/ Sensor Kinase; Regulator Of Iron Dicitrate Transport; Transcriptional Regulator Putative; Transmembrane Sensor/Regulatory Protein; Iron Sensor; FecR Iron Sensor Protein; Iron Uptake Transcriptional Regulator Protein; FecR-Like Transcriptional Regulator; Iron Dicitrate Transmembrane Sensor FecR
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTQNTLSEAEYDAITDAAAHWCMRLHAVDCTAEERQAFEQWRDAHPLHAFEYEAMLEIWEVAEHLPRPEPAPVVPIRQPA SSWRRYAVAASVCALALPLAAWAGWNLGWLPNSYQHFAATDNVRHVTLGDGSQVELNLNTELTYSNYKDERRVTLKKGEA FFEVSHDLGHPFIVRAAEGRIRVTGTRFNVWMYEDQVKVNLIEGSVLVTSNARLSGDGLRLGPSMQARYKHGDDMPQISQ TYANDHSLAWRSGRLVLDNLSLNEALPQINRYLDKPLMLADNSTGSIRIGGIYNIKELNSFASTLPKVLPVFLTRNKDGN PIINPMPQQPPKN
Sequences:
>Translated_333_residues MTQNTLSEAEYDAITDAAAHWCMRLHAVDCTAEERQAFEQWRDAHPLHAFEYEAMLEIWEVAEHLPRPEPAPVVPIRQPA SSWRRYAVAASVCALALPLAAWAGWNLGWLPNSYQHFAATDNVRHVTLGDGSQVELNLNTELTYSNYKDERRVTLKKGEA FFEVSHDLGHPFIVRAAEGRIRVTGTRFNVWMYEDQVKVNLIEGSVLVTSNARLSGDGLRLGPSMQARYKHGDDMPQISQ TYANDHSLAWRSGRLVLDNLSLNEALPQINRYLDKPLMLADNSTGSIRIGGIYNIKELNSFASTLPKVLPVFLTRNKDGN PIINPMPQQPPKN >Mature_332_residues TQNTLSEAEYDAITDAAAHWCMRLHAVDCTAEERQAFEQWRDAHPLHAFEYEAMLEIWEVAEHLPRPEPAPVVPIRQPAS SWRRYAVAASVCALALPLAAWAGWNLGWLPNSYQHFAATDNVRHVTLGDGSQVELNLNTELTYSNYKDERRVTLKKGEAF FEVSHDLGHPFIVRAAEGRIRVTGTRFNVWMYEDQVKVNLIEGSVLVTSNARLSGDGLRLGPSMQARYKHGDDMPQISQT YANDHSLAWRSGRLVLDNLSLNEALPQINRYLDKPLMLADNSTGSIRIGGIYNIKELNSFASTLPKVLPVFLTRNKDGNP IINPMPQQPPKN
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37485; Mature: 37354
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNTLSEAEYDAITDAAAHWCMRLHAVDCTAEERQAFEQWRDAHPLHAFEYEAMLEIWE CCCCCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VAEHLPRPEPAPVVPIRQPASSWRRYAVAASVCALALPLAAWAGWNLGWLPNSYQHFAAT HHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECC DNVRHVTLGDGSQVELNLNTELTYSNYKDERRVTLKKGEAFFEVSHDLGHPFIVRAAEGR CCEEEEEECCCCEEEEEECEEEEECCCCCCCEEEEECCCEEEEEHHHCCCCEEEEECCCE IRVTGTRFNVWMYEDQVKVNLIEGSVLVTSNARLSGDGLRLGPSMQARYKHGDDMPQISQ EEEEEEEEEEEEEECCEEEEEEECEEEEEECCEECCCCEEECCCCHHHCCCCCCCCHHHH TYANDHSLAWRSGRLVLDNLSLNEALPQINRYLDKPLMLADNSTGSIRIGGIYNIKELNS HHCCCCCEEEECCCEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEEECCEECHHHHHH FASTLPKVLPVFLTRNKDGNPIINPMPQQPPKN HHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQNTLSEAEYDAITDAAAHWCMRLHAVDCTAEERQAFEQWRDAHPLHAFEYEAMLEIWE CCCCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VAEHLPRPEPAPVVPIRQPASSWRRYAVAASVCALALPLAAWAGWNLGWLPNSYQHFAAT HHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECC DNVRHVTLGDGSQVELNLNTELTYSNYKDERRVTLKKGEAFFEVSHDLGHPFIVRAAEGR CCEEEEEECCCCEEEEEECEEEEECCCCCCCEEEEECCCEEEEEHHHCCCCEEEEECCCE IRVTGTRFNVWMYEDQVKVNLIEGSVLVTSNARLSGDGLRLGPSMQARYKHGDDMPQISQ EEEEEEEEEEEEEECCEEEEEEECEEEEEECCEECCCCEEECCCCHHHCCCCCCCCHHHH TYANDHSLAWRSGRLVLDNLSLNEALPQINRYLDKPLMLADNSTGSIRIGGIYNIKELNS HHCCCCCEEEECCCEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEEECCEECHHHHHH FASTLPKVLPVFLTRNKDGNPIINPMPQQPPKN HHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA