Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ycdJ [C]

Identifier: 77458776

GI number: 77458776

Start: 2922381

End: 2923406

Strand: Reverse

Name: ycdJ [C]

Synonym: Pfl01_2551

Alternate gene names: 77458776

Gene position: 2923406-2922381 (Counterclockwise)

Preceding gene: 77458777

Following gene: 77458775

Centisome position: 45.41

GC content: 61.11

Gene sequence:

>1026_bases
ATGTCTGTATCGCTGACCCGCTGGCTGCCCGGCCTGCTGATGACCGCCGCCCTGCCCCTGCTCGCACACGCCGAAGGCCC
GCAATACGGCCCGGAACTGCAAGGTTTCGAGTATCCCTACACCCTCAAGCACTTTGCCTTTCAGTCCCAGGGCAAGTCGC
TGCAGATGGGTTACATGGACGTCGCCGCCCACGGCAAGGCCAACGGGCGCACCGTGGTGCTGATGCACGGCAAGAATTTT
TGCGGCGCGACCTGGGACAGTTCGATCAAGGCCCTGAGCGAAGCCGGTTACCGGGTGGTCGCCCCGGATCAGATCGGTTT
CTGTACTTCCAGCAAACCCGATCACTACCAGTACACCTTCCAGCAACTGGCGGCCAACACCCAGCAGTTGCTCAAGGCGC
TGGGCATCCAGAAGGCCACCCTGCTCGGTCATTCCACCGGCGGCATGCTCGCCACCCGTTATGCGCTGCAATACCCGGAT
CAGGTCGAGCAACTGGCGCTGGTCAACCCGATCGGCCTGGAAGACTGGAAAGCCCTCGGCGTGCCGTACCGTAGCGTCGA
TCAGTGGTATCAGCGCGAATTGAAAGTCACCGCCCAAGGCATTCGCGACTATGAACGCACGACCTATTACGACGGCCGCT
GGAAACCGGAATTCGACCGCTGGGTCGACATGCTCGCCGGCCTCAGCAACGGCCCGGGCAAGACTCAGGTCGCATGGAAC
TCGGCGCTGATCTACGACATGATCTTCACCCAGCCGGTGTACTACGAGTTCAAGGACCTGAAGATGCCGACACTGCTGCT
GATCGGCACCTCCGACACCACCGCCATCGGCAAGGACATCGCCCCGCCCGAAGTGAAAGCCAAAATCGGTCACTACGAAG
TGCTCGGCAAGCAGGTGGCGAAACTGATTCCTCAGTCCACGCTGGTGGAATTCCCCGGCATGGGCCACGCCCCGCAGATG
GAAGAACCGGCGAAATTCCACGAAGCACTGCTGGGCTGGCTGGAAAAAACCAATCCCGTTCGTTGA

Upstream 100 bases:

>100_bases
GGCTGGCTCGGTTGAACGATCGGGCCCAAGGATTGCCTGTGTTTAACGTCGCCCTAATCCGGCCGTTCCAGCATCGGCCG
ATTTCTTGTGGAGTTGTCCT

Downstream 100 bases:

>100_bases
AGAGGTAACGCTGATGGCGGTGCAGATTGCGGTGATCGATGACTGGCAGGACGTCGCGCGGGGCGCAGTCGACTGGTCGG
TGCTCGACAGTCTCGGCGAA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Chloride peroxidase [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSVSLTRWLPGLLMTAALPLLAHAEGPQYGPELQGFEYPYTLKHFAFQSQGKSLQMGYMDVAAHGKANGRTVVLMHGKNF
CGATWDSSIKALSEAGYRVVAPDQIGFCTSSKPDHYQYTFQQLAANTQQLLKALGIQKATLLGHSTGGMLATRYALQYPD
QVEQLALVNPIGLEDWKALGVPYRSVDQWYQRELKVTAQGIRDYERTTYYDGRWKPEFDRWVDMLAGLSNGPGKTQVAWN
SALIYDMIFTQPVYYEFKDLKMPTLLLIGTSDTTAIGKDIAPPEVKAKIGHYEVLGKQVAKLIPQSTLVEFPGMGHAPQM
EEPAKFHEALLGWLEKTNPVR

Sequences:

>Translated_341_residues
MSVSLTRWLPGLLMTAALPLLAHAEGPQYGPELQGFEYPYTLKHFAFQSQGKSLQMGYMDVAAHGKANGRTVVLMHGKNF
CGATWDSSIKALSEAGYRVVAPDQIGFCTSSKPDHYQYTFQQLAANTQQLLKALGIQKATLLGHSTGGMLATRYALQYPD
QVEQLALVNPIGLEDWKALGVPYRSVDQWYQRELKVTAQGIRDYERTTYYDGRWKPEFDRWVDMLAGLSNGPGKTQVAWN
SALIYDMIFTQPVYYEFKDLKMPTLLLIGTSDTTAIGKDIAPPEVKAKIGHYEVLGKQVAKLIPQSTLVEFPGMGHAPQM
EEPAKFHEALLGWLEKTNPVR
>Mature_340_residues
SVSLTRWLPGLLMTAALPLLAHAEGPQYGPELQGFEYPYTLKHFAFQSQGKSLQMGYMDVAAHGKANGRTVVLMHGKNFC
GATWDSSIKALSEAGYRVVAPDQIGFCTSSKPDHYQYTFQQLAANTQQLLKALGIQKATLLGHSTGGMLATRYALQYPDQ
VEQLALVNPIGLEDWKALGVPYRSVDQWYQRELKVTAQGIRDYERTTYYDGRWKPEFDRWVDMLAGLSNGPGKTQVAWNS
ALIYDMIFTQPVYYEFKDLKMPTLLLIGTSDTTAIGKDIAPPEVKAKIGHYEVLGKQVAKLIPQSTLVEFPGMGHAPQME
EPAKFHEALLGWLEKTNPVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]

Homologues:

Organism=Homo sapiens, GI27597073, Length=103, Percent_Identity=37.8640776699029, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =1.11.1.10 [H]

Molecular weight: Translated: 38051; Mature: 37920

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSLTRWLPGLLMTAALPLLAHAEGPQYGPELQGFEYPYTLKHFAFQSQGKSLQMGYMD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCEE
VAAHGKANGRTVVLMHGKNFCGATWDSSIKALSEAGYRVVAPDQIGFCTSSKPDHYQYTF
HCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHH
QQLAANTQQLLKALGIQKATLLGHSTGGMLATRYALQYPDQVEQLALVNPIGLEDWKALG
HHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHC
VPYRSVDQWYQRELKVTAQGIRDYERTTYYDGRWKPEFDRWVDMLAGLSNGPGKTQVAWN
CCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEC
SALIYDMIFTQPVYYEFKDLKMPTLLLIGTSDTTAIGKDIAPPEVKAKIGHYEVLGKQVA
HHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCHHCCCCCCCCHHHHHCCHHHHHHHHHH
KLIPQSTLVEFPGMGHAPQMEEPAKFHEALLGWLEKTNPVR
HHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVSLTRWLPGLLMTAALPLLAHAEGPQYGPELQGFEYPYTLKHFAFQSQGKSLQMGYMD
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCEE
VAAHGKANGRTVVLMHGKNFCGATWDSSIKALSEAGYRVVAPDQIGFCTSSKPDHYQYTF
HCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHH
QQLAANTQQLLKALGIQKATLLGHSTGGMLATRYALQYPDQVEQLALVNPIGLEDWKALG
HHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHC
VPYRSVDQWYQRELKVTAQGIRDYERTTYYDGRWKPEFDRWVDMLAGLSNGPGKTQVAWN
CCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEC
SALIYDMIFTQPVYYEFKDLKMPTLLLIGTSDTTAIGKDIAPPEVKAKIGHYEVLGKQVA
HHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCHHCCCCCCCCHHHHHCCHHHHHHHHHH
KLIPQSTLVEFPGMGHAPQMEEPAKFHEALLGWLEKTNPVR
HHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]