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The map label for this gene is glxA [H]

Identifier: 77458678

GI number: 77458678

Start: 2806628

End: 2807647

Strand: Reverse

Name: glxA [H]

Synonym: Pfl01_2453

Alternate gene names: 77458678

Gene position: 2807647-2806628 (Counterclockwise)

Preceding gene: 77458680

Following gene: 77458677

Centisome position: 43.61

GC content: 63.24

Gene sequence:

>1020_bases
ATGAACTCTATTTTTCACCAACCCGACCCTCTCACCTGCTTGCTCGCGCAACCGCGCACGCTGGTGTTCCTGGCGTATCC
GCAGATGGGCTTGCTGGACCTGACCGGCGCACAAACCGTGTTCTGGGCCGCGTCCAAGGCCATGGCCGAACGCGGCTTGC
CTGGCTACGCGTTGCACACCGCCAGCCTGGACGGCGGATTGATCGCCACCGCCGAAGGGCTGTCGGTCAACACCTTGGCC
CTGCGCACCTTTGACGAGACAACCATCGATACGCTGATCGTGCCCGGTGCGCCGAACATCCGTCAGGCCATGCTCGACAA
TGTTGCGTTGGTCGACTGGCTGCGCGCGGCGTCAGCCAAGGCCAGACGCACCGCCTCGGTGTGCAGCGGCACCTTTCTGC
TGGCCCAGGCCGGGCTGCTGGAAGGCTTGCGCGCAACCACCCACTGGGGCATGTGCGACATGCTCAAGGGTGGTTTTCCG
AGTGTCGATGTCGACCTTGATGCGATCTACATCCAGCAAGGCAACGTCTGGACTTCCGCCGGGGTCACCACCGGAATCGA
CATGGCGCTAGCGCTGGTCGAGGCCGATTGCGGCCGCGCCGTGGCGTTGAAGGTGGCGCGTGAGCTGGTGGTTTTTCTCA
AACGCCCTGGCGGTCAGGCGCAGTTCAGCCAGTTGCTGCAAGCGCAGATCGACGACAGAGGCTGCTTCGAAGAATTGCAC
CTGTGGATCAGCGAAAACCTCGGCGACCCGCAATTGAGCGTCGAATCGCTGGCCCGACAGGCGCAAATGAGCCCGCGCAA
TTTCGCGCGGGTCTACAAACGCAAGATCGGCCGCACGCCGGCCAAGGCACTCGAGCTGTTTCGCCTGGAAGCAGCGCGAC
GAATGCTCGAAGACTCTCAGCGCAACATCGACCAGATCGCGCAGTTGTGCGGGTTTGGCGACGAAGAACGCATGCGCGAC
ACCTTCTACCGTCACCTCTCGGTCTCGCCCCGGGAATACCGCAGCCGGTTCTCGCGCTGA

Upstream 100 bases:

>100_bases
GGCCCATACCAATGTATATTCGCGCTCCTGCCCGCAAACACCGAAACTACGGCGCACCGGATCGCCGAAAAGCGGGCGAT
CATCAGGTCCCTGAGCAGTC

Downstream 100 bases:

>100_bases
CGCCACACAGCGCAATGGCACCGGGCTCGCAGACGTTCAAATACTGTCGCTATACACACGTATAAGTACGCCGCCGAACC
GAGCGGCGTATCGTGCGGCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNSIFHQPDPLTCLLAQPRTLVFLAYPQMGLLDLTGAQTVFWAASKAMAERGLPGYALHTASLDGGLIATAEGLSVNTLA
LRTFDETTIDTLIVPGAPNIRQAMLDNVALVDWLRAASAKARRTASVCSGTFLLAQAGLLEGLRATTHWGMCDMLKGGFP
SVDVDLDAIYIQQGNVWTSAGVTTGIDMALALVEADCGRAVALKVARELVVFLKRPGGQAQFSQLLQAQIDDRGCFEELH
LWISENLGDPQLSVESLARQAQMSPRNFARVYKRKIGRTPAKALELFRLEAARRMLEDSQRNIDQIAQLCGFGDEERMRD
TFYRHLSVSPREYRSRFSR

Sequences:

>Translated_339_residues
MNSIFHQPDPLTCLLAQPRTLVFLAYPQMGLLDLTGAQTVFWAASKAMAERGLPGYALHTASLDGGLIATAEGLSVNTLA
LRTFDETTIDTLIVPGAPNIRQAMLDNVALVDWLRAASAKARRTASVCSGTFLLAQAGLLEGLRATTHWGMCDMLKGGFP
SVDVDLDAIYIQQGNVWTSAGVTTGIDMALALVEADCGRAVALKVARELVVFLKRPGGQAQFSQLLQAQIDDRGCFEELH
LWISENLGDPQLSVESLARQAQMSPRNFARVYKRKIGRTPAKALELFRLEAARRMLEDSQRNIDQIAQLCGFGDEERMRD
TFYRHLSVSPREYRSRFSR
>Mature_339_residues
MNSIFHQPDPLTCLLAQPRTLVFLAYPQMGLLDLTGAQTVFWAASKAMAERGLPGYALHTASLDGGLIATAEGLSVNTLA
LRTFDETTIDTLIVPGAPNIRQAMLDNVALVDWLRAASAKARRTASVCSGTFLLAQAGLLEGLRATTHWGMCDMLKGGFP
SVDVDLDAIYIQQGNVWTSAGVTTGIDMALALVEADCGRAVALKVARELVVFLKRPGGQAQFSQLLQAQIDDRGCFEELH
LWISENLGDPQLSVESLARQAQMSPRNFARVYKRKIGRTPAKALELFRLEAARRMLEDSQRNIDQIAQLCGFGDEERMRD
TFYRHLSVSPREYRSRFSR

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37332; Mature: 37332

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIFHQPDPLTCLLAQPRTLVFLAYPQMGLLDLTGAQTVFWAASKAMAERGLPGYALHT
CCCCCCCCCCCEEEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEEE
ASLDGGLIATAEGLSVNTLALRTFDETTIDTLIVPGAPNIRQAMLDNVALVDWLRAASAK
ECCCCCEEEEECCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
ARRTASVCSGTFLLAQAGLLEGLRATTHWGMCDMLKGGFPSVDVDLDAIYIQQGNVWTSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEECCCEEECC
GVTTGIDMALALVEADCGRAVALKVARELVVFLKRPGGQAQFSQLLQAQIDDRGCFEELH
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH
LWISENLGDPQLSVESLARQAQMSPRNFARVYKRKIGRTPAKALELFRLEAARRMLEDSQ
HHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RNIDQIAQLCGFGDEERMRDTFYRHLSVSPREYRSRFSR
CCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MNSIFHQPDPLTCLLAQPRTLVFLAYPQMGLLDLTGAQTVFWAASKAMAERGLPGYALHT
CCCCCCCCCCCEEEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEEE
ASLDGGLIATAEGLSVNTLALRTFDETTIDTLIVPGAPNIRQAMLDNVALVDWLRAASAK
ECCCCCEEEEECCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
ARRTASVCSGTFLLAQAGLLEGLRATTHWGMCDMLKGGFPSVDVDLDAIYIQQGNVWTSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEECCCEEECC
GVTTGIDMALALVEADCGRAVALKVARELVVFLKRPGGQAQFSQLLQAQIDDRGCFEELH
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH
LWISENLGDPQLSVESLARQAQMSPRNFARVYKRKIGRTPAKALELFRLEAARRMLEDSQ
HHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RNIDQIAQLCGFGDEERMRDTFYRHLSVSPREYRSRFSR
CCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]