| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fixJ [H]
Identifier: 77458677
GI number: 77458677
Start: 2806105
End: 2806527
Strand: Reverse
Name: fixJ [H]
Synonym: Pfl01_2452
Alternate gene names: 77458677
Gene position: 2806527-2806105 (Counterclockwise)
Preceding gene: 77458678
Following gene: 77458676
Centisome position: 43.59
GC content: 61.94
Gene sequence:
>423_bases ATGGCGGGCGTCCTCGACGGGCTACCCGAGATCAGCCCTGGTAAAGCAATGTCCCACACCGCTGTTGTATCGGTTGTCGA TGATGATGAGTCCGTGCGCATGGCGCTGGACAGCCTGTTGCGCTCGCACGGCTACACCGTGCAGTTGTACCCGAACGCGG AGGCTTTTCTGGCGATGAAGGCGCCGCCCCGCCCCGGCTGCATCATCTCGGACATCCAGATGCCCGGTCTGTCCGGCATC GAGATGTACGATGAGCTGTGCGCCCGAGGCGTGCGCATCCCGATCATTTTCATCACGGGTTACCAGGGGCGTCCGCCAAG GGTCAACGCCGCATTCCCCGAGCCCCTCGCCTATTTCCCTAAACCCTTCCCGTGCGGCGAACTCATCACCTGCATCGAAA GCGCATTCAATCGCGCCGTTTGA
Upstream 100 bases:
>100_bases CGCCACACAGCGCAATGGCACCGGGCTCGCAGACGTTCAAATACTGTCGCTATACACACGTATAAGTACGCCGCCGAACC GAGCGGCGTATCGTGCGGCA
Downstream 100 bases:
>100_bases CGGCCCTCTTTCTATACCTGTGTATACCCCACCCCATACCTAAGCATGTCGGCACTGACCCTATGTAGAAGTGTCTCGCC GCACCTTCCCCGATAGCATC
Product: response regulator receiver domain-containing protein
Products: NADP; 2 glutathione [C]
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAGVLDGLPEISPGKAMSHTAVVSVVDDDESVRMALDSLLRSHGYTVQLYPNAEAFLAMKAPPRPGCIISDIQMPGLSGI EMYDELCARGVRIPIIFITGYQGRPPRVNAAFPEPLAYFPKPFPCGELITCIESAFNRAV
Sequences:
>Translated_140_residues MAGVLDGLPEISPGKAMSHTAVVSVVDDDESVRMALDSLLRSHGYTVQLYPNAEAFLAMKAPPRPGCIISDIQMPGLSGI EMYDELCARGVRIPIIFITGYQGRPPRVNAAFPEPLAYFPKPFPCGELITCIESAFNRAV >Mature_139_residues AGVLDGLPEISPGKAMSHTAVVSVVDDDESVRMALDSLLRSHGYTVQLYPNAEAFLAMKAPPRPGCIISDIQMPGLSGIE MYDELCARGVRIPIIFITGYQGRPPRVNAAFPEPLAYFPKPFPCGELITCIESAFNRAV
Specific function: FixJ, when activated by fixL, induces the expression of both nifA, required for activation of classical nif and fix genes, and fixK, required for fixN activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790299, Length=117, Percent_Identity=31.6239316239316, Blast_Score=71, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 15139; Mature: 15008
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVLDGLPEISPGKAMSHTAVVSVVDDDESVRMALDSLLRSHGYTVQLYPNAEAFLAMK CCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC APPRPGCIISDIQMPGLSGIEMYDELCARGVRIPIIFITGYQGRPPRVNAAFPEPLAYFP CCCCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHCC KPFPCGELITCIESAFNRAV CCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AGVLDGLPEISPGKAMSHTAVVSVVDDDESVRMALDSLLRSHGYTVQLYPNAEAFLAMK CCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC APPRPGCIISDIQMPGLSGIEMYDELCARGVRIPIIFITGYQGRPPRVNAAFPEPLAYFP CCCCCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHCC KPFPCGELITCIESAFNRAV CCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH2; oxidized glutathione [C]
Specific reaction: NADPH2 + oxidized glutathione = NADP + 2 glutathione [C]
General reaction: Oxidoreductases; Acting on NADH or NADPH; With a disulfide as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2046550 [H]