| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is yveA [H]
Identifier: 77458536
GI number: 77458536
Start: 2663009
End: 2664640
Strand: Reverse
Name: yveA [H]
Synonym: Pfl01_2309
Alternate gene names: 77458536
Gene position: 2664640-2663009 (Counterclockwise)
Preceding gene: 77458539
Following gene: 77458535
Centisome position: 41.39
GC content: 62.81
Gene sequence:
>1632_bases ATGTCAGGCCAAGGCAAGTTCAAAAAACAACTTTCATTGATCGACCTCACCTTTATCGGACTGGGGGCGATCTTCGGTTC CGGCTGGTTGTTCGCGGCCAGTCACGTGTCGGCGATAGCCGGGCCGGCGGGGATTTTTTCCTGGTTGCTGGGCGGGTTCG CCGTGTTGCTGCTGGGCATCGTCTACTGCGAGCTGGGCGCGGCATTGCCAAGGGCCGGCGGCGTGGTGCGTTACCCGGTT TACAGCCACGGGCCGCTGCTCGGTTACTTGATGGGTTTCATCACGCTGATCGCGTTTTCCAGTCTGGTGGCGATTGAGGT GGTTGCCTCTCGCCAATACGCGGCGGCCTGGTTTCCGAGCCTGACCAAGGCCGGCAGCGGTGATCCGACCCTGCTCGGCT GGCTGGTGCAGTTCGGCCTGCTGTGCGTGTTCTTCCTGCTCAACTACCGCAGCGTGAAGACCTTCGCCAAGGCCAACAAT CTGGTCAGCGTTTTCAAATTCATCGTGCCGCTGCTGGTGATCGGCGTGCTGTTCACCTTCTTCAAACCGGAAAACTTTCA GATCCAAGGCTTCGCCCCTTTCGGACTCTCGGGCATCGAGATGGCCGTCTCTGCCGGCGGCGTGATCTTCGCCTACCTCG GCCTGACCCCGATCATCTCGGTGGCCAGCGAAGTGAAGAACCCGCAACGCACCATCCCGATTGCGCTGATCCTGTCGGTG CTGCTTTCCACTGCGATCTACGTGTTGCTGCAAACCGCCTTCCTCGGCGGCATTCCGACCGAATTGCTCGCCAATGGCTG GGCCGGGGTTTCCAAGGAATTCGCCCTGCCGTACCGCGACATCGCCCTGGCGCTGGGCGTGGGCTGGCTGGCGTATCTGG TGGTCGCCGACGCGGTAATCTCCCCCAGCGGCTGCGGCAACATCTACATGAACGCTACGCCTCGAGTGATCTACGGCTGG GCGCAGACCGGCACCTTCTTCAAGGTCTTCACCCACATCGACGCGAAGTCCGGCATCCCGCGTCCGGCACTGTGGCTGAC CTTCGCCCTGTCGGTGTTCTGGACCCTGCCGTTCCCATCGTGGGAAGCGTTGATCAACGTGGTGTCCGCCGCGCTGGTAC TGAGCTACGCCGTCGCTCCAGTGACCGTCGCCGCGCTGCGTCGCAATGCCCCCGACATGCCGCGCCCGTTCCGGGTCAAG TGCATGGGCGTGCTGGGGCCGGTGTCGTTCATCATCGCTGCGCTGATCGTTTACTGGTCGGGCTGGAACACCGTGTCCTG GCTGCTCGGCCTGCAAATCCTGATGTTCGTCGTCTACCTGCTTTGCGGCCGCTTCGTGCCGACCGCTCAGCTCAGCCTGT CCCGCCAAGTGCGCTCGTCGGCGTGGCTGATCGCCTTCTACGCCGTGACCATCGTCCTGTCGAAACTTGGCACCTTCGGC GGTCTGGGCATCCTCACCCATCCATTCGACACCCTGGTCGTCGCAGCCTGTGCAATGGGCATTTATTACTGGGGCGCCGC TACCGGCGTACCGGCACACCTGCTGCGCCTGGAATCCGAAGAGGATGAAAGCGAAGTCGCTTCGCCGTCCCCCGCCTCCA CCGCCAATCCTCGCGCCGCCGGCGCTTACTGA
Upstream 100 bases:
>100_bases CTGCGCAAAACATCAATCGCCCGACGCCCGATGAGTTCACTGTTTAGCCGTTCCAGTGACTCACACCTGCCTATCCAATA ACTCACAAGAAGGCGATGCC
Downstream 100 bases:
>100_bases AATCACTTAACGGGACCTGTCCATGAAACGAGTACACGTCATTGATTCCCACACCGGCGGCGAGCCCACGCGTCTGGTGA TGAAAGGTTTTCCCGATCTG
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: L-aspartate transporter [H]
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MSGQGKFKKQLSLIDLTFIGLGAIFGSGWLFAASHVSAIAGPAGIFSWLLGGFAVLLLGIVYCELGAALPRAGGVVRYPV YSHGPLLGYLMGFITLIAFSSLVAIEVVASRQYAAAWFPSLTKAGSGDPTLLGWLVQFGLLCVFFLLNYRSVKTFAKANN LVSVFKFIVPLLVIGVLFTFFKPENFQIQGFAPFGLSGIEMAVSAGGVIFAYLGLTPIISVASEVKNPQRTIPIALILSV LLSTAIYVLLQTAFLGGIPTELLANGWAGVSKEFALPYRDIALALGVGWLAYLVVADAVISPSGCGNIYMNATPRVIYGW AQTGTFFKVFTHIDAKSGIPRPALWLTFALSVFWTLPFPSWEALINVVSAALVLSYAVAPVTVAALRRNAPDMPRPFRVK CMGVLGPVSFIIAALIVYWSGWNTVSWLLGLQILMFVVYLLCGRFVPTAQLSLSRQVRSSAWLIAFYAVTIVLSKLGTFG GLGILTHPFDTLVVAACAMGIYYWGAATGVPAHLLRLESEEDESEVASPSPASTANPRAAGAY
Sequences:
>Translated_543_residues MSGQGKFKKQLSLIDLTFIGLGAIFGSGWLFAASHVSAIAGPAGIFSWLLGGFAVLLLGIVYCELGAALPRAGGVVRYPV YSHGPLLGYLMGFITLIAFSSLVAIEVVASRQYAAAWFPSLTKAGSGDPTLLGWLVQFGLLCVFFLLNYRSVKTFAKANN LVSVFKFIVPLLVIGVLFTFFKPENFQIQGFAPFGLSGIEMAVSAGGVIFAYLGLTPIISVASEVKNPQRTIPIALILSV LLSTAIYVLLQTAFLGGIPTELLANGWAGVSKEFALPYRDIALALGVGWLAYLVVADAVISPSGCGNIYMNATPRVIYGW AQTGTFFKVFTHIDAKSGIPRPALWLTFALSVFWTLPFPSWEALINVVSAALVLSYAVAPVTVAALRRNAPDMPRPFRVK CMGVLGPVSFIIAALIVYWSGWNTVSWLLGLQILMFVVYLLCGRFVPTAQLSLSRQVRSSAWLIAFYAVTIVLSKLGTFG GLGILTHPFDTLVVAACAMGIYYWGAATGVPAHLLRLESEEDESEVASPSPASTANPRAAGAY >Mature_542_residues SGQGKFKKQLSLIDLTFIGLGAIFGSGWLFAASHVSAIAGPAGIFSWLLGGFAVLLLGIVYCELGAALPRAGGVVRYPVY SHGPLLGYLMGFITLIAFSSLVAIEVVASRQYAAAWFPSLTKAGSGDPTLLGWLVQFGLLCVFFLLNYRSVKTFAKANNL VSVFKFIVPLLVIGVLFTFFKPENFQIQGFAPFGLSGIEMAVSAGGVIFAYLGLTPIISVASEVKNPQRTIPIALILSVL LSTAIYVLLQTAFLGGIPTELLANGWAGVSKEFALPYRDIALALGVGWLAYLVVADAVISPSGCGNIYMNATPRVIYGWA QTGTFFKVFTHIDAKSGIPRPALWLTFALSVFWTLPFPSWEALINVVSAALVLSYAVAPVTVAALRRNAPDMPRPFRVKC MGVLGPVSFIIAALIVYWSGWNTVSWLLGLQILMFVVYLLCGRFVPTAQLSLSRQVRSSAWLIAFYAVTIVLSKLGTFGG LGILTHPFDTLVVAACAMGIYYWGAATGVPAHLLRLESEEDESEVASPSPASTANPRAAGAY
Specific function: Uptake of L-aspartate with the concomitant import of a proton. Can also transport aspartate hydroxamate and L-glutamate with lower affinity and efficiency [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]
Homologues:
Organism=Homo sapiens, GI110347453, Length=350, Percent_Identity=28, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI258614005, Length=447, Percent_Identity=24.8322147651007, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI258614003, Length=447, Percent_Identity=24.8322147651007, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI187423910, Length=403, Percent_Identity=25.8064516129032, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI7657591, Length=403, Percent_Identity=25.8064516129032, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI258645169, Length=447, Percent_Identity=23.2662192393736, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI33286428, Length=408, Percent_Identity=25, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI114326544, Length=432, Percent_Identity=24.3055555555556, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI114326550, Length=432, Percent_Identity=24.3055555555556, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI181337167, Length=401, Percent_Identity=22.9426433915212, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI115648063, Length=463, Percent_Identity=21.8142548596112, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI115648022, Length=463, Percent_Identity=21.8142548596112, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI186910308, Length=446, Percent_Identity=23.7668161434978, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI186910306, Length=446, Percent_Identity=23.7668161434978, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI186910304, Length=446, Percent_Identity=23.7668161434978, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI4507047, Length=208, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=8e-11, Organism=Homo sapiens, GI7657683, Length=359, Percent_Identity=25.0696378830084, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI87082250, Length=361, Percent_Identity=29.3628808864266, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1788480, Length=355, Percent_Identity=27.887323943662, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI2367353, Length=344, Percent_Identity=27.6162790697674, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786302, Length=413, Percent_Identity=23.4866828087167, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1790653, Length=360, Percent_Identity=22.5, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1786602, Length=440, Percent_Identity=22.9545454545455, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI87081708, Length=352, Percent_Identity=23.8636363636364, Blast_Score=66, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17532491, Length=405, Percent_Identity=26.6666666666667, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17531343, Length=411, Percent_Identity=26.2773722627737, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17540018, Length=411, Percent_Identity=25.7907542579075, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17533459, Length=408, Percent_Identity=25.9803921568627, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17568033, Length=411, Percent_Identity=26.2773722627737, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71995382, Length=423, Percent_Identity=25.0591016548463, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71995388, Length=368, Percent_Identity=25, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71990446, Length=353, Percent_Identity=25.2124645892351, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32566699, Length=315, Percent_Identity=24.7619047619048, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24667468, Length=411, Percent_Identity=25.0608272506083, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI45550968, Length=428, Percent_Identity=26.6355140186916, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI19921172, Length=428, Percent_Identity=26.6355140186916, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI221512776, Length=431, Percent_Identity=25.9860788863109, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24666159, Length=431, Percent_Identity=25.9860788863109, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI21357367, Length=409, Percent_Identity=25.1833740831296, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24668806, Length=427, Percent_Identity=23.1850117096019, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI21356285, Length=427, Percent_Identity=23.1850117096019, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24668802, Length=427, Percent_Identity=23.1850117096019, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24651635, Length=416, Percent_Identity=24.5192307692308, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24651633, Length=416, Percent_Identity=24.5192307692308, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI221331183, Length=406, Percent_Identity=25.8620689655172, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI17647653, Length=406, Percent_Identity=25.8620689655172, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24664379, Length=406, Percent_Identity=25.8620689655172, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI161077963, Length=395, Percent_Identity=24.0506329113924, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641993, Length=401, Percent_Identity=22.1945137157107, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24641995, Length=401, Percent_Identity=22.1945137157107, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 58024; Mature: 57893
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQGKFKKQLSLIDLTFIGLGAIFGSGWLFAASHVSAIAGPAGIFSWLLGGFAVLLLGI CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VYCELGAALPRAGGVVRYPVYSHGPLLGYLMGFITLIAFSSLVAIEVVASRQYAAAWFPS HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH LTKAGSGDPTLLGWLVQFGLLCVFFLLNYRSVKTFAKANNLVSVFKFIVPLLVIGVLFTF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKPENFQIQGFAPFGLSGIEMAVSAGGVIFAYLGLTPIISVASEVKNPQRTIPIALILSV CCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LLSTAIYVLLQTAFLGGIPTELLANGWAGVSKEFALPYRDIALALGVGWLAYLVVADAVI HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHC SPSGCGNIYMNATPRVIYGWAQTGTFFKVFTHIDAKSGIPRPALWLTFALSVFWTLPFPS CCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC WEALINVVSAALVLSYAVAPVTVAALRRNAPDMPRPFRVKCMGVLGPVSFIIAALIVYWS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHC GWNTVSWLLGLQILMFVVYLLCGRFVPTAQLSLSRQVRSSAWLIAFYAVTIVLSKLGTFG CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLGILTHPFDTLVVAACAMGIYYWGAATGVPAHLLRLESEEDESEVASPSPASTANPRAA CCCHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC GAY CCC >Mature Secondary Structure SGQGKFKKQLSLIDLTFIGLGAIFGSGWLFAASHVSAIAGPAGIFSWLLGGFAVLLLGI CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VYCELGAALPRAGGVVRYPVYSHGPLLGYLMGFITLIAFSSLVAIEVVASRQYAAAWFPS HHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH LTKAGSGDPTLLGWLVQFGLLCVFFLLNYRSVKTFAKANNLVSVFKFIVPLLVIGVLFTF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKPENFQIQGFAPFGLSGIEMAVSAGGVIFAYLGLTPIISVASEVKNPQRTIPIALILSV CCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LLSTAIYVLLQTAFLGGIPTELLANGWAGVSKEFALPYRDIALALGVGWLAYLVVADAVI HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHC SPSGCGNIYMNATPRVIYGWAQTGTFFKVFTHIDAKSGIPRPALWLTFALSVFWTLPFPS CCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC WEALINVVSAALVLSYAVAPVTVAALRRNAPDMPRPFRVKCMGVLGPVSFIIAALIVYWS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHC GWNTVSWLLGLQILMFVVYLLCGRFVPTAQLSLSRQVRSSAWLIAFYAVTIVLSKLGTFG CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLGILTHPFDTLVVAACAMGIYYWGAATGVPAHLLRLESEEDESEVASPSPASTANPRAA CCCHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC GAY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 12730183 [H]