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The map label for this gene is ycaC [H]

Identifier: 77458525

GI number: 77458525

Start: 2649709

End: 2650341

Strand: Direct

Name: ycaC [H]

Synonym: Pfl01_2298

Alternate gene names: 77458525

Gene position: 2649709-2650341 (Clockwise)

Preceding gene: 77458520

Following gene: 77458531

Centisome position: 41.15

GC content: 59.56

Gene sequence:

>633_bases
ATGAGCACTCCAACCTACAACCGCCTGAACAAAGACGACGCCGTAGTTCTGCTGGTCGACCACCAGACCGGTCTGATTTC
TCTGGTTCAGGACTTCTCGCCAAACGAGTTCAAGAATAACGTGCTGGCGCTGGCCGATCTGGCCAAATTCTTCGAATTGC
CGACCATCCTCACCACTAGCTTCGAACAAGGCCCGAACGGCCCGCTGGTGCCGGAACTCAAGGAAATGTTCCCGGACGCG
CCGTACATCGCCCGCCCAGGCCAGATCAACGCCTGGGACAACGAAGACTTCGTCAAGGCGATCAAGGCCACCGGCCGCAA
GCAGATCATCATTGCCGGGGTCGTGACCGATGTGTGTGTAGCGTTCCCGACCCTGTCGGCGCTGGCGGAAGGGTTTGACG
TGTTCGTGGTGACCGACGCTTCCGGCACCTTCAACACCACCGTGCAGCAAGCCGCGTGGAATCGCATGACCCAGGCCGGC
GCACAGATGATGAACTGGTTCTCGGTGGCCTGCGAACTGCACCGCGACTGGCGCAACGACATCGAAGGCCTGGGCAACCT
GCTGTCCCAGCGCATTCCGAACTACCGCAACTTGATGAACGGCTATGCCGCACTGACGGCGCATCAGAAATAA

Upstream 100 bases:

>100_bases
GTGAAACGCTTTTCAGACGATTTATCGCTTTCAGGCGAGTCAGTAATCTGTGCCCATCTTGAACGCAAACGCACTTCCAC
AACTAAAAAGGGATTCATAC

Downstream 100 bases:

>100_bases
CCGGATGCCGGATGGACGAAAGCCTGCTTTGAAAAAAGCAGGCTTTCGTCGTTTCTACCGCAAACAGCAGAGCAGGGGAC
TCATCACCTCAAACCATGAC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSTPTYNRLNKDDAVVLLVDHQTGLISLVQDFSPNEFKNNVLALADLAKFFELPTILTTSFEQGPNGPLVPELKEMFPDA
PYIARPGQINAWDNEDFVKAIKATGRKQIIIAGVVTDVCVAFPTLSALAEGFDVFVVTDASGTFNTTVQQAAWNRMTQAG
AQMMNWFSVACELHRDWRNDIEGLGNLLSQRIPNYRNLMNGYAALTAHQK

Sequences:

>Translated_210_residues
MSTPTYNRLNKDDAVVLLVDHQTGLISLVQDFSPNEFKNNVLALADLAKFFELPTILTTSFEQGPNGPLVPELKEMFPDA
PYIARPGQINAWDNEDFVKAIKATGRKQIIIAGVVTDVCVAFPTLSALAEGFDVFVVTDASGTFNTTVQQAAWNRMTQAG
AQMMNWFSVACELHRDWRNDIEGLGNLLSQRIPNYRNLMNGYAALTAHQK
>Mature_209_residues
STPTYNRLNKDDAVVLLVDHQTGLISLVQDFSPNEFKNNVLALADLAKFFELPTILTTSFEQGPNGPLVPELKEMFPDAP
YIARPGQINAWDNEDFVKAIKATGRKQIIIAGVVTDVCVAFPTLSALAEGFDVFVVTDASGTFNTTVQQAAWNRMTQAGA
QMMNWFSVACELHRDWRNDIEGLGNLLSQRIPNYRNLMNGYAALTAHQK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=207, Percent_Identity=74.3961352657005, Blast_Score=334, Evalue=3e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23266; Mature: 23134

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPTYNRLNKDDAVVLLVDHQTGLISLVQDFSPNEFKNNVLALADLAKFFELPTILTTS
CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHC
FEQGPNGPLVPELKEMFPDAPYIARPGQINAWDNEDFVKAIKATGRKQIIIAGVVTDVCV
CCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHH
AFPTLSALAEGFDVFVVTDASGTFNTTVQQAAWNRMTQAGAQMMNWFSVACELHRDWRND
HHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEGLGNLLSQRIPNYRNLMNGYAALTAHQK
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STPTYNRLNKDDAVVLLVDHQTGLISLVQDFSPNEFKNNVLALADLAKFFELPTILTTS
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHC
FEQGPNGPLVPELKEMFPDAPYIARPGQINAWDNEDFVKAIKATGRKQIIIAGVVTDVCV
CCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHH
AFPTLSALAEGFDVFVVTDASGTFNTTVQQAAWNRMTQAGAQMMNWFSVACELHRDWRND
HHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEGLGNLLSQRIPNYRNLMNGYAALTAHQK
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]