| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458481
Identifier: 77458481
GI number: 77458481
Start: 2587166
End: 2588500
Strand: Direct
Name: 77458481
Synonym: Pfl01_2254
Alternate gene names: NA
Gene position: 2587166-2588500 (Clockwise)
Preceding gene: 77458479
Following gene: 77458482
Centisome position: 40.18
GC content: 63.67
Gene sequence:
>1335_bases ATGGTTGCGCTTTCGTCCGGTCTTACCTGGCGCCATTGCCTGGCGTCATCCATCAGGGTCGGCGTGCTCGGCCTTGCCGT ACTCGCTGGCAGCAGCGGGGTCTGGGCCGCGGATCCGTCGCAAGCCATTCGCCCGTACACCATCCATGTGGACGAAGCGA AGCTGAGCGACCTGCGCAAACGCATCGCCGACACCCGCTGGCCGGACAAGGAAACGGTCGGCGACGTGTCCCAGGGAGTG CAACTGGCGCAGGTCCAGGCGTTGGTGAAGTATTGGGGCGACGGCTACGACTGGCGCAAGGCCGAAGCGAAGCTCAACGC GTTGCCGGAGTTCGTGACCACTATCGACGGCGTCGACATCCAGTTCATCCACGTGCGTTCGCGCAATCCCAACGCCATGC CGCTGATCCTTACTCATGGCTGGCCGGGTTCGCAGTTCGAATTCCTCAAGACCATCGGCCCGCTGACCGATCCCGTGGCG TACGGCGGCAAGGTCGAGGACTCGTTCGACGTGGTGATCCCGTCGATTCCCGGCCATGGTTTTTCCGGCAAACCGACCGA GCTCGGCTGGGGCCCTGACCGGGTCGCGAAGGCCTGGGATGTGTTGATGACACGCCTGGGTTACAGCCATTACGTGTCCC AGGGCGGCGATCATGGATCGGTGATATCCGATGCACTGGGTCGCCTGGCGCCGCCCGGTTTGCTGGGTATCCACCTGAAC ATGCCGGCCACCGTGCCGCCGGAACTGGTCAAGCCAATCAACAGCGGCGACCCGGCCCCGGCCGGGTTGACCGCACCGGA GGTGACGGCCTTCAACTCGCTGAGCCAGTTCTTCGGTCGTAACGCCGCCTATGGCGCAATGATGGTGACCCGTCCGCAAA CCATCGGCTATCTGCTGGCTGACTCGCCCGCCGGCACGGCAGCCTGGATGTACGAAAAATTTGCCGCGTGGACCGACAGC GACGGTCAGCCCGAGAAGGTCCTGAGTCGCGATGAAATGCTCGATGACATCAGCCTGTACTGGCTGACCGACAGCGGGGC GTCGTCCTCCCGTTTCTACTGGGAGAACAACAACAATAACTTCAGTGCCGCCGCGCAGAAGACTGCCGACATCAAGGTGC CGGTGGCGATCACCGTGTTCCCCCACGAAATCTACCGCGCGCCGAAAGTCTGGTCGCAGCGCGCCTATCCGTCGCTGGCT TACTTCAGCGAAGTCAGCAAGGGCGGGCACTTCGCGGCATGGGAGCAACCGCAACTGTTCAGCGAAGAACTGCGCGAAGC CTTCCGGCCACTGCGTGCGGCGGCGCAGAAAACCGCTGCGCAGGCAGCCCGCTAG
Upstream 100 bases:
>100_bases AGGTATCGACCGACACCATCGTGTAATCCCCCCGGTGCCAGCGCAGTGGTCTGATCCGATTGGCGATGCCTTTCGAATAA TGACTACAAGGAGATCCATC
Downstream 100 bases:
>100_bases ACCTGCAATCCGCAAGCCCTTTAACCCACAGCCCTTTAACCCCAAGCCCGGAACCGCCGCCCGGCGGTTCACGAGGGAGA CTCGGCATGACTGACTCTAA
Product: epoxide hydrolase-like protein
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MVALSSGLTWRHCLASSIRVGVLGLAVLAGSSGVWAADPSQAIRPYTIHVDEAKLSDLRKRIADTRWPDKETVGDVSQGV QLAQVQALVKYWGDGYDWRKAEAKLNALPEFVTTIDGVDIQFIHVRSRNPNAMPLILTHGWPGSQFEFLKTIGPLTDPVA YGGKVEDSFDVVIPSIPGHGFSGKPTELGWGPDRVAKAWDVLMTRLGYSHYVSQGGDHGSVISDALGRLAPPGLLGIHLN MPATVPPELVKPINSGDPAPAGLTAPEVTAFNSLSQFFGRNAAYGAMMVTRPQTIGYLLADSPAGTAAWMYEKFAAWTDS DGQPEKVLSRDEMLDDISLYWLTDSGASSSRFYWENNNNNFSAAAQKTADIKVPVAITVFPHEIYRAPKVWSQRAYPSLA YFSEVSKGGHFAAWEQPQLFSEELREAFRPLRAAAQKTAAQAAR
Sequences:
>Translated_444_residues MVALSSGLTWRHCLASSIRVGVLGLAVLAGSSGVWAADPSQAIRPYTIHVDEAKLSDLRKRIADTRWPDKETVGDVSQGV QLAQVQALVKYWGDGYDWRKAEAKLNALPEFVTTIDGVDIQFIHVRSRNPNAMPLILTHGWPGSQFEFLKTIGPLTDPVA YGGKVEDSFDVVIPSIPGHGFSGKPTELGWGPDRVAKAWDVLMTRLGYSHYVSQGGDHGSVISDALGRLAPPGLLGIHLN MPATVPPELVKPINSGDPAPAGLTAPEVTAFNSLSQFFGRNAAYGAMMVTRPQTIGYLLADSPAGTAAWMYEKFAAWTDS DGQPEKVLSRDEMLDDISLYWLTDSGASSSRFYWENNNNNFSAAAQKTADIKVPVAITVFPHEIYRAPKVWSQRAYPSLA YFSEVSKGGHFAAWEQPQLFSEELREAFRPLRAAAQKTAAQAAR >Mature_444_residues MVALSSGLTWRHCLASSIRVGVLGLAVLAGSSGVWAADPSQAIRPYTIHVDEAKLSDLRKRIADTRWPDKETVGDVSQGV QLAQVQALVKYWGDGYDWRKAEAKLNALPEFVTTIDGVDIQFIHVRSRNPNAMPLILTHGWPGSQFEFLKTIGPLTDPVA YGGKVEDSFDVVIPSIPGHGFSGKPTELGWGPDRVAKAWDVLMTRLGYSHYVSQGGDHGSVISDALGRLAPPGLLGIHLN MPATVPPELVKPINSGDPAPAGLTAPEVTAFNSLSQFFGRNAAYGAMMVTRPQTIGYLLADSPAGTAAWMYEKFAAWTDS DGQPEKVLSRDEMLDDISLYWLTDSGASSSRFYWENNNNNFSAAAQKTADIKVPVAITVFPHEIYRAPKVWSQRAYPSLA YFSEVSKGGHFAAWEQPQLFSEELREAFRPLRAAAQKTAAQAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=407, Percent_Identity=34.6437346437346, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI209862837, Length=407, Percent_Identity=34.6437346437346, Blast_Score=258, Evalue=7e-69, Organism=Caenorhabditis elegans, GI17564944, Length=409, Percent_Identity=33.0073349633252, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI193207462, Length=415, Percent_Identity=25.7831325301205, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI24655327, Length=408, Percent_Identity=32.1078431372549, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI20130139, Length=466, Percent_Identity=29.3991416309013, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI19922580, Length=404, Percent_Identity=27.2277227722772, Blast_Score=162, Evalue=5e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 48342; Mature: 48342
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALSSGLTWRHCLASSIRVGVLGLAVLAGSSGVWAADPSQAIRPYTIHVDEAKLSDLRK CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH RIADTRWPDKETVGDVSQGVQLAQVQALVKYWGDGYDWRKAEAKLNALPEFVTTIDGVDI HHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE QFIHVRSRNPNAMPLILTHGWPGSQFEFLKTIGPLTDPVAYGGKVEDSFDVVIPSIPGHG EEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCCCC FSGKPTELGWGPDRVAKAWDVLMTRLGYSHYVSQGGDHGSVISDALGRLAPPGLLGIHLN CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEC MPATVPPELVKPINSGDPAPAGLTAPEVTAFNSLSQFFGRNAAYGAMMVTRPQTIGYLLA CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEE DSPAGTAAWMYEKFAAWTDSDGQPEKVLSRDEMLDDISLYWLTDSGASSSRFYWENNNNN CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCC FSAAAQKTADIKVPVAITVFPHEIYRAPKVWSQRAYPSLAYFSEVSKGGHFAAWEQPQLF EEHHHHCCCCEEEEEEEEECCHHHHHCCHHHHHCCCCHHHHHHHHCCCCCEECCCCCHHH SEELREAFRPLRAAAQKTAAQAAR HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVALSSGLTWRHCLASSIRVGVLGLAVLAGSSGVWAADPSQAIRPYTIHVDEAKLSDLRK CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH RIADTRWPDKETVGDVSQGVQLAQVQALVKYWGDGYDWRKAEAKLNALPEFVTTIDGVDI HHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE QFIHVRSRNPNAMPLILTHGWPGSQFEFLKTIGPLTDPVAYGGKVEDSFDVVIPSIPGHG EEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCCCC FSGKPTELGWGPDRVAKAWDVLMTRLGYSHYVSQGGDHGSVISDALGRLAPPGLLGIHLN CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEC MPATVPPELVKPINSGDPAPAGLTAPEVTAFNSLSQFFGRNAAYGAMMVTRPQTIGYLLA CCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEE DSPAGTAAWMYEKFAAWTDSDGQPEKVLSRDEMLDDISLYWLTDSGASSSRFYWENNNNN CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCC FSAAAQKTADIKVPVAITVFPHEIYRAPKVWSQRAYPSLAYFSEVSKGGHFAAWEQPQLF EEHHHHCCCCEEEEEEEEECCHHHHHCCHHHHHCCCCHHHHHHHHCCCCCEECCCCCHHH SEELREAFRPLRAAAQKTAAQAAR HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]