| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is qor [H]
Identifier: 77458479
GI number: 77458479
Start: 2584750
End: 2585733
Strand: Direct
Name: qor [H]
Synonym: Pfl01_2252
Alternate gene names: 77458479
Gene position: 2584750-2585733 (Clockwise)
Preceding gene: 77458475
Following gene: 77458481
Centisome position: 40.15
GC content: 61.89
Gene sequence:
>984_bases ATGACAGGGCAAAACATCATGAAAGCAGTAGTCATCCAGGCCTTTGGCGGGCCTGAAGTGTTGACGGTACACGACATTCA ACTGGCAGAACCGGGGCCCGGACAGGTCGTGGTCAAGGTCATGGCGGCAGGTATCAATTTCATGGACACCGGTGCCCGAC GCGGGCTCGGTGCCGCGTGGGAGCTGCCTTTGACACTGGGTGCAGAAGGCGCCGGCGTGGTTCTGGCCAGCGGCCCGCAG GTGACGGAATTCGCGGTCGGTGCCCGCGTGGCCTGGCATTACGTACCGGGCAGCTACGCCGAACAGGTGATCGCCCCGGT CAGCCAGTTGGTGCCGTTGCCGGACGATATCGACTTCAGCACCGCTGCCAGCCTGATGATGCAGGGCCTGACTGCCAGCA ATCTGGTGGACAAGGTGCATGCGATCCAGCCGGGTGACGTGGCCTTCGTGCACGCCGCGGCGGGGGGCGTGGGGCTGATG CTGACTCAGATGATCAAACTGCGGGGCGGCAAAGTCATTGGCCGGGTGTCCCATGCCGACAAAGTGGAGGCGGTGCTCGC GGCCGGGGCTGACTATGTCGTGATCGGGCGAGCGCAAAACATTGCCGGACAGGTCATGCGCCTGACCGAGGGGCAGCGGG TGAATGTGGTGTACGACGGCACGGGCGCGGAAGGTTTCGCCGACTCGCTGGAGATGTTGGACTACTTCGGCACCCTGGCC TTGTACGGACCGTTCATGAATCCGACACCGCCGATCGATATCTTCAGCATGCCGCGCAGCATCAAGCTGACGTATCCCTC GGTCATGCACTACGTGCGCGATCGCGAGGTGCTGCTGGAAAAATCCCGGCAACTGTTCGCGTGGGTCAGCACCGGCAAAC TGAAAACCTTCATCGGCAAGCGTTATTCGCTGGACGAAGCACAACAGGCCCATATTGATATCGAGTCGCGCAACACGACG GGCAAGCTGATCATCGTCCCTTAG
Upstream 100 bases:
>100_bases CGCAGCCTAGGCCCCGGTTTCAACGTCCTTCGACGTTGAGTGAAAGCAACGTGACGTCCGCGCTCCTGCGACCTGAAAGG CAGCAGGACCGGTCGTCCCG
Downstream 100 bases:
>100_bases TGCCACGCCAGATCAGCAGGGCCGCCAACACCTGGCTACCGGCGAAAAACGTGAACAGGTGTTGTGCGGTCCATCCGGCA TCCAGCAGAAAACCGGCGAC
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTGQNIMKAVVIQAFGGPEVLTVHDIQLAEPGPGQVVVKVMAAGINFMDTGARRGLGAAWELPLTLGAEGAGVVLASGPQ VTEFAVGARVAWHYVPGSYAEQVIAPVSQLVPLPDDIDFSTAASLMMQGLTASNLVDKVHAIQPGDVAFVHAAAGGVGLM LTQMIKLRGGKVIGRVSHADKVEAVLAAGADYVVIGRAQNIAGQVMRLTEGQRVNVVYDGTGAEGFADSLEMLDYFGTLA LYGPFMNPTPPIDIFSMPRSIKLTYPSVMHYVRDREVLLEKSRQLFAWVSTGKLKTFIGKRYSLDEAQQAHIDIESRNTT GKLIIVP
Sequences:
>Translated_327_residues MTGQNIMKAVVIQAFGGPEVLTVHDIQLAEPGPGQVVVKVMAAGINFMDTGARRGLGAAWELPLTLGAEGAGVVLASGPQ VTEFAVGARVAWHYVPGSYAEQVIAPVSQLVPLPDDIDFSTAASLMMQGLTASNLVDKVHAIQPGDVAFVHAAAGGVGLM LTQMIKLRGGKVIGRVSHADKVEAVLAAGADYVVIGRAQNIAGQVMRLTEGQRVNVVYDGTGAEGFADSLEMLDYFGTLA LYGPFMNPTPPIDIFSMPRSIKLTYPSVMHYVRDREVLLEKSRQLFAWVSTGKLKTFIGKRYSLDEAQQAHIDIESRNTT GKLIIVP >Mature_326_residues TGQNIMKAVVIQAFGGPEVLTVHDIQLAEPGPGQVVVKVMAAGINFMDTGARRGLGAAWELPLTLGAEGAGVVLASGPQV TEFAVGARVAWHYVPGSYAEQVIAPVSQLVPLPDDIDFSTAASLMMQGLTASNLVDKVHAIQPGDVAFVHAAAGGVGLML TQMIKLRGGKVIGRVSHADKVEAVLAAGADYVVIGRAQNIAGQVMRLTEGQRVNVVYDGTGAEGFADSLEMLDYFGTLAL YGPFMNPTPPIDIFSMPRSIKLTYPSVMHYVRDREVLLEKSRQLFAWVSTGKLKTFIGKRYSLDEAQQAHIDIESRNTTG KLIIVP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=330, Percent_Identity=29.3939393939394, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI13236495, Length=330, Percent_Identity=29.3939393939394, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI194239676, Length=329, Percent_Identity=29.1793313069909, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI24308257, Length=348, Percent_Identity=27.5862068965517, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI18379349, Length=342, Percent_Identity=26.3157894736842, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI22538446, Length=337, Percent_Identity=26.4094955489614, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI22538444, Length=337, Percent_Identity=26.4094955489614, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI47519420, Length=359, Percent_Identity=26.1838440111421, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI28557745, Length=223, Percent_Identity=28.6995515695067, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1790485, Length=319, Percent_Identity=35.423197492163, Blast_Score=174, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17507255, Length=321, Percent_Identity=27.4143302180685, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17556000, Length=251, Percent_Identity=27.8884462151394, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=324, Percent_Identity=31.7901234567901, Blast_Score=160, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34842; Mature: 34711
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQNIMKAVVIQAFGGPEVLTVHDIQLAEPGPGQVVVKVMAAGINFMDTGARRGLGAAW CCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCCCCCCEE ELPLTLGAEGAGVVLASGPQVTEFAVGARVAWHYVPGSYAEQVIAPVSQLVPLPDDIDFS ECCEEECCCCCEEEEECCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHH TAASLMMQGLTASNLVDKVHAIQPGDVAFVHAAAGGVGLMLTQMIKLRGGKVIGRVSHAD HHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHH KVEAVLAAGADYVVIGRAQNIAGQVMRLTEGQRVNVVYDGTGAEGFADSLEMLDYFGTLA HHHHHHHCCCCEEEEECCCHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LYGPFMNPTPPIDIFSMPRSIKLTYPSVMHYVRDREVLLEKSRQLFAWVSTGKLKTFIGK HCCCCCCCCCCEEHCCCCCEEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHCC RYSLDEAQQAHIDIESRNTTGKLIIVP CCCCCCHHHHEEEEECCCCCCCEEEEC >Mature Secondary Structure TGQNIMKAVVIQAFGGPEVLTVHDIQLAEPGPGQVVVKVMAAGINFMDTGARRGLGAAW CCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCCCCCCEE ELPLTLGAEGAGVVLASGPQVTEFAVGARVAWHYVPGSYAEQVIAPVSQLVPLPDDIDFS ECCEEECCCCCEEEEECCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHH TAASLMMQGLTASNLVDKVHAIQPGDVAFVHAAAGGVGLMLTQMIKLRGGKVIGRVSHAD HHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHH KVEAVLAAGADYVVIGRAQNIAGQVMRLTEGQRVNVVYDGTGAEGFADSLEMLDYFGTLA HHHHHHHCCCCEEEEECCCHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LYGPFMNPTPPIDIFSMPRSIKLTYPSVMHYVRDREVLLEKSRQLFAWVSTGKLKTFIGK HCCCCCCCCCCEEHCCCCCEEEEECHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHCC RYSLDEAQQAHIDIESRNTTGKLIIVP CCCCCCHHHHEEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]